Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:08:15 (1700277): wrapper (7.7.26015): starting
20:08:15 (1700277): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 20:08:15] Arguments: --nthreads 4
[2026-03-05 20:08:15] Threads: 4
[2026-03-05 20:08:15] Checking for CVMFS
[2026-03-05 20:08:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 20:08:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 20:08:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 20:08:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 20:08:16] 2.9.2.0 3074 10182 99924 156930 3 8 27891625 36864000 0 130560 0 4330871 99.983 377621 13900 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-05 20:08:16] CVMFS is ok
[2026-03-05 20:08:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 20:08:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 20:08:16] Further information can be found at the LHC@home message board.
[2026-03-05 20:08:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 20:08:16] Checking for apptainer binary...
[2026-03-05 20:08:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 20:08:16] Running /usr/bin/apptainer --version
[2026-03-05 20:08:16] apptainer version 1.4.1-1.1
[2026-03-05 20:08:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 20:08:16] thA314
[2026-03-05 20:08:16] apptainer works
[2026-03-05 20:08:16] Set ATHENA_PROC_NUMBER=4
[2026-03-05 20:08:16] Set ATHENA_CORE_NUMBER=4
[2026-03-05 20:08:16] Starting ATLAS job with PandaID=7038548246
[2026-03-05 20:08:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 21:16:56]  *** The last 200 lines of the pilot log: ***
[2026-03-05 21:16:56] 2026-03-05 20:16:25,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 21:16:56] 2026-03-05 20:16:25,453 | INFO     | **************************************
[2026-03-05 21:16:56] 2026-03-05 20:16:25,453 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 21:16:56] 2026-03-05 20:16:25,453 | INFO     | **************************************
[2026-03-05 21:16:56] 2026-03-05 20:16:25,453 | INFO     | 
[2026-03-05 21:16:56] 2026-03-05 20:16:25,454 | INFO     | architecture information:
[2026-03-05 21:16:56] 2026-03-05 20:16:25,454 | INFO     | executing command: cat /etc/os-release
[2026-03-05 21:16:56] 2026-03-05 20:16:25,468 | INFO     | cat /etc/os-release:
[2026-03-05 21:16:56] NAME="CentOS Linux"
[2026-03-05 21:16:56] VERSION="7 (Core)"
[2026-03-05 21:16:56] ID="centos"
[2026-03-05 21:16:56] ID_LIKE="rhel fedora"
[2026-03-05 21:16:56] VERSION_ID="7"
[2026-03-05 21:16:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 21:16:56] ANSI_COLOR="0;31"
[2026-03-05 21:16:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 21:16:56] HOME_URL="https://www.centos.org/"
[2026-03-05 21:16:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 21:16:56] 
[2026-03-05 21:16:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 21:16:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 21:16:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 21:16:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 21:16:56] 
[2026-03-05 21:16:56] 2026-03-05 20:16:25,468 | INFO     | **************************************
[2026-03-05 21:16:56] 2026-03-05 20:16:25,972 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | INFO     | sufficient remaining disk space (228207886336 B)
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | INFO     | update_server=False
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 21:16:56] 2026-03-05 20:16:25,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 21:16:56] 2026-03-05 20:16:26,379 | INFO     | all payload control threads have been joined
[2026-03-05 21:16:56] 2026-03-05 20:16:26,428 | WARNING  | process 1708899 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 21:16:56] 2026-03-05 20:16:26,468 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 21:16:56] 2026-03-05 20:16:26,516 | INFO     | all job control threads have been joined
[2026-03-05 21:16:56] 2026-03-05 20:16:26,520 | INFO     | number of running child processes to parent process 1708899: 1
[2026-03-05 21:16:56] 2026-03-05 20:16:26,520 | INFO     | maximum number of monitored processes: 6
[2026-03-05 21:16:56] 2026-03-05 20:16:26,520 | INFO     | aborting job monitoring since job object (job id=7038548246) has expired
[2026-03-05 21:16:56] 2026-03-05 20:16:26,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 21:16:56] 2026-03-05 20:16:26,520 | INFO     | will abort loop
[2026-03-05 21:16:56] 2026-03-05 20:16:26,585 | INFO     | all data control threads have been joined
[2026-03-05 21:16:56] 2026-03-05 20:16:26,994 | INFO     | [job] retrieve thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:26,994 | INFO     | [job] queue monitor thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,243 | INFO     | [payload] validate_post thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,385 | INFO     | [payload] control thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 21:16:56] 2026-03-05 20:16:27,522 | INFO     | [job] control thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,525 | INFO     | [job] job monitor thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,590 | INFO     | [data] control thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,805 | INFO     | [payload] failed_post thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:27,994 | INFO     | [data] copytool_out thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:28,125 | INFO     | [job] validate thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:28,235 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:28,296 | INFO     | [data] copytool_in thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:28,303 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:28,338 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:31,473 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:33,184 | INFO     | [monitor] cgroup control has ended
[2026-03-05 21:16:56] 2026-03-05 20:16:36,209 | INFO     | job.realtimelogging is not enabled
[2026-03-05 21:16:56] 2026-03-05 20:16:37,215 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 21:16:56] 2026-03-05 20:16:38,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650495391552)>', '<ExcThread(monitor, started 140649542170368)>']
[2026-03-05 21:16:56] 2026-03-05 20:16:43,106 | INFO     | all workflow threads have been joined
[2026-03-05 21:16:56] 2026-03-05 20:16:43,106 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 21:16:56] 2026-03-05 20:16:43,106 | INFO     | traces error code: 0
[2026-03-05 21:16:56] 2026-03-05 20:16:43,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 21:16:56] 2026-03-05 20:16:56,224 | INFO     | PID=1704384 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 21:16:56] 2026-03-05 20:16:56,224 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 21:16:56] 2026-03-05 20:16:56,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 21:16:56] 2026-03-05 20:16:56,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 21:16:56] 2026-03-05 20:16:56,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 21:16:56] 2026-03-05 20:16:56,225 | INFO     | [monitor] control thread has ended
[2026-03-05 21:16:56] 2026-03-05 20:16:56,302 [wrapper] ==== pilot stdout END ====
[2026-03-05 21:16:56] 2026-03-05 20:16:56,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 21:16:56] 2026-03-05 20:16:56,310 [wrapper] pilotpid: 1704384
[2026-03-05 21:16:56] 2026-03-05 20:16:56,314 [wrapper] Pilot exit status: 0
[2026-03-05 21:16:56] 2026-03-05 20:16:56,326 [wrapper] pandaids: 7038548246
[2026-03-05 21:16:56] 2026-03-05 20:16:56,349 [wrapper] cleanup supervisor_pilot 1715304 1704385
[2026-03-05 21:16:56] 2026-03-05 20:16:56,353 [wrapper] Test setup, not cleaning
[2026-03-05 21:16:56] 2026-03-05 20:16:56,357 [wrapper] apfmon messages muted
[2026-03-05 21:16:56] 2026-03-05 20:16:56,361 [wrapper] ==== wrapper stdout END ====
[2026-03-05 21:16:56] 2026-03-05 20:16:56,365 [wrapper] ==== wrapper stderr END ====
[2026-03-05 21:16:56]  *** Error codes and diagnostics ***
[2026-03-05 21:16:56]     "exeErrorCode": 0,
[2026-03-05 21:16:56]     "exeErrorDiag": "",
[2026-03-05 21:16:56]     "pilotErrorCode": 0,
[2026-03-05 21:16:56]     "pilotErrorDiag": "",
[2026-03-05 21:16:56]  *** Listing of results directory ***
[2026-03-05 21:16:56] total 616272
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc      5111 Mar  5 02:43 queuedata.json
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc    584627 Mar  5 02:43 pilot3.tar.gz
[2026-03-05 21:16:56] -rwx------ 1 boinc boinc     36322 Mar  5 02:43 runpilot2-wrapper.sh
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc       100 Mar  5 20:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 21:16:56] -rwxr-xr-x 1 boinc boinc      7986 Mar  5 20:08 run_atlas
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc       105 Mar  5 20:08 job.xml
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc 437379727 Mar  5 20:08 EVNT.46701403._001075.pool.root.1
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc    597957 Mar  5 20:08 input.tar.gz
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc     15845 Mar  5 20:08 start_atlas.sh
[2026-03-05 21:16:56] drwxrwx--x 2 boinc boinc      4096 Mar  5 20:08 shared
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc         0 Mar  5 20:08 boinc_setup_complete
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc      6376 Mar  5 20:08 init_data.xml
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc         0 Mar  5 20:08 boinc_lockfile
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc      2561 Mar  5 20:08 pandaJob.out
[2026-03-05 21:16:56] -rw------- 1 boinc boinc    998478 Mar  5 20:08 agis_schedconf.cvmfs.json
[2026-03-05 21:16:56] -rw------- 1 boinc boinc   1521291 Mar  5 20:08 agis_ddmendpoints.agis.ALL.json
[2026-03-05 21:16:56] -rw------- 1 boinc boinc       419 Mar  5 20:08 workernode_map.json
[2026-03-05 21:16:56] drwx------ 5 boinc boinc      4096 Mar  5 20:08 pilot3
[2026-03-05 21:16:56] -rw------- 1 boinc boinc 187955763 Mar  5 21:16 HITS.48955010._003748.pool.root.1
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc       530 Mar  5 21:16 boinc_task_state.xml
[2026-03-05 21:16:56] -rw------- 1 boinc boinc      1020 Mar  5 21:16 memory_monitor_summary.json
[2026-03-05 21:16:56] -rw------- 1 boinc boinc    295871 Mar  5 21:16 log.48955010._003748.job.log.tgz.1
[2026-03-05 21:16:56] -rw------- 1 boinc boinc      6301 Mar  5 21:16 heartbeat.json
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc      8192 Mar  5 21:16 boinc_mmap_file
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc        27 Mar  5 21:16 wrapper_checkpoint.txt
[2026-03-05 21:16:56] -rw------- 1 boinc boinc       747 Mar  5 21:16 pilotlog.txt
[2026-03-05 21:16:56] -rw------- 1 boinc boinc        95 Mar  5 21:16 pilot_heartbeat.json
[2026-03-05 21:16:56] -rw------- 1 boinc boinc    606622 Mar  5 21:16 log.48955010._003748.job.log.1
[2026-03-05 21:16:56] -rw------- 1 boinc boinc       357 Mar  5 21:16 output.list
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc       620 Mar  5 21:16 runtime_log
[2026-03-05 21:16:56] -rw------- 1 boinc boinc    921600 Mar  5 21:16 result.tar.gz
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc      8896 Mar  5 21:16 runtime_log.err
[2026-03-05 21:16:56] -rw------- 1 boinc boinc       657 Mar  5 21:16 1I7NDmTvCI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTQKLDmSaEhFo.diag
[2026-03-05 21:16:56] -rw-r--r-- 1 boinc boinc     10171 Mar  5 21:16 stderr.txt
[2026-03-05 21:16:56] HITS file was successfully produced:
[2026-03-05 21:16:56] -rw------- 1 boinc boinc 187955763 Mar  5 21:16 shared/HITS.pool.root.1
[2026-03-05 21:16:56]  *** Contents of shared directory: ***
[2026-03-05 21:16:56] total 612188
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc 437379727 Mar  5 20:08 ATLAS.root_0
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc    597957 Mar  5 20:08 input.tar.gz
[2026-03-05 21:16:56] -rw-r--r-- 2 boinc boinc     15845 Mar  5 20:08 start_atlas.sh
[2026-03-05 21:16:56] -rw------- 1 boinc boinc 187955763 Mar  5 21:16 HITS.pool.root.1
[2026-03-05 21:16:56] -rw------- 1 boinc boinc    921600 Mar  5 21:16 result.tar.gz
21:16:57 (1700277): run_atlas exited; CPU time 15205.053819
21:16:57 (1700277): called boinc_finish(0)

</stderr_txt>
]]>

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