Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:15 (2664192): wrapper (7.7.26015): starting
18:33:15 (2664192): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 18:33:15] Arguments: --nthreads 4
[2026-03-09 18:33:15] Threads: 4
[2026-03-09 18:33:15] Checking for CVMFS
[2026-03-09 18:33:15] No cvmfs_config command found, will try listing directly
[2026-03-09 18:33:15] CVMFS is ok
[2026-03-09 18:33:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 18:33:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 18:33:15] Further information can be found at the LHC@home message board.
[2026-03-09 18:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 18:33:15] Checking for apptainer binary...
[2026-03-09 18:33:15] which: no apptainer in ((null))
[2026-03-09 18:33:15] apptainer is not installed, using version from CVMFS
[2026-03-09 18:33:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 18:33:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-09 18:33:17] apptainer works
[2026-03-09 18:33:17] Set ATHENA_PROC_NUMBER=4
[2026-03-09 18:33:17] Set ATHENA_CORE_NUMBER=4
[2026-03-09 18:33:17] Starting ATLAS job with PandaID=7038548172
[2026-03-09 18:33:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 21:23:39]  *** The last 200 lines of the pilot log: ***
[2026-03-09 21:23:39] 2026-03-09 20:22:55,099 | INFO     | job 7038548172 has state=finished
[2026-03-09 21:23:39] 2026-03-09 20:22:55,099 | INFO     | preparing for final server update for job 7038548172 in state='finished'
[2026-03-09 21:23:39] 2026-03-09 20:22:55,101 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7038548172/jobReport.json
[2026-03-09 21:23:39] 2026-03-09 20:22:55,104 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/5/workernode_map.json
[2026-03-09 21:23:39] 2026-03-09 20:22:55,104 | INFO     | this job has now completed (state=finished)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,104 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,104 | INFO     | log transfer has been attempted: DONE
[2026-03-09 21:23:39] 2026-03-09 20:22:55,105 | INFO     | job 7038548172 has finished - writing final server update
[2026-03-09 21:23:39] 2026-03-09 20:22:55,105 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2091634/.job.ad'
[2026-03-09 21:23:39] 2026-03-09 20:22:55,105 | INFO     | total number of processed events: 400 (read)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,128 | INFO     | using path: /var/lib/boinc/var/slot28/slots/5/PanDA_Pilot-7038548172/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,129 | INFO     | extracted standard info from prmon json
[2026-03-09 21:23:39] 2026-03-09 20:22:55,129 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 21:23:39] 2026-03-09 20:22:55,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 21:23:39] 2026-03-09 20:22:55,129 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 21:23:39] 2026-03-09 20:22:55,129 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 21:23:39] 2026-03-09 20:22:55,132 | INFO     | fitting pss+swap vs Time
[2026-03-09 21:23:39] 2026-03-09 20:22:55,133 | INFO     | sum of square deviations: 1367692530.9756165
[2026-03-09 21:23:39] 2026-03-09 20:22:55,134 | INFO     | sum of deviations: 13881090318.682936
[2026-03-09 21:23:39] 2026-03-09 20:22:55,134 | INFO     | mean x: 1773082778.512195
[2026-03-09 21:23:39] 2026-03-09 20:22:55,134 | INFO     | mean y: 2289040.4085365855
[2026-03-09 21:23:39] 2026-03-09 20:22:55,134 | INFO     | intersect: -17993219185.02014
[2026-03-09 21:23:39] 2026-03-09 20:22:55,134 | INFO     | chi2: 3.1122843859962557
[2026-03-09 21:23:39] 2026-03-09 20:22:55,135 | INFO     | sum of square deviations: 1246369935.9748404
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | sum of deviations: 22931481177.786156
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | mean x: 1773082626.0125787
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | mean y: 2300119.106918239
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | intersect: -32619965302.648136
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | chi2: 2.4335801455369914
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | current chi2=2.4335801455369914 (change=21.80726939713795 %)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,136 | INFO     | right removable region: 158
[2026-03-09 21:23:39] 2026-03-09 20:22:55,137 | INFO     | sum of square deviations: 1246368715.9748404
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | sum of deviations: -19698347950.213837
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | mean x: 1773082931.0125787
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | mean y: 2330858.106918239
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | intersect: 28025181618.086853
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | chi2: 0.7545406246668278
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | current chi2=0.7545406246668278 (change=75.75605146940015 %)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,138 | INFO     | sum of square deviations: 1132440388.4740286
[2026-03-09 21:23:39] 2026-03-09 20:22:55,139 | INFO     | sum of deviations: -17995666764.51947
[2026-03-09 21:23:39] 2026-03-09 20:22:55,139 | INFO     | mean x: 1773083083.512987
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | mean y: 2328530.25974026
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | intersect: 28178480353.758686
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | chi2: 0.7476120122744818
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | current chi2=0.7476120122744818 (change=0.9182557129253792 %)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | left removable region: 20
[2026-03-09 21:23:39] 2026-03-09 20:22:55,140 | INFO     | sum of square deviations: 814878534.5
[2026-03-09 21:23:39] 2026-03-09 20:22:55,141 | INFO     | sum of deviations: -3402921935.4999995
[2026-03-09 21:23:39] 2026-03-09 20:22:55,141 | INFO     | mean x: 1773083205.5
[2026-03-09 21:23:39] 2026-03-09 20:22:55,141 | INFO     | mean y: 2333628.5434782607
[2026-03-09 21:23:39] 2026-03-09 20:22:55,141 | INFO     | intersect: 7406705541.671351
[2026-03-09 21:23:39] 2026-03-09 20:22:55,142 | INFO     | chi2: 0.013107653880558344
[2026-03-09 21:23:39] 2026-03-09 20:22:55,142 | INFO     | current memory leak: -4.18 B/s (using 138 data points, chi2=0.01)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,142 | INFO     | could have reported an average CPU frequency of 2697 MHz (9 samples)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,142 | INFO     | ..............................
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . Timing measurements:
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . get job = 0 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . initial setup = 41 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . payload setup = 56 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . stage-in = 0 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . payload execution = 9995 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . stage-out = 0 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | . log creation = 0 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,143 | INFO     | ..............................
[2026-03-09 21:23:39] 2026-03-09 20:22:55,229 | INFO     | 
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | job summary report
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | --------------------------------------------------
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | PanDA job id: 7038548172
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | task id: 48955010
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | errors: (none)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | pilot state: finished 
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | transexitcode: 0
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | exeerrorcode: 0
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | exeerrordiag: 
[2026-03-09 21:23:39] 2026-03-09 20:22:55,230 | INFO     | exitcode: 0
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | exitmsg: OK
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | cpuconsumptiontime: 35615 s
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | nevents: 400
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | neventsw: 0
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | pid: 2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | pgrp: 2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | corecount: 4
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | event service: False
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | sizes: {0: 2279751, 1: 2280212, 10056: 2309161, 10057: 2318439}
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | --------------------------------------------------
[2026-03-09 21:23:39] 2026-03-09 20:22:55,231 | INFO     | 
[2026-03-09 21:23:39] 2026-03-09 20:22:55,232 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/5
[2026-03-09 21:23:39] 2026-03-09 20:22:55,267 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,267 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,267 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,267 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,267 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,268 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | job 7038548172 has completed (purged errors)
[2026-03-09 21:23:39] 2026-03-09 20:22:55,269 | INFO     | overall cleanup function is called
[2026-03-09 21:23:39] 2026-03-09 20:22:56,278 | INFO     | --- collectZombieJob: --- 10, [2675400]
[2026-03-09 21:23:39] 2026-03-09 20:22:56,278 | INFO     | zombie collector waiting for pid 2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:56,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 21:23:39] 2026-03-09 20:22:56,278 | INFO     | collected zombie processes
[2026-03-09 21:23:39] 2026-03-09 20:22:56,278 | INFO     | will attempt to kill all subprocesses of pid=2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:57,069 | INFO     | process IDs to be killed: [2675400] (in reverse order)
[2026-03-09 21:23:39] 2026-03-09 20:22:57,489 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 21:23:39] 2026-03-09 20:22:57,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 21:23:39] 2026-03-09 20:22:57,519 | INFO     | did not find any defunct processes belonging to 2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:57,548 | INFO     | did not find any defunct processes belonging to 2675400
[2026-03-09 21:23:39] 2026-03-09 20:22:57,549 | INFO     | ready for new job
[2026-03-09 21:23:39] 2026-03-09 20:22:57,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 21:23:39] 2026-03-09 20:22:57,551 | INFO     | **************************************
[2026-03-09 21:23:39] 2026-03-09 20:22:57,551 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 21:23:39] 2026-03-09 20:22:57,551 | INFO     | **************************************
[2026-03-09 21:23:39] 2026-03-09 20:22:57,551 | INFO     | 
[2026-03-09 21:23:39] 2026-03-09 20:22:57,560 | INFO     | architecture information:
[2026-03-09 21:23:39] 2026-03-09 20:22:57,560 | INFO     | executing command: cat /etc/os-release
[2026-03-09 21:23:39] 2026-03-09 20:22:57,607 | INFO     | cat /etc/os-release:
[2026-03-09 21:23:39] NAME="CentOS Linux"
[2026-03-09 21:23:39] VERSION="7 (Core)"
[2026-03-09 21:23:39] ID="centos"
[2026-03-09 21:23:39] ID_LIKE="rhel fedora"
[2026-03-09 21:23:39] VERSION_ID="7"
[2026-03-09 21:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 21:23:39] ANSI_COLOR="0;31"
[2026-03-09 21:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 21:23:39] HOME_URL="https://www.centos.org/"
[2026-03-09 21:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 21:23:39] 
[2026-03-09 21:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 21:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 21:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 21:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 21:23:39] 
[2026-03-09 21:23:39] 2026-03-09 20:22:57,608 | INFO     | **************************************
[2026-03-09 21:23:39] 2026-03-09 20:22:58,110 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/5
[2026-03-09 21:23:39] 2026-03-09 20:22:58,138 | INFO     | sufficient remaining disk space (56751030272 B)
[2026-03-09 21:23:39] 2026-03-09 20:22:58,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 21:23:39] 2026-03-09 20:22:58,139 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 21:23:39] 2026-03-09 20:22:58,139 | INFO     | update_server=False
[2026-03-09 21:23:39] 2026-03-09 20:22:58,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 21:23:39] 2026-03-09 20:22:58,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 21:23:39] 2026-03-09 20:22:58,393 | INFO     | all payload control threads have been joined
[2026-03-09 21:23:39] 2026-03-09 20:22:58,696 | INFO     | all data control threads have been joined
[2026-03-09 21:23:39] 2026-03-09 20:22:59,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:23:39] 2026-03-09 20:22:59,044 | INFO     | aborting loop
[2026-03-09 21:23:39] 2026-03-09 20:22:59,144 | INFO     | [job] retrieve thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,176 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,398 | INFO     | [payload] control thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,422 | INFO     | all job control threads have been joined
[2026-03-09 21:23:39] 2026-03-09 20:22:59,684 | INFO     | [data] copytool_in thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,701 | INFO     | [data] control thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,712 | INFO     | [job] validate thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,791 | INFO     | [payload] failed_post thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:22:59,916 | INFO     | [payload] validate_post thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:00,049 | INFO     | [job] job monitor thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:00,145 | INFO     | [data] copytool_out thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:00,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 21:23:39] 2026-03-09 20:23:00,427 | INFO     | [job] control thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:00,555 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:00,612 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:01,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 21:23:39] 2026-03-09 20:23:01,245 | INFO     | [job] queue monitor thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:05,110 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:08,865 | INFO     | job.realtimelogging is not enabled
[2026-03-09 21:23:39] 2026-03-09 20:23:09,870 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 21:23:39] 2026-03-09 20:23:27,711 | INFO     | PID=2668983 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 21:23:39] 2026-03-09 20:23:27,711 | INFO     | .. there are 30 such processes running
[2026-03-09 21:23:39] 2026-03-09 20:23:27,714 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 21:23:39] 2026-03-09 20:23:27,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 21:23:39] 2026-03-09 20:23:27,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 21:23:39] 2026-03-09 20:23:32,768 | INFO     | [monitor] cgroup control has ended
[2026-03-09 21:23:39] 2026-03-09 20:23:34,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22846946637632)>', '<ExcThread(monitor, started 22846708659968)>']
[2026-03-09 21:23:39] 2026-03-09 20:23:34,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 21:23:39] 2026-03-09 20:23:34,750 | INFO     | [monitor] control thread has ended
[2026-03-09 21:23:39] 2026-03-09 20:23:39,385 | INFO     | all workflow threads have been joined
[2026-03-09 21:23:39] 2026-03-09 20:23:39,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 21:23:39] 2026-03-09 20:23:39,385 | INFO     | traces error code: 0
[2026-03-09 21:23:39] 2026-03-09 20:23:39,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 21:23:39] 2026-03-09 20:23:39,545 [wrapper] ==== pilot stdout END ====
[2026-03-09 21:23:39] 2026-03-09 20:23:39,550 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 21:23:39] 2026-03-09 20:23:39,555 [wrapper] pilotpid: 2668983
[2026-03-09 21:23:39] 2026-03-09 20:23:39,559 [wrapper] Pilot exit status: 0
[2026-03-09 21:23:39] 2026-03-09 20:23:39,575 [wrapper] pandaids: 7038548172
[2026-03-09 21:23:39] 2026-03-09 20:23:39,770 [wrapper] cleanup supervisor_pilot 3062112 2668984
[2026-03-09 21:23:39] 2026-03-09 20:23:39,775 [wrapper] Test setup, not cleaning
[2026-03-09 21:23:39] 2026-03-09 20:23:39,779 [wrapper] apfmon messages muted
[2026-03-09 21:23:39] 2026-03-09 20:23:39,784 [wrapper] ==== wrapper stdout END ====
[2026-03-09 21:23:39] 2026-03-09 20:23:39,788 [wrapper] ==== wrapper stderr END ====
[2026-03-09 21:23:39]  *** Error codes and diagnostics ***
[2026-03-09 21:23:39]     "exeErrorCode": 0,
[2026-03-09 21:23:39]     "exeErrorDiag": "",
[2026-03-09 21:23:39]     "pilotErrorCode": 0,
[2026-03-09 21:23:39]     "pilotErrorDiag": "",
[2026-03-09 21:23:39]  *** Listing of results directory ***
[2026-03-09 21:23:39] total 617756
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc      5111 Mar  5 02:43 queuedata.json
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc    584627 Mar  5 02:43 pilot3.tar.gz
[2026-03-09 21:23:39] -rwx------. 1 boinc boinc     36322 Mar  5 02:43 runpilot2-wrapper.sh
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc       100 Mar  9 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 21:23:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 18:33 run_atlas
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc       105 Mar  9 18:33 job.xml
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc      6617 Mar  9 18:33 init_data.xml
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc 442656213 Mar  9 18:33 EVNT.46701403._001074.pool.root.1
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc    597946 Mar  9 18:33 input.tar.gz
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:33 start_atlas.sh
[2026-03-09 21:23:39] drwxrwx--x. 2 boinc boinc      4096 Mar  9 18:33 shared
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc         0 Mar  9 18:33 boinc_lockfile
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc      2560 Mar  9 18:33 pandaJob.out
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc   1002716 Mar  9 18:34 agis_schedconf.cvmfs.json
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc   1511578 Mar  9 18:34 agis_ddmendpoints.agis.ALL.json
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc       443 Mar  9 18:35 workernode_map.json
[2026-03-09 21:23:39] drwx------. 5 boinc boinc      4096 Mar  9 18:35 pilot3
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc 182528659 Mar  9 21:22 HITS.48955010._003674.pool.root.1
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc       532 Mar  9 21:22 boinc_task_state.xml
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc      1026 Mar  9 21:22 memory_monitor_summary.json
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc    355631 Mar  9 21:22 log.48955010._003674.job.log.tgz.1
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc      6350 Mar  9 21:22 heartbeat.json
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc        95 Mar  9 21:23 pilot_heartbeat.json
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc      8192 Mar  9 21:23 boinc_mmap_file
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc        28 Mar  9 21:23 wrapper_checkpoint.txt
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc      4901 Mar  9 21:23 pilotlog.txt
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc   1375167 Mar  9 21:23 log.48955010._003674.job.log.1
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc       357 Mar  9 21:23 output.list
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc       620 Mar  9 21:23 runtime_log
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc   1751040 Mar  9 21:23 result.tar.gz
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc      9205 Mar  9 21:23 runtime_log.err
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc       665 Mar  9 21:23 hysKDmTvCI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmaPKLDmy3zR3n.diag
[2026-03-09 21:23:39] -rw-r--r--. 1 boinc boinc     21116 Mar  9 21:23 stderr.txt
[2026-03-09 21:23:39] HITS file was successfully produced:
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc 182528659 Mar  9 21:22 shared/HITS.pool.root.1
[2026-03-09 21:23:39]  *** Contents of shared directory: ***
[2026-03-09 21:23:39] total 612856
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc 442656213 Mar  9 18:33 ATLAS.root_0
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc    597946 Mar  9 18:33 input.tar.gz
[2026-03-09 21:23:39] -rw-r--r--. 2 boinc boinc     15845 Mar  9 18:33 start_atlas.sh
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc 182528659 Mar  9 21:22 HITS.pool.root.1
[2026-03-09 21:23:39] -rw-------. 1 boinc boinc   1751040 Mar  9 21:23 result.tar.gz
21:23:40 (2664192): run_atlas exited; CPU time 36176.787145
21:23:40 (2664192): called boinc_finish(0)

</stderr_txt>
]]>

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