Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:35:11 (96662): wrapper (7.7.26015): starting
02:35:11 (96662): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 02:35:11] Arguments: --nthreads 4
[2026-03-05 02:35:11] Threads: 4
[2026-03-05 02:35:11] Checking for CVMFS
[2026-03-05 02:35:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 02:35:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 02:35:11] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 02:35:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 02:35:11] 2.13.3.0 4459 10 49204 156898 1 188 3749020 6144001 2733 130560 0 269619 99.993 4262 1855 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-05 02:35:11] CVMFS is ok
[2026-03-05 02:35:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 02:35:11] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-05 02:35:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-05 02:35:11] Further information can be found at the LHC@home message board.
[2026-03-05 02:35:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 02:35:11] Checking for apptainer binary...
[2026-03-05 02:35:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 02:35:11] Running /usr/bin/apptainer --version
[2026-03-05 02:35:11] apptainer version 1.4.5
[2026-03-05 02:35:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 02:35:11] casi34-debian
[2026-03-05 02:35:11] apptainer works
[2026-03-05 02:35:11] Set ATHENA_PROC_NUMBER=4
[2026-03-05 02:35:11] Set ATHENA_CORE_NUMBER=4
[2026-03-05 02:35:11] Starting ATLAS job with PandaID=7030311798
[2026-03-05 02:35:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 03:51:30]  *** The last 200 lines of the pilot log: ***
[2026-03-05 03:51:30]  guid=359de4ad-02db-4040-8386-8adfdc381dda
[2026-03-05 03:51:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 03:51:30]  is_altstaged=None
[2026-03-05 03:51:30]  is_tar=False
[2026-03-05 03:51:30]  lfn=log.48838596._001114.job.log.tgz.1
[2026-03-05 03:51:30]  mtime=0
[2026-03-05 03:51:30]  protocol_id=None
[2026-03-05 03:51:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 03:51:30]  replicas=None
[2026-03-05 03:51:30]  scope=mc23_13p6TeV
[2026-03-05 03:51:30]  status=None
[2026-03-05 03:51:30]  status_code=0
[2026-03-05 03:51:30]  storage_token=
[2026-03-05 03:51:30]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-7030311798/log.48838596._001114.job.log.tgz.1
[2026-03-05 03:51:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/22/log.48838596._001114.job.log.tgz.1
[2026-03-05 03:51:30]  workdir=None
[2026-03-05 03:51:30] ]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,104 | INFO     | transferring file log.48838596._001114.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-7030311798/log.48838596._001114.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-05 03:51:30] 2026-03-05 02:50:44,104 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-7030311798/log.48838596._001114.job.log.tgz.1 /var/lib/boinc/slots/3/log.48838596._001114.job
[2026-03-05 03:51:30] 2026-03-05 02:50:44,110 | INFO     | adding to output.list: log.48838596._001114.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/22/log.48838596._001114.job.log.tg
[2026-03-05 03:51:30] 2026-03-05 02:50:44,110 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 03:51:30] 2026-03-05 02:50:44,110 | INFO     | summary of transferred files:
[2026-03-05 03:51:30] 2026-03-05 02:50:44,110 | INFO     |  -- lfn=log.48838596._001114.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 03:51:30] 2026-03-05 02:50:44,110 | INFO     | stage-out finished correctly
[2026-03-05 03:51:30] 2026-03-05 02:50:44,142 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 03:51:30] 2026-03-05 02:50:44,173 | INFO     | job 7030311798 has state=finished
[2026-03-05 03:51:30] 2026-03-05 02:50:44,173 | INFO     | preparing for final server update for job 7030311798 in state='finished'
[2026-03-05 03:51:30] 2026-03-05 02:50:44,173 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-7030311798/jobReport.json
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | this job has now completed (state=finished)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | log transfer has been attempted: DONE
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | job 7030311798 has finished - writing final server update
[2026-03-05 03:51:30] 2026-03-05 02:50:44,174 | INFO     | total number of processed events: 400 (read)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7030311798/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | INFO     | extracted standard info from prmon json
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 03:51:30] 2026-03-05 02:50:44,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | fitting pss+swap vs Time
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | sum of square deviations: 93240818.0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | sum of deviations: -3170974956.0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | mean x: 1772676848.0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | mean y: 2414030.1641791044
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | intersect: 60288391895.44866
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | chi2: 0.009830889971226157
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | current memory leak: -34.01 B/s (using 67 data points, chi2=0.01)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,176 | INFO     | could have reported an average CPU frequency of 5052 MHz (6 samples)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | ..............................
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . Timing measurements:
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . get job = 0 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . initial setup = 2 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . payload setup = 1 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . stage-in = 0 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . payload execution = 4511 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . stage-out = 0 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | . log creation = 0 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,177 | INFO     | ..............................
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | 
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | job summary report
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | --------------------------------------------------
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | PanDA job id: 7030311798
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | task id: 48838596
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | errors: (none)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | pilot state: finished 
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | transexitcode: 0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | exeerrorcode: 0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | exeerrordiag: 
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | exitcode: 0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | exitmsg: OK
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | cpuconsumptiontime: 16902 s
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | nevents: 400
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | neventsw: 0
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | pid: 104931
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | pgrp: 104931
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | corecount: 4
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | event service: False
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | sizes: {0: 2294696, 1: 2295814, 11: 2295814, 4517: 2331214}
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | --------------------------------------------------
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | 
[2026-03-05 03:51:30] 2026-03-05 02:50:44,208 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,215 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 03:51:30] 2026-03-05 02:50:44,215 | INFO     | job 7030311798 has completed (purged errors)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,215 | INFO     | overall cleanup function is called
[2026-03-05 03:51:30] 2026-03-05 02:50:44,249 | WARNING  | process 104931 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 03:51:30] 2026-03-05 02:50:44,270 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 03:51:30] 2026-03-05 02:50:44,301 | INFO     | number of running child processes to parent process 104931: 1
[2026-03-05 03:51:30] 2026-03-05 02:50:44,302 | INFO     | maximum number of monitored processes: 6
[2026-03-05 03:51:30] 2026-03-05 02:50:44,302 | INFO     | aborting job monitoring since job object (job id=7030311798) has expired
[2026-03-05 03:51:30] 2026-03-05 02:50:45,217 | INFO     | --- collectZombieJob: --- 10, [104931]
[2026-03-05 03:51:30] 2026-03-05 02:50:45,217 | INFO     | zombie collector waiting for pid 104931
[2026-03-05 03:51:30] 2026-03-05 02:50:45,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 03:51:30] 2026-03-05 02:50:45,218 | INFO     | collected zombie processes
[2026-03-05 03:51:30] 2026-03-05 02:50:45,218 | INFO     | will attempt to kill all subprocesses of pid=104931
[2026-03-05 03:51:30] 2026-03-05 02:50:45,249 | INFO     | process IDs to be killed: [104931] (in reverse order)
[2026-03-05 03:51:30] 2026-03-05 02:50:45,263 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 03:51:30] 2026-03-05 02:50:45,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 03:51:30] 2026-03-05 02:50:45,265 | INFO     | did not find any defunct processes belonging to 104931
[2026-03-05 03:51:30] 2026-03-05 02:50:45,265 | INFO     | did not find any defunct processes belonging to 104931
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | ready for new job
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | **************************************
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | **************************************
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | 
[2026-03-05 03:51:30] 2026-03-05 02:50:45,266 | INFO     | architecture information:
[2026-03-05 03:51:30] 2026-03-05 02:50:45,267 | INFO     | executing command: cat /etc/os-release
[2026-03-05 03:51:30] 2026-03-05 02:50:45,270 | INFO     | cat /etc/os-release:
[2026-03-05 03:51:30] NAME="CentOS Linux"
[2026-03-05 03:51:30] VERSION="7 (Core)"
[2026-03-05 03:51:30] ID="centos"
[2026-03-05 03:51:30] ID_LIKE="rhel fedora"
[2026-03-05 03:51:30] VERSION_ID="7"
[2026-03-05 03:51:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 03:51:30] ANSI_COLOR="0;31"
[2026-03-05 03:51:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 03:51:30] HOME_URL="https://www.centos.org/"
[2026-03-05 03:51:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 03:51:30] 
[2026-03-05 03:51:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 03:51:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 03:51:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 03:51:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 03:51:30] 
[2026-03-05 03:51:30] 2026-03-05 02:50:45,270 | INFO     | **************************************
[2026-03-05 03:51:30] 2026-03-05 02:50:45,773 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | INFO     | sufficient remaining disk space (407131652096 B)
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | INFO     | update_server=False
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 03:51:30] 2026-03-05 02:50:45,777 | INFO     | aborting loop
[2026-03-05 03:51:30] 2026-03-05 02:50:46,412 | INFO     | all job control threads have been joined
[2026-03-05 03:51:30] 2026-03-05 02:50:46,548 | INFO     | all data control threads have been joined
[2026-03-05 03:51:30] 2026-03-05 02:50:46,782 | INFO     | [job] queue monitor thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:46,782 | INFO     | [job] job monitor thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:46,782 | INFO     | [job] retrieve thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,049 | INFO     | all payload control threads have been joined
[2026-03-05 03:51:30] 2026-03-05 02:50:47,145 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 03:51:30] 2026-03-05 02:50:47,413 | INFO     | [job] control thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,549 | INFO     | [data] control thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,693 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,701 | INFO     | [job] validate thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,729 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,839 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,901 | INFO     | [data] copytool_in thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:47,921 | INFO     | [payload] validate_post thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:48,052 | INFO     | [payload] control thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:48,217 | INFO     | [payload] failed_post thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:49,149 | INFO     | [data] copytool_out thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:49,785 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:50:56,345 | INFO     | job.realtimelogging is not enabled
[2026-03-05 03:51:30] 2026-03-05 02:50:57,349 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 03:51:30] 2026-03-05 02:51:16,554 | INFO     | PID=100444 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 03:51:30] 2026-03-05 02:51:16,554 | INFO     | .. there are 4 such processes running
[2026-03-05 03:51:30] 2026-03-05 02:51:16,554 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 03:51:30] 2026-03-05 02:51:16,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 03:51:30] 2026-03-05 02:51:16,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 03:51:30] 2026-03-05 02:51:23,501 | INFO     | [monitor] cgroup control has ended
[2026-03-05 03:51:30] 2026-03-05 02:51:25,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139674486716224)>', '<ExcThread(monitor, started 139673989007104)>']
[2026-03-05 03:51:30] 2026-03-05 02:51:25,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 03:51:30] 2026-03-05 02:51:25,593 | INFO     | [monitor] control thread has ended
[2026-03-05 03:51:30] 2026-03-05 02:51:30,233 | INFO     | all workflow threads have been joined
[2026-03-05 03:51:30] 2026-03-05 02:51:30,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 03:51:30] 2026-03-05 02:51:30,234 | INFO     | traces error code: 0
[2026-03-05 03:51:30] 2026-03-05 02:51:30,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 03:51:30] 2026-03-05 02:51:30,274 [wrapper] ==== pilot stdout END ====
[2026-03-05 03:51:30] 2026-03-05 02:51:30,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 03:51:30] 2026-03-05 02:51:30,275 [wrapper] pilotpid: 100444
[2026-03-05 03:51:30] 2026-03-05 02:51:30,276 [wrapper] Pilot exit status: 0
[2026-03-05 03:51:30] 2026-03-05 02:51:30,279 [wrapper] pandaids: 7030311798
[2026-03-05 03:51:30] 2026-03-05 02:51:30,287 [wrapper] cleanup supervisor_pilot  148986 100445
[2026-03-05 03:51:30] 2026-03-05 02:51:30,288 [wrapper] Test setup, not cleaning
[2026-03-05 03:51:30] 2026-03-05 02:51:30,288 [wrapper] apfmon messages muted
[2026-03-05 03:51:30] 2026-03-05 02:51:30,289 [wrapper] ==== wrapper stdout END ====
[2026-03-05 03:51:30] 2026-03-05 02:51:30,290 [wrapper] ==== wrapper stderr END ====
[2026-03-05 03:51:30]  *** Error codes and diagnostics ***
[2026-03-05 03:51:30]     "exeErrorCode": 0,
[2026-03-05 03:51:30]     "exeErrorDiag": "",
[2026-03-05 03:51:30]     "pilotErrorCode": 0,
[2026-03-05 03:51:30]     "pilotErrorDiag": "",
[2026-03-05 03:51:30]  *** Listing of results directory ***
[2026-03-05 03:51:30] total 508160
[2026-03-05 03:51:30] -rwx------ 1 casi34 casi34     36322 25 f&#195;&#169;vr. 17:54 runpilot2-wrapper.sh
[2026-03-05 03:51:30] -rw-r--r-- 1 casi34 casi34    584627 25 f&#195;&#169;vr. 17:55 pilot3.tar.gz
[2026-03-05 03:51:30] -rw-r--r-- 1 casi34 casi34      5111 25 f&#195;&#169;vr. 17:58 queuedata.json
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34       100  5 mars  02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 03:51:30] -rwxr-xr-x 1 casi34 casi34      7986  5 mars  02:35 run_atlas
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34       105  5 mars  02:35 job.xml
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34     15845  5 mars  02:35 start_atlas.sh
[2026-03-05 03:51:30] drwxrwx--x 2 casi34 casi34      4096  5 mars  02:35 shared
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34    597949  5 mars  02:35 input.tar.gz
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34      9487  5 mars  02:35 init_data.xml
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34 285555692  5 mars  02:35 EVNT.48220237._000056.pool.root.1
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34         0  5 mars  02:35 boinc_setup_complete
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34         0  5 mars  02:35 boinc_lockfile
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34      2543  5 mars  02:35 pandaJob.out
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34    997757  5 mars  02:35 agis_schedconf.cvmfs.json
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34   1521291  5 mars  02:35 agis_ddmendpoints.agis.ALL.json
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34       422  5 mars  02:35 workernode_map.json
[2026-03-05 03:51:30] drwx------ 5 casi34 casi34      4096  5 mars  02:35 pilot3
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34 228965540  5 mars  03:50 HITS.48838596._001114.pool.root.1
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34        95  5 mars  03:50 pilot_heartbeat.json
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34      1026  5 mars  03:50 memory_monitor_summary.json
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34    264454  5 mars  03:50 log.48838596._001114.job.log.tgz.1
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34      6295  5 mars  03:50 heartbeat.json
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34       529  5 mars  03:50 boinc_task_state.xml
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34      8192  5 mars  03:51 boinc_mmap_file
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34        27  5 mars  03:51 wrapper_checkpoint.txt
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34      4891  5 mars  03:51 pilotlog.txt
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34    684694  5 mars  03:51 log.48838596._001114.job.log.1
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34       620  5 mars  03:51 runtime_log
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34    962560  5 mars  03:51 result.tar.gz
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34       357  5 mars  03:51 output.list
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34      8794  5 mars  03:51 runtime_log.err
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34       645  5 mars  03:51 ewwKDm6KXF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZ20KDmBBw5rm.diag
[2026-03-05 03:51:30] -rw-rw-r-- 1 casi34 casi34     21356  5 mars  03:51 stderr.txt
[2026-03-05 03:51:30] HITS file was successfully produced:
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34 228965540  5 mars  03:50 shared/HITS.pool.root.1
[2026-03-05 03:51:30]  *** Contents of shared directory: ***
[2026-03-05 03:51:30] total 504012
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34     15845  5 mars  02:35 start_atlas.sh
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34    597949  5 mars  02:35 input.tar.gz
[2026-03-05 03:51:30] -rw-r--r-- 2 casi34 casi34 285555692  5 mars  02:35 ATLAS.root_0
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34 228965540  5 mars  03:50 HITS.pool.root.1
[2026-03-05 03:51:30] -rw------- 1 casi34 casi34    962560  5 mars  03:51 result.tar.gz
03:51:31 (96662): run_atlas exited; CPU time 16899.170962
03:51:31 (96662): called boinc_finish(0)

</stderr_txt>
]]>

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