Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:46 (1843154): wrapper (7.7.26015): starting
02:12:46 (1843154): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 02:12:46] Arguments: --nthreads 4
[2026-03-05 02:12:46] Threads: 4
[2026-03-05 02:12:46] Checking for CVMFS
[2026-03-05 02:12:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 02:12:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 02:12:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 02:12:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 02:12:47] 2.13.3.0 356560 9748 89888 156897 2 50 3903839 4097024 0 130560 0 3397696 99.980 352952 30662 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-03-05 02:12:47] CVMFS is ok
[2026-03-05 02:12:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 02:12:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 02:12:47] Further information can be found at the LHC@home message board.
[2026-03-05 02:12:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 02:12:47] Checking for apptainer binary...
[2026-03-05 02:12:47] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2026-03-05 02:12:47] apptainer is not installed, using version from CVMFS
[2026-03-05 02:12:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 02:12:47] pckeatlas05
[2026-03-05 02:12:47] apptainer works
[2026-03-05 02:12:47] Set ATHENA_PROC_NUMBER=4
[2026-03-05 02:12:47] Set ATHENA_CORE_NUMBER=4
[2026-03-05 02:12:47] Starting ATLAS job with PandaID=7036889114
[2026-03-05 02:12:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 04:42:14]  *** The last 200 lines of the pilot log: ***
[2026-03-05 04:42:14] 2026-03-05 03:41:28,186 | INFO     | time since job start (8913s) is within the limit (349056.0s)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,584 | INFO     | job 7036889114 has state=finished
[2026-03-05 04:42:14] 2026-03-05 03:41:28,584 | INFO     | preparing for final server update for job 7036889114 in state='finished'
[2026-03-05 04:42:14] 2026-03-05 03:41:28,585 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-7036889114/jobReport.json
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | this job has now completed (state=finished)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | log transfer has been attempted: DONE
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | job 7036889114 has finished - writing final server update
[2026-03-05 04:42:14] 2026-03-05 03:41:28,586 | INFO     | total number of processed events: 400 (read)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,587 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-7036889114/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,587 | INFO     | extracted standard info from prmon json
[2026-03-05 04:42:14] 2026-03-05 03:41:28,587 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 04:42:14] 2026-03-05 03:41:28,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 04:42:14] 2026-03-05 03:41:28,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 04:42:14] 2026-03-05 03:41:28,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 04:42:14] 2026-03-05 03:41:28,589 | INFO     | fitting pss+swap vs Time
[2026-03-05 04:42:14] 2026-03-05 03:41:28,589 | INFO     | sum of square deviations: 964976232.5
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | sum of deviations: 689226190.0000017
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | mean x: 1772677614.5
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | mean y: 2423770.835616438
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | intersect: -1263696364.7607043
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | chi2: 1.085024036462131
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | sum of square deviations: 869188390.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,590 | INFO     | sum of deviations: 1113654307.9999998
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | mean x: 1772677462.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | mean y: 2424446.8156028367
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | intersect: -2268832181.7396936
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | chi2: 1.0859361616040906
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | current chi2=1.0859361616040906 (change=-0.08406497103359978 %)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | right removable region: 140
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | sum of square deviations: 869188390.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,591 | INFO     | sum of deviations: -11977738814.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | mean x: 1772677767.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | mean y: 2443477.063829787
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | intersect: 24430601444.64868
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | chi2: 0.016574453719496784
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | current chi2=0.016574453719496784 (change=98.47243441965212 %)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | sum of square deviations: 779958810.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | sum of deviations: -11877550035.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,592 | INFO     | mean x: 1772677919.5
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | mean y: 2443297.4852941176
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | intersect: 26997549211.86166
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | chi2: 0.013894041372715061
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | current chi2=0.013894041372715061 (change=16.171949870231398 %)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | left removable region: 20
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | sum of square deviations: 535786790.0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | sum of deviations: -9349793330.5
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | mean x: 1772678041.5
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | mean y: 2441756.3916666666
[2026-03-05 04:42:14] 2026-03-05 03:41:28,593 | INFO     | intersect: 30936711952.826527
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | chi2: 0.012346615579969812
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | current memory leak: -17.45 B/s (using 120 data points, chi2=0.01)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | could have reported an average CPU frequency of 3778 MHz (8 samples)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | ..............................
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . Timing measurements:
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . get job = 0 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . initial setup = 2 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . payload setup = 4 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . stage-in = 0 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . payload execution = 8894 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . stage-out = 0 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | . log creation = 0 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,594 | INFO     | ..............................
[2026-03-05 04:42:14] 2026-03-05 03:41:28,640 | INFO     | 
[2026-03-05 04:42:14] 2026-03-05 03:41:28,640 | INFO     | job summary report
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | --------------------------------------------------
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | PanDA job id: 7036889114
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | task id: 48838586
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | errors: (none)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | pilot state: finished 
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | transexitcode: 0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | exeerrorcode: 0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | exeerrordiag: 
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | exitcode: 0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | exitmsg: OK
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | cpuconsumptiontime: 34283 s
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | nevents: 400
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | neventsw: 0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | pid: 1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | pgrp: 1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | corecount: 4
[2026-03-05 04:42:14] 2026-03-05 03:41:28,641 | INFO     | event service: False
[2026-03-05 04:42:14] 2026-03-05 03:41:28,642 | INFO     | sizes: {0: 2295760, 11: 2295760, 8898: 2324091, 8899: 2324090, 8900: 2333144, 8901: 2333200, 8903: 2333522}
[2026-03-05 04:42:14] 2026-03-05 03:41:28,642 | INFO     | --------------------------------------------------
[2026-03-05 04:42:14] 2026-03-05 03:41:28,642 | INFO     | 
[2026-03-05 04:42:14] 2026-03-05 03:41:28,642 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | job 7036889114 has completed (purged errors)
[2026-03-05 04:42:14] 2026-03-05 03:41:28,651 | INFO     | overall cleanup function is called
[2026-03-05 04:42:14] 2026-03-05 03:41:29,238 | INFO     | PID=1847152 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 04:42:14] 2026-03-05 03:41:29,657 | INFO     | --- collectZombieJob: --- 10, [1852281]
[2026-03-05 04:42:14] 2026-03-05 03:41:29,657 | INFO     | zombie collector waiting for pid 1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:29,657 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 04:42:14] 2026-03-05 03:41:29,658 | INFO     | collected zombie processes
[2026-03-05 04:42:14] 2026-03-05 03:41:29,658 | INFO     | will attempt to kill all subprocesses of pid=1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:29,696 | INFO     | process IDs to be killed: [1852281] (in reverse order)
[2026-03-05 04:42:14] 2026-03-05 03:41:29,713 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 04:42:14] 2026-03-05 03:41:29,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 04:42:14] 2026-03-05 03:41:29,715 | INFO     | did not find any defunct processes belonging to 1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:29,716 | INFO     | did not find any defunct processes belonging to 1852281
[2026-03-05 04:42:14] 2026-03-05 03:41:29,716 | INFO     | ready for new job
[2026-03-05 04:42:14] 2026-03-05 03:41:29,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 04:42:14] 2026-03-05 03:41:29,717 | INFO     | **************************************
[2026-03-05 04:42:14] 2026-03-05 03:41:29,717 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 04:42:14] 2026-03-05 03:41:29,717 | INFO     | **************************************
[2026-03-05 04:42:14] 2026-03-05 03:41:29,717 | INFO     | 
[2026-03-05 04:42:14] 2026-03-05 03:41:29,718 | INFO     | architecture information:
[2026-03-05 04:42:14] 2026-03-05 03:41:29,718 | INFO     | executing command: cat /etc/os-release
[2026-03-05 04:42:14] 2026-03-05 03:41:29,724 | INFO     | cat /etc/os-release:
[2026-03-05 04:42:14] NAME="CentOS Linux"
[2026-03-05 04:42:14] VERSION="7 (Core)"
[2026-03-05 04:42:14] ID="centos"
[2026-03-05 04:42:14] ID_LIKE="rhel fedora"
[2026-03-05 04:42:14] VERSION_ID="7"
[2026-03-05 04:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 04:42:14] ANSI_COLOR="0;31"
[2026-03-05 04:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 04:42:14] HOME_URL="https://www.centos.org/"
[2026-03-05 04:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 04:42:14] 
[2026-03-05 04:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 04:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 04:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 04:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 04:42:14] 
[2026-03-05 04:42:14] 2026-03-05 03:41:29,724 | INFO     | **************************************
[2026-03-05 04:42:14] 2026-03-05 03:41:30,227 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | INFO     | sufficient remaining disk space (41253076992 B)
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | INFO     | update_server=False
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 04:42:14] 2026-03-05 03:41:30,234 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-05 04:42:14] 2026-03-05 03:41:30,235 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 04:42:14] 2026-03-05 03:41:30,235 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 04:42:14] 2026-03-05 03:41:30,235 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 04:42:14] 2026-03-05 03:41:30,379 | INFO     | all data control threads have been joined
[2026-03-05 04:42:14] 2026-03-05 03:41:30,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:42:14] 2026-03-05 03:41:30,881 | INFO     | aborting loop
[2026-03-05 04:42:14] 2026-03-05 03:41:31,239 | INFO     | [job] retrieve thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,239 | INFO     | [job] queue monitor thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,259 | INFO     | [data] copytool_in thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,371 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,384 | INFO     | [data] control thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,460 | INFO     | all payload control threads have been joined
[2026-03-05 04:42:14] 2026-03-05 03:41:31,544 | INFO     | all job control threads have been joined
[2026-03-05 04:42:14] 2026-03-05 03:41:31,636 | INFO     | [payload] failed_post thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:31,886 | INFO     | [job] job monitor thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,161 | INFO     | [payload] validate_post thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,240 | INFO     | [data] copytool_out thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,418 | INFO     | [job] validate thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,465 | INFO     | [payload] control thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,536 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,549 | INFO     | [job] control thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,605 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:32,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 04:42:14] 2026-03-05 03:41:34,278 | INFO     | job.realtimelogging is not enabled
[2026-03-05 04:42:14] 2026-03-05 03:41:35,283 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:41:36,789 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 04:42:14] 2026-03-05 03:42:09,194 | INFO     | [monitor] cgroup control has ended
[2026-03-05 04:42:14] 2026-03-05 03:42:09,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073790961472)>', '<ExcThread(monitor, started 140073362249472)>']
[2026-03-05 04:42:14] 2026-03-05 03:42:10,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 04:42:14] 2026-03-05 03:42:10,419 | INFO     | [monitor] control thread has ended
[2026-03-05 04:42:14] 2026-03-05 03:42:14,525 | INFO     | all workflow threads have been joined
[2026-03-05 04:42:14] 2026-03-05 03:42:14,526 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 04:42:14] 2026-03-05 03:42:14,526 | INFO     | traces error code: 0
[2026-03-05 04:42:14] 2026-03-05 03:42:14,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 04:42:14] 2026-03-05 03:42:14,582 [wrapper] ==== pilot stdout END ====
[2026-03-05 04:42:14] 2026-03-05 03:42:14,583 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 04:42:14] 2026-03-05 03:42:14,584 [wrapper] pilotpid: 1847152
[2026-03-05 04:42:14] 2026-03-05 03:42:14,585 [wrapper] Pilot exit status: 0
[2026-03-05 04:42:14] 2026-03-05 03:42:14,589 [wrapper] pandaids: 7036889114
[2026-03-05 04:42:14] 2026-03-05 03:42:14,600 [wrapper] cleanup supervisor_pilot 1864889 1847153
[2026-03-05 04:42:14] 2026-03-05 03:42:14,601 [wrapper] Test setup, not cleaning
[2026-03-05 04:42:14] 2026-03-05 03:42:14,602 [wrapper] apfmon messages muted
[2026-03-05 04:42:14] 2026-03-05 03:42:14,603 [wrapper] ==== wrapper stdout END ====
[2026-03-05 04:42:14] 2026-03-05 03:42:14,604 [wrapper] ==== wrapper stderr END ====
[2026-03-05 04:42:14]  *** Error codes and diagnostics ***
[2026-03-05 04:42:14]     "exeErrorCode": 0,
[2026-03-05 04:42:14]     "exeErrorDiag": "",
[2026-03-05 04:42:14]     "pilotErrorCode": 0,
[2026-03-05 04:42:14]     "pilotErrorDiag": "",
[2026-03-05 04:42:14]  *** Listing of results directory ***
[2026-03-05 04:42:14] total 482972
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc    584627 Mar  4 01:25 pilot3.tar.gz
[2026-03-05 04:42:14] -rwx------ 1 boinc boinc     36322 Mar  4 01:31 runpilot2-wrapper.sh
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc      5111 Mar  4 01:32 queuedata.json
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc       100 Mar  5 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 04:42:14] -rwxr-xr-x 1 boinc boinc      7986 Mar  5 02:12 run_atlas
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc       105 Mar  5 02:12 job.xml
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc      6313 Mar  5 02:12 init_data.xml
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc 276613631 Mar  5 02:12 EVNT.48220221._000159.pool.root.1
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc     15845 Mar  5 02:12 start_atlas.sh
[2026-03-05 04:42:14] drwxrwx--x 2 boinc boinc        68 Mar  5 02:12 shared
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc    597959 Mar  5 02:12 input.tar.gz
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc         0 Mar  5 02:12 boinc_lockfile
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc      2562 Mar  5 02:12 pandaJob.out
[2026-03-05 04:42:14] -rw------- 1 boinc boinc    997749 Mar  5 02:12 agis_schedconf.cvmfs.json
[2026-03-05 04:42:14] -rw------- 1 boinc boinc   1521291 Mar  5 02:12 agis_ddmendpoints.agis.ALL.json
[2026-03-05 04:42:14] -rw------- 1 boinc boinc       421 Mar  5 02:12 workernode_map.json
[2026-03-05 04:42:14] drwx------ 5 boinc boinc      4096 Mar  5 02:12 pilot3
[2026-03-05 04:42:14] -rw------- 1 boinc boinc        95 Mar  5 04:40 pilot_heartbeat.json
[2026-03-05 04:42:14] -rw------- 1 boinc boinc 210867538 Mar  5 04:41 HITS.48838586._003926.pool.root.1
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc       529 Mar  5 04:41 boinc_task_state.xml
[2026-03-05 04:42:14] -rw------- 1 boinc boinc      1028 Mar  5 04:41 memory_monitor_summary.json
[2026-03-05 04:42:14] -rw------- 1 boinc boinc    311578 Mar  5 04:41 log.48838586._003926.job.log.tgz.1
[2026-03-05 04:42:14] -rw------- 1 boinc boinc      6302 Mar  5 04:41 heartbeat.json
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc        27 Mar  5 04:42 wrapper_checkpoint.txt
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc      8192 Mar  5 04:42 boinc_mmap_file
[2026-03-05 04:42:14] -rw------- 1 boinc boinc      4620 Mar  5 04:42 pilotlog.txt
[2026-03-05 04:42:14] -rw------- 1 boinc boinc   1268461 Mar  5 04:42 log.48838586._003926.job.log.1
[2026-03-05 04:42:14] -rw------- 1 boinc boinc       357 Mar  5 04:42 output.list
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc       620 Mar  5 04:42 runtime_log
[2026-03-05 04:42:14] -rw------- 1 boinc boinc   1597440 Mar  5 04:42 result.tar.gz
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc      8829 Mar  5 04:42 runtime_log.err
[2026-03-05 04:42:14] -rw------- 1 boinc boinc       650 Mar  5 04:42 GgxMDmxJpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3VILDmi2mRVo.diag
[2026-03-05 04:42:14] -rw-r--r-- 1 boinc boinc     21372 Mar  5 04:42 stderr.txt
[2026-03-05 04:42:14] HITS file was successfully produced:
[2026-03-05 04:42:14] -rw------- 1 boinc boinc 210867538 Mar  5 04:41 shared/HITS.pool.root.1
[2026-03-05 04:42:14]  *** Contents of shared directory: ***
[2026-03-05 04:42:14] total 478220
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc 276613631 Mar  5 02:12 ATLAS.root_0
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc     15845 Mar  5 02:12 start_atlas.sh
[2026-03-05 04:42:14] -rw-r--r-- 2 boinc boinc    597959 Mar  5 02:12 input.tar.gz
[2026-03-05 04:42:14] -rw------- 1 boinc boinc 210867538 Mar  5 04:41 HITS.pool.root.1
[2026-03-05 04:42:14] -rw------- 1 boinc boinc   1597440 Mar  5 04:42 result.tar.gz
04:42:15 (1843154): run_atlas exited; CPU time 34341.577755
04:42:15 (1843154): called boinc_finish(0)

</stderr_txt>
]]>

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