Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:51:20 (3401235): wrapper (7.7.26015): starting
12:51:20 (3401235): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 12:51:20] Arguments: --nthreads 4
[2026-03-05 12:51:20] Threads: 4
[2026-03-05 12:51:20] Checking for CVMFS
[2026-03-05 12:51:20] No cvmfs_config command found, will try listing directly
[2026-03-05 12:51:20] CVMFS is ok
[2026-03-05 12:51:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 12:51:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 12:51:20] Further information can be found at the LHC@home message board.
[2026-03-05 12:51:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 12:51:20] Checking for apptainer binary...
[2026-03-05 12:51:20] which: no apptainer in ((null))
[2026-03-05 12:51:20] apptainer is not installed, using version from CVMFS
[2026-03-05 12:51:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 12:51:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-03-05 12:51:20] apptainer works
[2026-03-05 12:51:21] Set ATHENA_PROC_NUMBER=4
[2026-03-05 12:51:21] Set ATHENA_CORE_NUMBER=4
[2026-03-05 12:51:21] Starting ATLAS job with PandaID=7040464839
[2026-03-05 12:51:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 16:16:30]  *** The last 200 lines of the pilot log: ***
[2026-03-05 16:16:30] 2026-03-05 15:11:09,476 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7040464839/jobReport.json
[2026-03-05 16:16:30] 2026-03-05 15:11:09,480 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/0/workernode_map.json
[2026-03-05 16:16:30] 2026-03-05 15:11:09,480 | INFO     | this job has now completed (state=finished)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,480 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,480 | INFO     | log transfer has been attempted: DONE
[2026-03-05 16:16:30] 2026-03-05 15:11:09,480 | INFO     | job 7040464839 has finished - writing final server update
[2026-03-05 16:16:30] 2026-03-05 15:11:09,481 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_14486/.job.ad'
[2026-03-05 16:16:30] 2026-03-05 15:11:09,483 | INFO     | total number of processed events: 400 (read)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,509 | INFO     | using path: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7040464839/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,510 | INFO     | extracted standard info from prmon json
[2026-03-05 16:16:30] 2026-03-05 15:11:09,510 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 16:16:30] 2026-03-05 15:11:09,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 16:16:30] 2026-03-05 15:11:09,510 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 16:16:30] 2026-03-05 15:11:09,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 16:16:30] 2026-03-05 15:11:09,515 | INFO     | fitting pss+swap vs Time
[2026-03-05 16:16:30] 2026-03-05 15:11:09,515 | INFO     | sum of square deviations: 2334722845.0
[2026-03-05 16:16:30] 2026-03-05 15:11:09,516 | INFO     | sum of deviations: 26272469389.500004
[2026-03-05 16:16:30] 2026-03-05 15:11:09,516 | INFO     | mean x: 1772717480.5
[2026-03-05 16:16:30] 2026-03-05 15:11:09,517 | INFO     | mean y: 2324026.6275510206
[2026-03-05 16:16:30] 2026-03-05 15:11:09,517 | INFO     | intersect: -19945939144.05634
[2026-03-05 16:16:30] 2026-03-05 15:11:09,517 | INFO     | chi2: 1.3968338409080296
[2026-03-05 16:16:30] 2026-03-05 15:11:09,517 | INFO     | sum of square deviations: 2160561440.0
[2026-03-05 16:16:30] 2026-03-05 15:11:09,518 | INFO     | sum of deviations: 25343707149.000004
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | mean x: 1772717328.0
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | mean y: 2323217.1413612566
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | intersect: -20791914792.951878
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | chi2: 1.3975293708298042
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | current chi2=1.3975293708298042 (change=-0.0497933183894253 %)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,519 | INFO     | right removable region: 190
[2026-03-05 16:16:30] 2026-03-05 15:11:09,520 | INFO     | sum of square deviations: 2160561440.0
[2026-03-05 16:16:30] 2026-03-05 15:11:09,521 | INFO     | sum of deviations: -691439696.9999999
[2026-03-05 16:16:30] 2026-03-05 15:11:09,521 | INFO     | mean x: 1772717633.0
[2026-03-05 16:16:30] 2026-03-05 15:11:09,521 | INFO     | mean y: 2347354.0890052356
[2026-03-05 16:16:30] 2026-03-05 15:11:09,521 | INFO     | intersect: 569666255.7112044
[2026-03-05 16:16:30] 2026-03-05 15:11:09,521 | INFO     | chi2: 0.0025815098578041997
[2026-03-05 16:16:30] 2026-03-05 15:11:09,522 | INFO     | current chi2=0.0025815098578041997 (change=99.81518847967443 %)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,522 | INFO     | sum of square deviations: 1995283922.5
[2026-03-05 16:16:30] 2026-03-05 15:11:09,523 | INFO     | sum of deviations: -1026885193.4999996
[2026-03-05 16:16:30] 2026-03-05 15:11:09,523 | INFO     | mean x: 1772717785.5
[2026-03-05 16:16:30] 2026-03-05 15:11:09,523 | INFO     | mean y: 2347659.801075269
[2026-03-05 16:16:30] 2026-03-05 15:11:09,523 | INFO     | intersect: 914687816.3353933
[2026-03-05 16:16:30] 2026-03-05 15:11:09,524 | INFO     | chi2: 0.002277354554664463
[2026-03-05 16:16:30] 2026-03-05 15:11:09,524 | INFO     | current chi2=0.002277354554664463 (change=11.782070179598211 %)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,524 | INFO     | left removable region: 20
[2026-03-05 16:16:30] 2026-03-05 15:11:09,524 | INFO     | sum of square deviations: 1523386702.5
[2026-03-05 16:16:30] 2026-03-05 15:11:09,525 | INFO     | sum of deviations: -1101798713.9999998
[2026-03-05 16:16:30] 2026-03-05 15:11:09,525 | INFO     | mean x: 1772717907.5
[2026-03-05 16:16:30] 2026-03-05 15:11:09,525 | INFO     | mean y: 2347297.776470588
[2026-03-05 16:16:30] 2026-03-05 15:11:09,526 | INFO     | intersect: 1284476324.8731022
[2026-03-05 16:16:30] 2026-03-05 15:11:09,526 | INFO     | chi2: 0.0018921329903451671
[2026-03-05 16:16:30] 2026-03-05 15:11:09,526 | INFO     | current memory leak: -0.72 B/s (using 170 data points, chi2=0.00)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,526 | INFO     | could have reported an average CPU frequency of 2705 MHz (10 samples)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,526 | INFO     | ..............................
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . Timing measurements:
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . get job = 0 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . initial setup = 8 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . payload setup = 10 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . stage-in = 0 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . payload execution = 11935 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . stage-out = 1 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | . log creation = 0 s
[2026-03-05 16:16:30] 2026-03-05 15:11:09,527 | INFO     | ..............................
[2026-03-05 16:16:30] 2026-03-05 15:11:09,914 | INFO     | time since job start (11966s) is within the limit (349056.0s)
[2026-03-05 16:16:30] 2026-03-05 15:11:09,915 | INFO     | 11975s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-05 16:16:30] 2026-03-05 15:11:10,070 | INFO     | 
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | job summary report
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | --------------------------------------------------
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | PanDA job id: 7040464839
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | task id: 48958627
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | errors: (none)
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | pilot state: finished 
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | transexitcode: 0
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | exeerrorcode: 0
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | exeerrordiag: 
[2026-03-05 16:16:30] 2026-03-05 15:11:10,071 | INFO     | exitcode: 0
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | exitmsg: OK
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | cpuconsumptiontime: 45458 s
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | nevents: 400
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | neventsw: 0
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | pid: 3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | pgrp: 3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | corecount: 4
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | event service: False
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | sizes: {0: 2295323, 1: 2295784, 11: 2295784, 11949: 2325804, 11950: 2334824, 11953: 2334880, 11955: 2335202}
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | --------------------------------------------------
[2026-03-05 16:16:30] 2026-03-05 15:11:10,072 | INFO     | 
[2026-03-05 16:16:30] 2026-03-05 15:11:10,073 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,104 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 16:16:30] 2026-03-05 15:11:10,105 | INFO     | job 7040464839 has completed (purged errors)
[2026-03-05 16:16:30] 2026-03-05 15:11:10,106 | INFO     | overall cleanup function is called
[2026-03-05 16:16:30] 2026-03-05 15:11:11,114 | INFO     | --- collectZombieJob: --- 10, [3410864]
[2026-03-05 16:16:30] 2026-03-05 15:11:11,114 | INFO     | zombie collector waiting for pid 3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:11,114 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 16:16:30] 2026-03-05 15:11:11,115 | INFO     | collected zombie processes
[2026-03-05 16:16:30] 2026-03-05 15:11:11,115 | INFO     | will attempt to kill all subprocesses of pid=3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:12,008 | INFO     | process IDs to be killed: [3410864] (in reverse order)
[2026-03-05 16:16:30] 2026-03-05 15:11:12,351 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 16:16:30] 2026-03-05 15:11:12,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 16:16:30] 2026-03-05 15:11:12,384 | INFO     | did not find any defunct processes belonging to 3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:12,414 | INFO     | did not find any defunct processes belonging to 3410864
[2026-03-05 16:16:30] 2026-03-05 15:11:12,414 | INFO     | ready for new job
[2026-03-05 16:16:30] 2026-03-05 15:11:12,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 16:16:30] 2026-03-05 15:11:12,417 | INFO     | **************************************
[2026-03-05 16:16:30] 2026-03-05 15:11:12,417 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 16:16:30] 2026-03-05 15:11:12,417 | INFO     | **************************************
[2026-03-05 16:16:30] 2026-03-05 15:11:12,417 | INFO     | 
[2026-03-05 16:16:30] 2026-03-05 15:11:12,425 | INFO     | architecture information:
[2026-03-05 16:16:30] 2026-03-05 15:11:12,426 | INFO     | executing command: cat /etc/os-release
[2026-03-05 16:16:30] 2026-03-05 15:11:12,455 | INFO     | cat /etc/os-release:
[2026-03-05 16:16:30] NAME="CentOS Linux"
[2026-03-05 16:16:30] VERSION="7 (Core)"
[2026-03-05 16:16:30] ID="centos"
[2026-03-05 16:16:30] ID_LIKE="rhel fedora"
[2026-03-05 16:16:30] VERSION_ID="7"
[2026-03-05 16:16:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 16:16:30] ANSI_COLOR="0;31"
[2026-03-05 16:16:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 16:16:30] HOME_URL="https://www.centos.org/"
[2026-03-05 16:16:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 16:16:30] 
[2026-03-05 16:16:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 16:16:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 16:16:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 16:16:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 16:16:30] 
[2026-03-05 16:16:30] 2026-03-05 15:11:12,455 | INFO     | **************************************
[2026-03-05 16:16:30] 2026-03-05 15:11:12,958 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-03-05 16:16:30] 2026-03-05 15:11:12,991 | INFO     | sufficient remaining disk space (261018877952 B)
[2026-03-05 16:16:30] 2026-03-05 15:11:12,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 16:16:30] 2026-03-05 15:11:12,991 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 16:16:30] 2026-03-05 15:11:12,992 | INFO     | update_server=False
[2026-03-05 16:16:30] 2026-03-05 15:11:12,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 16:16:30] 2026-03-05 15:11:12,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:16:30] 2026-03-05 15:11:12,992 | INFO     | aborting loop
[2026-03-05 16:16:30] 2026-03-05 15:11:13,161 | INFO     | all payload control threads have been joined
[2026-03-05 16:16:30] 2026-03-05 15:11:13,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 16:16:30] 2026-03-05 15:11:13,461 | INFO     | all data control threads have been joined
[2026-03-05 16:16:30] 2026-03-05 15:11:13,996 | INFO     | [job] retrieve thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,000 | INFO     | [job] job monitor thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,064 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 16:16:30] 2026-03-05 15:11:14,097 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,166 | INFO     | [payload] control thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,266 | INFO     | [job] validate thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,282 | INFO     | all job control threads have been joined
[2026-03-05 16:16:30] 2026-03-05 15:11:14,466 | INFO     | [data] control thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,580 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:14,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:16:30] 2026-03-05 15:11:14,820 | INFO     | [payload] validate_post thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:15,134 | INFO     | [data] copytool_in thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:15,287 | INFO     | [job] control thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:15,371 | INFO     | [data] copytool_out thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:15,440 | INFO     | [payload] failed_post thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:15,633 | INFO     | [job] queue monitor thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:18,077 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:23,080 | INFO     | job.realtimelogging is not enabled
[2026-03-05 16:16:30] 2026-03-05 15:11:24,085 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 16:16:30] 2026-03-05 15:11:44,048 | INFO     | PID=3405318 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 16:16:30] 2026-03-05 15:11:44,048 | INFO     | .. there are 23 such processes running
[2026-03-05 16:16:30] 2026-03-05 15:11:44,048 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 16:16:30] 2026-03-05 15:11:44,048 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 16:16:30] 2026-03-05 15:11:44,048 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 16:16:30] 2026-03-05 15:12:03,402 | INFO     | [monitor] cgroup control has ended
[2026-03-05 16:16:30] 2026-03-05 15:12:04,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22423947876160)>', '<ExcThread(monitor, started 22423694194432)>']
[2026-03-05 16:16:30] 2026-03-05 15:12:05,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 16:16:30] 2026-03-05 15:12:05,154 | INFO     | [monitor] control thread has ended
[2026-03-05 16:16:30] 2026-03-05 15:12:09,470 | INFO     | all workflow threads have been joined
[2026-03-05 16:16:30] 2026-03-05 15:12:09,470 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 16:16:30] 2026-03-05 15:12:09,470 | INFO     | traces error code: 0
[2026-03-05 16:16:30] 2026-03-05 15:12:09,471 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 16:16:30] 2026-03-05 15:12:09,610 [wrapper] ==== pilot stdout END ====
[2026-03-05 16:16:30] 2026-03-05 15:12:09,613 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 16:16:30] 2026-03-05 15:12:09,615 [wrapper] pilotpid: 3405318
[2026-03-05 16:16:30] 2026-03-05 15:12:09,618 [wrapper] Pilot exit status: 0
[2026-03-05 16:16:30] 2026-03-05 15:12:09,630 [wrapper] pandaids: 7040464839
[2026-03-05 16:16:30] 2026-03-05 15:12:09,839 [wrapper] cleanup supervisor_pilot 3912438 3405319
[2026-03-05 16:16:30] 2026-03-05 15:12:09,844 [wrapper] Test setup, not cleaning
[2026-03-05 16:16:30] 2026-03-05 15:12:09,848 [wrapper] apfmon messages muted
[2026-03-05 16:16:30] 2026-03-05 15:12:09,852 [wrapper] ==== wrapper stdout END ====
[2026-03-05 16:16:30] 2026-03-05 15:12:09,857 [wrapper] ==== wrapper stderr END ====
[2026-03-05 16:16:30]  *** Error codes and diagnostics ***
[2026-03-05 16:16:30]     "exeErrorCode": 0,
[2026-03-05 16:16:30]     "exeErrorDiag": "",
[2026-03-05 16:16:30]     "pilotErrorCode": 0,
[2026-03-05 16:16:30]     "pilotErrorDiag": "",
[2026-03-05 16:16:30]  *** Listing of results directory ***
[2026-03-05 16:16:30] total 478656
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc    584627 Mar  4 19:40 pilot3.tar.gz
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc      5111 Mar  4 20:35 queuedata.json
[2026-03-05 16:16:30] -rwx------. 1 boinc boinc     36322 Mar  4 20:35 runpilot2-wrapper.sh
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc       100 Mar  5 12:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 16:16:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 12:51 run_atlas
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc       105 Mar  5 12:51 job.xml
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc 274976863 Mar  5 12:51 EVNT.48958625._000034.pool.root.1
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc      6616 Mar  5 12:51 init_data.xml
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc     15845 Mar  5 12:51 start_atlas.sh
[2026-03-05 16:16:30] drwxrwx--x. 2 boinc boinc      4096 Mar  5 12:51 shared
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc    597939 Mar  5 12:51 input.tar.gz
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc         0 Mar  5 12:51 boinc_lockfile
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc      2518 Mar  5 12:51 pandaJob.out
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc    998489 Mar  5 12:51 agis_schedconf.cvmfs.json
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc       442 Mar  5 12:51 workernode_map.json
[2026-03-05 16:16:30] drwx------. 5 boinc boinc      4096 Mar  5 12:51 pilot3
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc 207189040 Mar  5 16:10 HITS.48958627._000842.pool.root.1
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc       529 Mar  5 16:10 boinc_task_state.xml
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc        95 Mar  5 16:10 pilot_heartbeat.json
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc      1032 Mar  5 16:11 memory_monitor_summary.json
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc   1521291 Mar  5 16:11 agis_ddmendpoints.agis.ALL.json
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc    371598 Mar  5 16:11 log.48958627._000842.job.log.tgz.1
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc      6354 Mar  5 16:11 heartbeat.json
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc      4903 Mar  5 16:12 pilotlog.txt
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc   1643864 Mar  5 16:12 log.48958627._000842.job.log.1
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc       357 Mar  5 16:12 output.list
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc       620 Mar  5 16:12 runtime_log
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc   2037760 Mar  5 16:12 result.tar.gz
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc      9205 Mar  5 16:12 runtime_log.err
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc       666 Mar  5 16:12 nUmNDmIB7H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlTJLDmlj1cWo.diag
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc        27 Mar  5 16:16 wrapper_checkpoint.txt
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc      8192 Mar  5 16:16 boinc_mmap_file
[2026-03-05 16:16:30] -rw-r--r--. 1 boinc boinc     21164 Mar  5 16:16 stderr.txt
[2026-03-05 16:16:30] HITS file was successfully produced:
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc 207189040 Mar  5 16:10 shared/HITS.pool.root.1
[2026-03-05 16:16:30]  *** Contents of shared directory: ***
[2026-03-05 16:16:30] total 473472
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc 274976863 Mar  5 12:51 ATLAS.root_0
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc     15845 Mar  5 12:51 start_atlas.sh
[2026-03-05 16:16:30] -rw-r--r--. 2 boinc boinc    597939 Mar  5 12:51 input.tar.gz
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc 207189040 Mar  5 16:10 HITS.pool.root.1
[2026-03-05 16:16:30] -rw-------. 1 boinc boinc   2037760 Mar  5 16:12 result.tar.gz
16:16:32 (3401235): run_atlas exited; CPU time 46227.608204
16:16:32 (3401235): called boinc_finish(0)

</stderr_txt>
]]>

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