Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:29 (9521): wrapper (7.7.26015): starting
07:26:29 (9521): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 07:26:29] Arguments: --nthreads 8
[2026-03-05 07:26:29] Threads: 8
[2026-03-05 07:26:29] Checking for CVMFS
[2026-03-05 07:26:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 07:26:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 07:26:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 07:26:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 07:26:33] 2.11.2.0 23641 114252 133360 156906 1 53 15822678 25165825 96 130560 156 36977374 99.829 25167014 925 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-05 07:26:33] CVMFS is ok
[2026-03-05 07:26:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 07:26:33] Checking for apptainer binary...
[2026-03-05 07:26:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 07:26:33] Running /usr/bin/apptainer --version
[2026-03-05 07:26:33] apptainer version 1.3.2-1.el7
[2026-03-05 07:26:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 07:26:48] cg-vwn478.simple-grid.lan
[2026-03-05 07:26:48] apptainer works
[2026-03-05 07:26:48] Set ATHENA_PROC_NUMBER=8
[2026-03-05 07:26:48] Set ATHENA_CORE_NUMBER=8
[2026-03-05 07:26:48] Starting ATLAS job with PandaID=7038519483
[2026-03-05 07:26:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 11:09:37]  *** The last 200 lines of the pilot log: ***
[2026-03-05 11:09:37] 2026-03-05 10:08:34,235 | INFO     | total number of processed events: 400 (read)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,237 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7038519483/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,238 | INFO     | extracted standard info from prmon json
[2026-03-05 11:09:37] 2026-03-05 10:08:34,238 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 11:09:37] 2026-03-05 10:08:34,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 11:09:37] 2026-03-05 10:08:34,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 11:09:37] 2026-03-05 10:08:34,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 11:09:37] 2026-03-05 10:08:34,243 | INFO     | fitting pss+swap vs Time
[2026-03-05 11:09:37] 2026-03-05 10:08:34,244 | INFO     | sum of square deviations: 2750295288.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,245 | INFO     | sum of deviations: 78938537851.00002
[2026-03-05 11:09:37] 2026-03-05 10:08:34,246 | INFO     | mean x: 1772698966.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,246 | INFO     | mean y: 2413232.6280193236
[2026-03-05 11:09:37] 2026-03-05 10:08:34,246 | INFO     | intersect: -50877310496.157135
[2026-03-05 11:09:37] 2026-03-05 10:08:34,246 | INFO     | chi2: 7.687251109893055
[2026-03-05 11:09:37] 2026-03-05 10:08:34,247 | INFO     | sum of square deviations: 2555770710.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,248 | INFO     | sum of deviations: 90751446765.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | mean x: 1772698813.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | mean y: 2422279.5198019804
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | intersect: -62943358163.0213
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | chi2: 6.966214339272092
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | current chi2=6.966214339272092 (change=9.379643780506012 %)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,249 | INFO     | right removable region: 201
[2026-03-05 11:09:37] 2026-03-05 10:08:34,250 | INFO     | sum of square deviations: 2555770710.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,252 | INFO     | sum of deviations: 8879596668.500006
[2026-03-05 11:09:37] 2026-03-05 10:08:34,252 | INFO     | mean x: 1772699118.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,252 | INFO     | mean y: 2468104.707920792
[2026-03-05 11:09:37] 2026-03-05 10:08:34,252 | INFO     | intersect: -6156477657.608145
[2026-03-05 11:09:37] 2026-03-05 10:08:34,252 | INFO     | chi2: 2.8220124334942853
[2026-03-05 11:09:37] 2026-03-05 10:08:34,253 | INFO     | current chi2=2.8220124334942853 (change=63.28970664347733 %)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,253 | INFO     | sum of square deviations: 2370641658.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,255 | INFO     | sum of deviations: -33163945700.999992
[2026-03-05 11:09:37] 2026-03-05 10:08:34,255 | INFO     | mean x: 1772699271.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,255 | INFO     | mean y: 2502566.274111675
[2026-03-05 11:09:37] 2026-03-05 10:08:34,255 | INFO     | intersect: 24801570012.530163
[2026-03-05 11:09:37] 2026-03-05 10:08:34,255 | INFO     | chi2: 0.9796124292517354
[2026-03-05 11:09:37] 2026-03-05 10:08:34,256 | INFO     | current chi2=0.9796124292517354 (change=65.28674297728891 %)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,256 | INFO     | sum of square deviations: 2194675568.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,257 | INFO     | sum of deviations: -31977941427.999992
[2026-03-05 11:09:37] 2026-03-05 10:08:34,258 | INFO     | mean x: 1772699423.5
[2026-03-05 11:09:37] 2026-03-05 10:08:34,258 | INFO     | mean y: 2501471.5729166665
[2026-03-05 11:09:37] 2026-03-05 10:08:34,258 | INFO     | intersect: 25831958526.945923
[2026-03-05 11:09:37] 2026-03-05 10:08:34,258 | INFO     | chi2: 0.9515180276921034
[2026-03-05 11:09:37] 2026-03-05 10:08:34,259 | INFO     | current chi2=0.9515180276921034 (change=2.867909871365312 %)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,259 | INFO     | left removable region: 30
[2026-03-05 11:09:37] 2026-03-05 10:08:34,259 | INFO     | sum of square deviations: 1550429070.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,260 | INFO     | sum of deviations: 2352528195.999998
[2026-03-05 11:09:37] 2026-03-05 10:08:34,260 | INFO     | mean x: 1772699698.0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,261 | INFO     | mean y: 2492298.9298245613
[2026-03-05 11:09:37] 2026-03-05 10:08:34,261 | INFO     | intersect: -2687296033.396582
[2026-03-05 11:09:37] 2026-03-05 10:08:34,261 | INFO     | chi2: 0.00024249810943473312
[2026-03-05 11:09:37] 2026-03-05 10:08:34,261 | INFO     | current memory leak: 1.52 B/s (using 171 data points, chi2=0.00)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | ..............................
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | . Timing measurements:
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | . get job = 0 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | . initial setup = 121 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,262 | INFO     | . payload setup = 162 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,263 | INFO     | . stage-in = 0 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,263 | INFO     | . payload execution = 12755 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,263 | INFO     | . stage-out = 3 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,263 | INFO     | . log creation = 1 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,263 | INFO     | ..............................
[2026-03-05 11:09:37] 2026-03-05 10:08:34,382 | INFO     | 
[2026-03-05 11:09:37] 2026-03-05 10:08:34,382 | INFO     | job summary report
[2026-03-05 11:09:37] 2026-03-05 10:08:34,382 | INFO     | --------------------------------------------------
[2026-03-05 11:09:37] 2026-03-05 10:08:34,382 | INFO     | PanDA job id: 7038519483
[2026-03-05 11:09:37] 2026-03-05 10:08:34,382 | INFO     | task id: 48955010
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | errors: (none)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | pilot state: finished 
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | transexitcode: 0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | exeerrorcode: 0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | exeerrordiag: 
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | exitcode: 0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | exitmsg: OK
[2026-03-05 11:09:37] 2026-03-05 10:08:34,383 | INFO     | cpuconsumptiontime: 47831 s
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | nevents: 400
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | neventsw: 0
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | pid: 17954
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | pgrp: 17954
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | corecount: 8
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | event service: False
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | sizes: {0: 2294658, 1: 2295343, 2: 2295804, 12921: 2325727, 12922: 2325726, 12926: 2335102}
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | --------------------------------------------------
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | 
[2026-03-05 11:09:37] 2026-03-05 10:08:34,384 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-05 11:09:37] 2026-03-05 10:08:34,575 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,575 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 11:09:37] 2026-03-05 10:08:34,577 | INFO     | job 7038519483 has completed (purged errors)
[2026-03-05 11:09:37] 2026-03-05 10:08:34,578 | INFO     | overall cleanup function is called
[2026-03-05 11:09:37] 2026-03-05 10:08:35,586 | INFO     | --- collectZombieJob: --- 10, [17954]
[2026-03-05 11:09:37] 2026-03-05 10:08:35,587 | INFO     | zombie collector waiting for pid 17954
[2026-03-05 11:09:37] 2026-03-05 10:08:35,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 11:09:37] 2026-03-05 10:08:35,587 | INFO     | collected zombie processes
[2026-03-05 11:09:37] 2026-03-05 10:08:35,587 | INFO     | will attempt to kill all subprocesses of pid=17954
[2026-03-05 11:09:37] 2026-03-05 10:08:35,653 | INFO     | process IDs to be killed: [17954] (in reverse order)
[2026-03-05 11:09:37] 2026-03-05 10:08:36,003 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 11:09:37] 2026-03-05 10:08:36,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 11:09:37] 2026-03-05 10:08:36,006 | INFO     | did not find any defunct processes belonging to 17954
[2026-03-05 11:09:37] 2026-03-05 10:08:36,007 | INFO     | did not find any defunct processes belonging to 17954
[2026-03-05 11:09:37] 2026-03-05 10:08:36,008 | INFO     | ready for new job
[2026-03-05 11:09:37] 2026-03-05 10:08:36,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 11:09:37] 2026-03-05 10:08:36,010 | INFO     | **************************************
[2026-03-05 11:09:37] 2026-03-05 10:08:36,010 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 11:09:37] 2026-03-05 10:08:36,010 | INFO     | **************************************
[2026-03-05 11:09:37] 2026-03-05 10:08:36,010 | INFO     | 
[2026-03-05 11:09:37] 2026-03-05 10:08:36,011 | INFO     | pilot is running in a VM
[2026-03-05 11:09:37] 2026-03-05 10:08:36,011 | INFO     | architecture information:
[2026-03-05 11:09:37] 2026-03-05 10:08:36,011 | INFO     | executing command: cat /etc/os-release
[2026-03-05 11:09:37] 2026-03-05 10:08:36,026 | INFO     | cat /etc/os-release:
[2026-03-05 11:09:37] NAME="CentOS Linux"
[2026-03-05 11:09:37] VERSION="7 (Core)"
[2026-03-05 11:09:37] ID="centos"
[2026-03-05 11:09:37] ID_LIKE="rhel fedora"
[2026-03-05 11:09:37] VERSION_ID="7"
[2026-03-05 11:09:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 11:09:37] ANSI_COLOR="0;31"
[2026-03-05 11:09:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 11:09:37] HOME_URL="https://www.centos.org/"
[2026-03-05 11:09:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 11:09:37] 
[2026-03-05 11:09:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 11:09:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 11:09:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 11:09:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 11:09:37] 
[2026-03-05 11:09:37] 2026-03-05 10:08:36,026 | INFO     | **************************************
[2026-03-05 11:09:37] 2026-03-05 10:08:36,530 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-05 11:09:37] 2026-03-05 10:08:36,775 | INFO     | sufficient remaining disk space (495422799872 B)
[2026-03-05 11:09:37] 2026-03-05 10:08:36,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 11:09:37] 2026-03-05 10:08:36,776 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 11:09:37] 2026-03-05 10:08:36,776 | INFO     | update_server=False
[2026-03-05 11:09:37] 2026-03-05 10:08:36,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 11:09:37] 2026-03-05 10:08:36,905 | INFO     | all data control threads have been joined
[2026-03-05 11:09:37] 2026-03-05 10:08:36,991 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 11:09:37] 2026-03-05 10:08:36,992 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 11:09:37] 2026-03-05 10:08:36,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:09:37] 2026-03-05 10:08:36,992 | INFO     | will abort loop
[2026-03-05 11:09:37] 2026-03-05 10:08:37,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 11:09:37] 2026-03-05 10:08:37,412 | INFO     | all payload control threads have been joined
[2026-03-05 11:09:37] 2026-03-05 10:08:37,782 | INFO     | [job] retrieve thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:37,912 | INFO     | [data] control thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:37,965 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:37,998 | INFO     | [job] job monitor thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:38,419 | INFO     | [payload] control thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:38,424 | INFO     | [job] validate thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:38,458 | INFO     | all job control threads have been joined
[2026-03-05 11:09:37] 2026-03-05 10:08:38,492 | INFO     | [data] copytool_in thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:38,767 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,007 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,024 | INFO     | [payload] validate_post thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,115 | INFO     | [payload] failed_post thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,138 | INFO     | [data] copytool_out thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,280 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:39,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:09:37] 2026-03-05 10:08:39,465 | INFO     | [job] control thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:40,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 11:09:37] 2026-03-05 10:08:40,403 | INFO     | [job] queue monitor thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:08:44,250 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 11:09:37] 2026-03-05 10:09:06,079 | INFO     | PID=13509 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 11:09:37] 2026-03-05 10:09:06,079 | INFO     | .. there are 2 such processes running
[2026-03-05 11:09:37] 2026-03-05 10:09:06,080 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 11:09:37] 2026-03-05 10:09:06,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 11:09:37] 2026-03-05 10:09:06,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 11:09:37] 2026-03-05 10:09:27,719 | INFO     | [monitor] cgroup control has ended
[2026-03-05 11:09:37] 2026-03-05 10:09:27,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801596348224)>', '<ExcThread(monitor, started 139801302914816)>']
[2026-03-05 11:09:37] 2026-03-05 10:09:28,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 11:09:37] 2026-03-05 10:09:28,211 | INFO     | [monitor] control thread has ended
[2026-03-05 11:09:37] 2026-03-05 10:09:32,759 | INFO     | all workflow threads have been joined
[2026-03-05 11:09:37] 2026-03-05 10:09:32,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 11:09:37] 2026-03-05 10:09:32,760 | INFO     | traces error code: 0
[2026-03-05 11:09:37] 2026-03-05 10:09:32,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 11:09:37] 2026-03-05 10:09:33,349 [wrapper] ==== pilot stdout END ====
[2026-03-05 11:09:37] 2026-03-05 10:09:33,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 11:09:37] 2026-03-05 10:09:33,526 [wrapper] pilotpid: 13509
[2026-03-05 11:09:37] 2026-03-05 10:09:33,657 [wrapper] Pilot exit status: 0
[2026-03-05 11:09:37] 2026-03-05 10:09:34,148 [wrapper] pandaids: 7038519483
[2026-03-05 11:09:37] 2026-03-05 10:09:34,794 [wrapper] cleanup supervisor_pilot 23735 13510
[2026-03-05 11:09:37] 2026-03-05 10:09:34,848 [wrapper] Test setup, not cleaning
[2026-03-05 11:09:37] 2026-03-05 10:09:34,959 [wrapper] apfmon messages muted
[2026-03-05 11:09:37] 2026-03-05 10:09:35,079 [wrapper] ==== wrapper stdout END ====
[2026-03-05 11:09:37] 2026-03-05 10:09:35,191 [wrapper] ==== wrapper stderr END ====
[2026-03-05 11:09:37]  *** Error codes and diagnostics ***
[2026-03-05 11:09:37]     "exeErrorCode": 0,
[2026-03-05 11:09:37]     "exeErrorDiag": "",
[2026-03-05 11:09:37]     "pilotErrorCode": 0,
[2026-03-05 11:09:37]     "pilotErrorDiag": "",
[2026-03-05 11:09:37]  *** Listing of results directory ***
[2026-03-05 11:09:37] total 616172
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc    584627 Mar  4 19:35 pilot3.tar.gz
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc      5111 Mar  4 19:38 queuedata.json
[2026-03-05 11:09:37] -rwx------. 1 boinc boinc     36322 Mar  4 19:38 runpilot2-wrapper.sh
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc       100 Mar  5 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 11:09:37] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 07:26 run_atlas
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc       105 Mar  5 07:26 job.xml
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc      6391 Mar  5 07:26 init_data.xml
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc 439181942 Mar  5 07:26 EVNT.46701403._001054.pool.root.1
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc     15845 Mar  5 07:26 start_atlas.sh
[2026-03-05 11:09:37] drwxrwx--x. 2 boinc boinc        68 Mar  5 07:26 shared
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc    597951 Mar  5 07:26 input.tar.gz
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc         0 Mar  5 07:26 boinc_lockfile
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc      2560 Mar  5 07:26 pandaJob.out
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc       415 Mar  5 07:32 workernode_map.json
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc    997749 Mar  5 07:33 agis_schedconf.cvmfs.json
[2026-03-05 11:09:37] drwx------. 5 boinc boinc      4096 Mar  5 07:33 pilot3
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc 183345904 Mar  5 11:07 HITS.48955010._002655.pool.root.1
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc       531 Mar  5 11:07 boinc_task_state.xml
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc        95 Mar  5 11:08 pilot_heartbeat.json
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc      1010 Mar  5 11:08 memory_monitor_summary.json
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc   1521291 Mar  5 11:08 agis_ddmendpoints.agis.ALL.json
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc    433367 Mar  5 11:08 log.48955010._002655.job.log.tgz.1
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc      6313 Mar  5 11:08 heartbeat.json
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc      8192 Mar  5 11:09 boinc_mmap_file
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc        28 Mar  5 11:09 wrapper_checkpoint.txt
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc      5066 Mar  5 11:09 pilotlog.txt
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc   1822070 Mar  5 11:09 log.48955010._002655.job.log.1
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc       357 Mar  5 11:09 output.list
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc       620 Mar  5 11:09 runtime_log
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc   2273280 Mar  5 11:09 result.tar.gz
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc       655 Mar  5 11:09 w7rLDm6H6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmBPJLDmAENabn.diag
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc      8816 Mar  5 11:09 runtime_log.err
[2026-03-05 11:09:37] -rw-r--r--. 1 boinc boinc     20699 Mar  5 11:09 stderr.txt
[2026-03-05 11:09:37] HITS file was successfully produced:
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc 183345904 Mar  5 11:07 shared/HITS.pool.root.1
[2026-03-05 11:09:37]  *** Contents of shared directory: ***
[2026-03-05 11:09:37] total 610764
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc 439181942 Mar  5 07:26 ATLAS.root_0
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc     15845 Mar  5 07:26 start_atlas.sh
[2026-03-05 11:09:37] -rw-r--r--. 2 boinc boinc    597951 Mar  5 07:26 input.tar.gz
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc 183345904 Mar  5 11:07 HITS.pool.root.1
[2026-03-05 11:09:37] -rw-------. 1 boinc boinc   2273280 Mar  5 11:09 result.tar.gz
11:09:38 (9521): run_atlas exited; CPU time 47964.446276
11:09:38 (9521): called boinc_finish(0)

</stderr_txt>
]]>

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