Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:40:10 (13348): wrapper (7.7.26015): starting
17:40:10 (13348): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 17:40:10] Arguments: --nthreads 8
[2026-03-04 17:40:10] Threads: 8
[2026-03-04 17:40:10] Checking for CVMFS
[2026-03-04 17:40:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 17:40:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 17:40:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 17:40:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 17:40:10] 2.11.2.0 2893 207446 78280 156893 3 50 16528487 20275200 1 130560 0 55074405 99.858 13597711 30123 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 17:40:10] CVMFS is ok
[2026-03-04 17:40:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 17:40:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 17:40:10] Further information can be found at the LHC@home message board.
[2026-03-04 17:40:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 17:40:10] Checking for apptainer binary...
[2026-03-04 17:40:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 17:40:10] Running /usr/bin/apptainer --version
[2026-03-04 17:40:10] apptainer version 1.3.2-1.el7
[2026-03-04 17:40:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 17:40:12] c-204-22.aglt2.org
[2026-03-04 17:40:12] apptainer works
[2026-03-04 17:40:12] Set ATHENA_PROC_NUMBER=8
[2026-03-04 17:40:12] Set ATHENA_CORE_NUMBER=8
[2026-03-04 17:40:12] Starting ATLAS job with PandaID=7038519930
[2026-03-04 17:40:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:29:47 (10212): wrapper (7.7.26015): starting
18:29:47 (10212): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 18:29:47] Arguments: --nthreads 8
[2026-03-04 18:29:47] Threads: 8
[2026-03-04 18:29:47] This job has been restarted, cleaning up previous attempt
[2026-03-04 18:29:47] Checking for CVMFS
[2026-03-04 18:29:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 18:29:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 18:29:47] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 18:29:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 18:29:47] 2.11.2.0 2893 207495 77520 156896 1 11 16622298 20275200 1 130560 0 55125133 99.859 13602095 30125 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 18:29:47] CVMFS is ok
[2026-03-04 18:29:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 18:29:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 18:29:47] Further information can be found at the LHC@home message board.
[2026-03-04 18:29:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 18:29:47] Checking for apptainer binary...
[2026-03-04 18:29:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 18:29:47] Running /usr/bin/apptainer --version
[2026-03-04 18:29:47] apptainer version 1.3.2-1.el7
[2026-03-04 18:29:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 18:29:49] c-204-22.aglt2.org
[2026-03-04 18:29:49] apptainer works
[2026-03-04 18:29:49] Set ATHENA_PROC_NUMBER=8
[2026-03-04 18:29:49] Set ATHENA_CORE_NUMBER=8
[2026-03-04 18:29:49] Starting ATLAS job with PandaID=7038519930
[2026-03-04 18:29:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 20:27:40]  *** The last 200 lines of the pilot log: ***
[2026-03-04 20:27:40] 2026-03-05 01:27:07,210 | INFO     | time since job start (7021s) is within the limit (349056.0s)
[2026-03-04 20:27:40] 2026-03-05 01:27:07,562 | INFO     | monitor loop #529: job 0:7038519930 is in state 'finished'
[2026-03-04 20:27:40] 2026-03-05 01:27:07,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,228 | INFO     | job 7038519930 has state=finished
[2026-03-04 20:27:40] 2026-03-05 01:27:08,228 | INFO     | preparing for final server update for job 7038519930 in state='finished'
[2026-03-04 20:27:40] 2026-03-05 01:27:08,228 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038519930/jobReport.json
[2026-03-04 20:27:40] 2026-03-05 01:27:08,232 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-04 20:27:40] 2026-03-05 01:27:08,232 | INFO     | this job has now completed (state=finished)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,232 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,233 | INFO     | log transfer has been attempted: DONE
[2026-03-04 20:27:40] 2026-03-05 01:27:08,233 | INFO     | job 7038519930 has finished - writing final server update
[2026-03-04 20:27:40] 2026-03-05 01:27:08,233 | INFO     | total number of processed events: 400 (read)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,235 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038519930/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,235 | INFO     | extracted standard info from prmon json
[2026-03-04 20:27:40] 2026-03-05 01:27:08,235 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 20:27:40] 2026-03-05 01:27:08,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 20:27:40] 2026-03-05 01:27:08,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 20:27:40] 2026-03-05 01:27:08,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 20:27:40] 2026-03-05 01:27:08,238 | INFO     | fitting pss+swap vs Time
[2026-03-04 20:27:40] 2026-03-05 01:27:08,238 | INFO     | sum of square deviations: 471562330.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,239 | INFO     | sum of deviations: -3966819507.999999
[2026-03-04 20:27:40] 2026-03-05 01:27:08,239 | INFO     | mean x: 1772670510.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,239 | INFO     | mean y: 2553255.9826086955
[2026-03-04 20:27:40] 2026-03-05 01:27:08,239 | INFO     | intersect: 14914397381.284786
[2026-03-04 20:27:40] 2026-03-05 01:27:08,239 | INFO     | chi2: 1.602991548600323
[2026-03-04 20:27:40] 2026-03-05 01:27:08,240 | INFO     | sum of square deviations: 412686807.5
[2026-03-04 20:27:40] 2026-03-05 01:27:08,240 | INFO     | sum of deviations: -3122448632.4999967
[2026-03-04 20:27:40] 2026-03-05 01:27:08,240 | INFO     | mean x: 1772670357.5
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | mean y: 2555445.209090909
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | intersect: 13414838157.079292
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | chi2: 1.6046990961024454
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | current chi2=1.6046990961024454 (change=-0.10652255176350758 %)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | right removable region: 109
[2026-03-04 20:27:40] 2026-03-05 01:27:08,241 | INFO     | sum of square deviations: 412686807.5
[2026-03-04 20:27:40] 2026-03-05 01:27:08,242 | INFO     | sum of deviations: -21392673373.5
[2026-03-04 20:27:40] 2026-03-05 01:27:08,242 | INFO     | mean x: 1772670662.5
[2026-03-04 20:27:40] 2026-03-05 01:27:08,242 | INFO     | mean y: 2597508.6272727274
[2026-03-04 20:27:40] 2026-03-05 01:27:08,242 | INFO     | intersect: 91893503136.00998
[2026-03-04 20:27:40] 2026-03-05 01:27:08,243 | INFO     | chi2: 0.11230107769032317
[2026-03-04 20:27:40] 2026-03-05 01:27:08,243 | INFO     | current chi2=0.11230107769032317 (change=92.99428136172142 %)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,243 | INFO     | sum of square deviations: 358927660.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,243 | INFO     | sum of deviations: -20280933763.999996
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | mean x: 1772670815.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | mean y: 2594232.123809524
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | intersect: 100166007061.30194
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | chi2: 0.09446548460853943
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | current chi2=0.09446548460853943 (change=15.881942941782304 %)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,244 | INFO     | left removable region: 20
[2026-03-04 20:27:40] 2026-03-05 01:27:08,245 | INFO     | sum of square deviations: 218571540.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,245 | INFO     | sum of deviations: -13535632758.999998
[2026-03-04 20:27:40] 2026-03-05 01:27:08,245 | INFO     | mean x: 1772670937.0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,245 | INFO     | mean y: 2580904.393258427
[2026-03-04 20:27:40] 2026-03-05 01:27:08,245 | INFO     | intersect: 109780014900.53212
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | chi2: 0.08676371274720078
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | current memory leak: -61.93 B/s (using 89 data points, chi2=0.09)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | could have reported an average CPU frequency of 1695 MHz (7 samples)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | ..............................
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | . Timing measurements:
[2026-03-04 20:27:40] 2026-03-05 01:27:08,246 | INFO     | . get job = 0 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . initial setup = 1 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . payload setup = 8 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . stage-in = 0 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . payload execution = 6994 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . stage-out = 0 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | . log creation = 0 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,247 | INFO     | ..............................
[2026-03-04 20:27:40] 2026-03-05 01:27:08,330 | INFO     | 
[2026-03-04 20:27:40] 2026-03-05 01:27:08,330 | INFO     | job summary report
[2026-03-04 20:27:40] 2026-03-05 01:27:08,330 | INFO     | --------------------------------------------------
[2026-03-04 20:27:40] 2026-03-05 01:27:08,330 | INFO     | PanDA job id: 7038519930
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | task id: 48955010
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | errors: (none)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | pilot state: finished 
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | transexitcode: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | exeerrorcode: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | exeerrordiag: 
[2026-03-04 20:27:40] 2026-03-05 01:27:08,331 | INFO     | exitcode: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | exitmsg: OK
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | cpuconsumptiontime: 52352 s
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | nevents: 400
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | neventsw: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | pid: 16589
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | pgrp: 16589
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | corecount: 8
[2026-03-04 20:27:40] 2026-03-05 01:27:08,332 | INFO     | event service: False
[2026-03-04 20:27:40] 2026-03-05 01:27:08,333 | INFO     | sizes: {0: 2294660, 1: 2295778, 12: 2295778, 7006: 2322988, 7007: 2322987, 7008: 2332041, 7009: 2332225, 7010: 2332419}
[2026-03-04 20:27:40] 2026-03-05 01:27:08,333 | INFO     | --------------------------------------------------
[2026-03-04 20:27:40] 2026-03-05 01:27:08,333 | INFO     | 
[2026-03-04 20:27:40] 2026-03-05 01:27:08,333 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 20:27:40] 2026-03-05 01:27:08,361 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,361 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,361 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 20:27:40] 2026-03-05 01:27:08,365 | INFO     | job 7038519930 has completed (purged errors)
[2026-03-04 20:27:40] 2026-03-05 01:27:08,365 | INFO     | overall cleanup function is called
[2026-03-04 20:27:40] 2026-03-05 01:27:09,373 | INFO     | --- collectZombieJob: --- 10, [16589]
[2026-03-04 20:27:40] 2026-03-05 01:27:09,373 | INFO     | zombie collector waiting for pid 16589
[2026-03-04 20:27:40] 2026-03-05 01:27:09,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 20:27:40] 2026-03-05 01:27:09,383 | INFO     | collected zombie processes
[2026-03-04 20:27:40] 2026-03-05 01:27:09,384 | INFO     | will attempt to kill all subprocesses of pid=16589
[2026-03-04 20:27:40] 2026-03-05 01:27:09,477 | INFO     | process IDs to be killed: [16589] (in reverse order)
[2026-03-04 20:27:40] 2026-03-05 01:27:09,540 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 20:27:40] 2026-03-05 01:27:09,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 20:27:40] 2026-03-05 01:27:09,545 | INFO     | did not find any defunct processes belonging to 16589
[2026-03-04 20:27:40] 2026-03-05 01:27:09,548 | INFO     | did not find any defunct processes belonging to 16589
[2026-03-04 20:27:40] 2026-03-05 01:27:09,549 | INFO     | ready for new job
[2026-03-04 20:27:40] 2026-03-05 01:27:09,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 20:27:40] 2026-03-05 01:27:09,550 | INFO     | **************************************
[2026-03-04 20:27:40] 2026-03-05 01:27:09,551 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 20:27:40] 2026-03-05 01:27:09,551 | INFO     | **************************************
[2026-03-04 20:27:40] 2026-03-05 01:27:09,551 | INFO     | 
[2026-03-04 20:27:40] 2026-03-05 01:27:09,552 | INFO     | architecture information:
[2026-03-04 20:27:40] 2026-03-05 01:27:09,552 | INFO     | executing command: cat /etc/os-release
[2026-03-04 20:27:40] 2026-03-05 01:27:09,571 | INFO     | cat /etc/os-release:
[2026-03-04 20:27:40] NAME="CentOS Linux"
[2026-03-04 20:27:40] VERSION="7 (Core)"
[2026-03-04 20:27:40] ID="centos"
[2026-03-04 20:27:40] ID_LIKE="rhel fedora"
[2026-03-04 20:27:40] VERSION_ID="7"
[2026-03-04 20:27:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 20:27:40] ANSI_COLOR="0;31"
[2026-03-04 20:27:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 20:27:40] HOME_URL="https://www.centos.org/"
[2026-03-04 20:27:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 20:27:40] 
[2026-03-04 20:27:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 20:27:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 20:27:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 20:27:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 20:27:40] 
[2026-03-04 20:27:40] 2026-03-05 01:27:09,571 | INFO     | **************************************
[2026-03-04 20:27:40] 2026-03-05 01:27:10,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 20:27:40] 2026-03-05 01:27:10,096 | INFO     | sufficient remaining disk space (18092130304 B)
[2026-03-04 20:27:40] 2026-03-05 01:27:10,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 20:27:40] 2026-03-05 01:27:10,096 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 20:27:40] 2026-03-05 01:27:10,097 | INFO     | update_server=False
[2026-03-04 20:27:40] 2026-03-05 01:27:10,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 20:27:40] 2026-03-05 01:27:10,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:27:40] 2026-03-05 01:27:10,185 | INFO     | all payload control threads have been joined
[2026-03-04 20:27:40] 2026-03-05 01:27:10,285 | INFO     | all job control threads have been joined
[2026-03-04 20:27:40] 2026-03-05 01:27:10,697 | INFO     | all data control threads have been joined
[2026-03-04 20:27:40] 2026-03-05 01:27:11,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:27:40] 2026-03-05 01:27:11,071 | INFO     | aborting loop
[2026-03-04 20:27:40] 2026-03-05 01:27:11,100 | INFO     | [job] retrieve thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,103 | INFO     | [job] queue monitor thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,120 | INFO     | [job] validate thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,190 | INFO     | [payload] control thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 20:27:40] 2026-03-05 01:27:11,290 | INFO     | [job] control thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,386 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,661 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,662 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:11,700 | INFO     | [data] control thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,062 | INFO     | [payload] validate_post thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,076 | INFO     | [job] job monitor thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,346 | INFO     | [data] copytool_in thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,465 | INFO     | [payload] failed_post thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,501 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:12,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 20:27:40] 2026-03-05 01:27:13,197 | INFO     | [data] copytool_out thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:16,716 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 20:27:40] 2026-03-05 01:27:16,995 | INFO     | [monitor] cgroup control has ended
[2026-03-04 20:27:40] 2026-03-05 01:27:17,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862050121536)>', '<ExcThread(monitor, started 139861751215872)>']
[2026-03-04 20:27:40] 2026-03-05 01:27:22,120 | INFO     | all workflow threads have been joined
[2026-03-04 20:27:40] 2026-03-05 01:27:22,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 20:27:40] 2026-03-05 01:27:22,121 | INFO     | traces error code: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:22,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 20:27:40] 2026-03-05 01:27:40,332 | INFO     | PID=14116 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 20:27:40] 2026-03-05 01:27:40,332 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 20:27:40] 2026-03-05 01:27:40,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 20:27:40] 2026-03-05 01:27:40,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 20:27:40] 2026-03-05 01:27:40,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 20:27:40] 2026-03-05 01:27:40,333 | INFO     | [monitor] control thread has ended
[2026-03-04 20:27:40] 2026-03-05 01:27:40,452 [wrapper] ==== pilot stdout END ====
[2026-03-04 20:27:40] 2026-03-05 01:27:40,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 20:27:40] 2026-03-05 01:27:40,462 [wrapper] pilotpid: 14116
[2026-03-04 20:27:40] 2026-03-05 01:27:40,467 [wrapper] Pilot exit status: 0
[2026-03-04 20:27:40] 2026-03-05 01:27:40,486 [wrapper] pandaids: 7038519930 7038519930
[2026-03-04 20:27:40] 2026-03-05 01:27:40,535 [wrapper] cleanup supervisor_pilot 26648 14117
[2026-03-04 20:27:40] 2026-03-05 01:27:40,540 [wrapper] Test setup, not cleaning
[2026-03-04 20:27:40] 2026-03-05 01:27:40,545 [wrapper] apfmon messages muted
[2026-03-04 20:27:40] 2026-03-05 01:27:40,549 [wrapper] ==== wrapper stdout END ====
[2026-03-04 20:27:40] 2026-03-05 01:27:40,554 [wrapper] ==== wrapper stderr END ====
[2026-03-04 20:27:40]  *** Error codes and diagnostics ***
[2026-03-04 20:27:40]     "exeErrorCode": 0,
[2026-03-04 20:27:40]     "exeErrorDiag": "",
[2026-03-04 20:27:40]     "pilotErrorCode": 0,
[2026-03-04 20:27:40]     "pilotErrorDiag": "",
[2026-03-04 20:27:40]  *** Listing of results directory ***
[2026-03-04 20:27:40] total 1048548
[2026-03-04 20:27:40] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 13:35 pilot3.tar.gz
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 13:38 queuedata.json
[2026-03-04 20:27:40] -rwx------ 1 boincer umatlas     36322 Mar  4 13:38 runpilot2-wrapper.sh
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas       100 Mar  4 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 20:27:40] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 17:40 run_atlas
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas       105 Mar  4 17:40 job.xml
[2026-03-04 20:27:40] -rw-r--r-- 3 boincer umatlas 442457117 Mar  4 17:40 EVNT.46701403._001058.pool.root.1
[2026-03-04 20:27:40] -rw-r--r-- 3 boincer umatlas 442457117 Mar  4 17:40 ATLAS.root_0
[2026-03-04 20:27:40] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 17:40 start_atlas.sh
[2026-03-04 20:27:40] drwxrwx--x 2 boincer umatlas      4096 Mar  4 17:40 shared
[2026-03-04 20:27:40] -rw-r--r-- 2 boincer umatlas    597955 Mar  4 17:40 input.tar.gz
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas         0 Mar  4 17:40 boinc_lockfile
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas   1521291 Mar  4 17:40 agis_ddmendpoints.agis.ALL.json
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas      2561 Mar  4 18:29 pandaJob.out
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas        57 Mar  4 18:29 setup.sh.local
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas    997765 Mar  4 18:30 agis_schedconf.cvmfs.json
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas       432 Mar  4 18:30 workernode_map.json
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas      5910 Mar  4 20:19 init_data.xml
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas 182090448 Mar  4 20:26 HITS.48955010._002890.pool.root.1
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas       530 Mar  4 20:26 boinc_task_state.xml
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas        96 Mar  4 20:26 pilot_heartbeat.json
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas      1062 Mar  4 20:27 memory_monitor_summary.json
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas    390481 Mar  4 20:27 log.48955010._002890.job.log.tgz.1
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas      6408 Mar  4 20:27 heartbeat.json
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas        27 Mar  4 20:27 wrapper_checkpoint.txt
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas      8192 Mar  4 20:27 boinc_mmap_file
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas       745 Mar  4 20:27 pilotlog.txt
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas    991917 Mar  4 20:27 log.48955010._002890.job.log.1
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas       357 Mar  4 20:27 output.list
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas       620 Mar  4 20:27 runtime_log
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas   1402880 Mar  4 20:27 result.tar.gz
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas      9426 Mar  4 20:27 runtime_log.err
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas       783 Mar  4 20:27 4b5KDmFI6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYRJLDm4WX9Do.diag
[2026-03-04 20:27:40] -rw-r--r-- 1 boincer umatlas     23443 Mar  4 20:27 stderr.txt
[2026-03-04 20:27:40] HITS file was successfully produced:
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas 182090448 Mar  4 20:26 shared/HITS.pool.root.1
[2026-03-04 20:27:40]  *** Contents of shared directory: ***
[2026-03-04 20:27:40] total 611888
[2026-03-04 20:27:40] -rw-r--r-- 3 boincer umatlas 442457117 Mar  4 17:40 ATLAS.root_0
[2026-03-04 20:27:40] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 17:40 start_atlas.sh
[2026-03-04 20:27:40] -rw-r--r-- 2 boincer umatlas    597955 Mar  4 17:40 input.tar.gz
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas 182090448 Mar  4 20:26 HITS.pool.root.1
[2026-03-04 20:27:40] -rw------- 1 boincer umatlas   1402880 Mar  4 20:27 result.tar.gz
20:27:42 (10212): run_atlas exited; CPU time 52293.112874
20:27:42 (10212): called boinc_finish(0)

</stderr_txt>
]]>

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