Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:52 (1574599): wrapper (7.7.26015): starting
09:35:52 (1574599): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 09:35:52] Arguments: --nthreads 4
[2026-03-05 09:35:52] Threads: 4
[2026-03-05 09:35:52] Checking for CVMFS
[2026-03-05 09:35:52] No cvmfs_config command found, will try listing directly
[2026-03-05 09:35:52] CVMFS is ok
[2026-03-05 09:35:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 09:35:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 09:35:52] Further information can be found at the LHC@home message board.
[2026-03-05 09:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 09:35:52] Checking for apptainer binary...
[2026-03-05 09:35:52] which: no apptainer in ((null))
[2026-03-05 09:35:52] apptainer is not installed, using version from CVMFS
[2026-03-05 09:35:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 09:35:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-05 09:35:52] apptainer works
[2026-03-05 09:35:52] Set ATHENA_PROC_NUMBER=4
[2026-03-05 09:35:52] Set ATHENA_CORE_NUMBER=4
[2026-03-05 09:35:52] Starting ATLAS job with PandaID=7030293576
[2026-03-05 09:35:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 11:11:20]  *** The last 200 lines of the pilot log: ***
[2026-03-05 11:11:20]  lfn=log.48838615._000121.job.log.tgz.1
[2026-03-05 11:11:20]  mtime=0
[2026-03-05 11:11:20]  protocol_id=None
[2026-03-05 11:11:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 11:11:20]  replicas=None
[2026-03-05 11:11:20]  scope=mc23_13p6TeV
[2026-03-05 11:11:20]  status=None
[2026-03-05 11:11:20]  status_code=0
[2026-03-05 11:11:20]  storage_token=
[2026-03-05 11:11:20]  surl=/var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7030293576/log.48838615._000121.job.log.tgz.1
[2026-03-05 11:11:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/19/log.48838615._000121.job.log.tgz.1
[2026-03-05 11:11:20]  workdir=None
[2026-03-05 11:11:20] ]
[2026-03-05 11:11:20] 2026-03-05 10:10:16,637 | INFO     | transferring file log.48838615._000121.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7030293576/log.48838615._000121.job.log.tgz.1 to /var/lib/
[2026-03-05 11:11:20] 2026-03-05 10:10:16,637 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7030293576/log.48838615._000121.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/0/
[2026-03-05 11:11:20] 2026-03-05 10:10:16,655 | INFO     | adding to output.list: log.48838615._000121.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/19/log.48838615._000121.job.log.tg
[2026-03-05 11:11:20] 2026-03-05 10:10:16,656 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 11:11:20] 2026-03-05 10:10:16,656 | INFO     | summary of transferred files:
[2026-03-05 11:11:20] 2026-03-05 10:10:16,656 | INFO     |  -- lfn=log.48838615._000121.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 11:11:20] 2026-03-05 10:10:16,656 | INFO     | stage-out finished correctly
[2026-03-05 11:11:20] 2026-03-05 10:10:17,021 | INFO     | PID=1579175 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 11:11:20] 2026-03-05 10:10:17,021 | INFO     | .. there are 45 such processes running
[2026-03-05 11:11:20] 2026-03-05 10:10:17,508 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 11:11:20] 2026-03-05 10:10:18,021 | INFO     | time since job start (5653s) is within the limit (349056.0s)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,361 | INFO     | job 7030293576 has state=finished
[2026-03-05 11:11:20] 2026-03-05 10:10:18,362 | INFO     | preparing for final server update for job 7030293576 in state='finished'
[2026-03-05 11:11:20] 2026-03-05 10:10:18,362 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7030293576/jobReport.json
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/0/workernode_map.json
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | this job has now completed (state=finished)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | log transfer has been attempted: DONE
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | job 7030293576 has finished - writing final server update
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19564/.job.ad'
[2026-03-05 11:11:20] 2026-03-05 10:10:18,364 | INFO     | total number of processed events: 400 (read)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,383 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7030293576/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,384 | INFO     | extracted standard info from prmon json
[2026-03-05 11:11:20] 2026-03-05 10:10:18,384 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 11:11:20] 2026-03-05 10:10:18,384 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 11:11:20] 2026-03-05 10:10:18,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 11:11:20] 2026-03-05 10:10:18,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 11:11:20] 2026-03-05 10:10:18,385 | INFO     | fitting pss+swap vs Time
[2026-03-05 11:11:20] 2026-03-05 10:10:18,385 | INFO     | sum of square deviations: 197203697.5
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | sum of deviations: -998019841.0000001
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | mean x: 1772702683.5
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | mean y: 2350582.8604651163
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | intersect: 8973746518.917616
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | chi2: 0.0023041142342826782
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | current memory leak: -5.06 B/s (using 86 data points, chi2=0.00)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | could have reported an average CPU frequency of 3578 MHz (7 samples)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | ..............................
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . Timing measurements:
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . get job = 0 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . initial setup = 4 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . payload setup = 5 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . stage-in = 0 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . payload execution = 5630 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,386 | INFO     | . stage-out = 0 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,387 | INFO     | . log creation = 0 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,387 | INFO     | ..............................
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | 
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | job summary report
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | --------------------------------------------------
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | PanDA job id: 7030293576
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | task id: 48838615
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | errors: (none)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | pilot state: finished 
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | transexitcode: 0
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | exeerrorcode: 0
[2026-03-05 11:11:20] 2026-03-05 10:10:18,438 | INFO     | exeerrordiag: 
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | exitcode: 0
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | exitmsg: OK
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | cpuconsumptiontime: 21679 s
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | nevents: 400
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | neventsw: 0
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | pid: 1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | pgrp: 1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | corecount: 4
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | event service: False
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | sizes: {0: 2295822, 10: 2295822, 5639: 2331514, 5640: 2331514, 5641: 2331708}
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | --------------------------------------------------
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | 
[2026-03-05 11:11:20] 2026-03-05 10:10:18,439 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/0
[2026-03-05 11:11:20] 2026-03-05 10:10:18,459 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | job 7030293576 has completed (purged errors)
[2026-03-05 11:11:20] 2026-03-05 10:10:18,460 | INFO     | overall cleanup function is called
[2026-03-05 11:11:20] 2026-03-05 10:10:19,467 | INFO     | --- collectZombieJob: --- 10, [1585177]
[2026-03-05 11:11:20] 2026-03-05 10:10:19,467 | INFO     | zombie collector waiting for pid 1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:19,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 11:11:20] 2026-03-05 10:10:19,467 | INFO     | collected zombie processes
[2026-03-05 11:11:20] 2026-03-05 10:10:19,467 | INFO     | will attempt to kill all subprocesses of pid=1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:19,945 | INFO     | process IDs to be killed: [1585177] (in reverse order)
[2026-03-05 11:11:20] 2026-03-05 10:10:20,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 11:11:20] 2026-03-05 10:10:20,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 11:11:20] 2026-03-05 10:10:20,216 | INFO     | did not find any defunct processes belonging to 1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:20,246 | INFO     | did not find any defunct processes belonging to 1585177
[2026-03-05 11:11:20] 2026-03-05 10:10:20,247 | INFO     | ready for new job
[2026-03-05 11:11:20] 2026-03-05 10:10:20,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 11:11:20] 2026-03-05 10:10:20,248 | INFO     | **************************************
[2026-03-05 11:11:20] 2026-03-05 10:10:20,252 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 11:11:20] 2026-03-05 10:10:20,252 | INFO     | **************************************
[2026-03-05 11:11:20] 2026-03-05 10:10:20,252 | INFO     | 
[2026-03-05 11:11:20] 2026-03-05 10:10:20,257 | INFO     | architecture information:
[2026-03-05 11:11:20] 2026-03-05 10:10:20,258 | INFO     | executing command: cat /etc/os-release
[2026-03-05 11:11:20] 2026-03-05 10:10:20,271 | INFO     | cat /etc/os-release:
[2026-03-05 11:11:20] NAME="CentOS Linux"
[2026-03-05 11:11:20] VERSION="7 (Core)"
[2026-03-05 11:11:20] ID="centos"
[2026-03-05 11:11:20] ID_LIKE="rhel fedora"
[2026-03-05 11:11:20] VERSION_ID="7"
[2026-03-05 11:11:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 11:11:20] ANSI_COLOR="0;31"
[2026-03-05 11:11:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 11:11:20] HOME_URL="https://www.centos.org/"
[2026-03-05 11:11:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 11:11:20] 
[2026-03-05 11:11:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 11:11:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 11:11:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 11:11:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 11:11:20] 
[2026-03-05 11:11:20] 2026-03-05 10:10:20,271 | INFO     | **************************************
[2026-03-05 11:11:20] 2026-03-05 10:10:20,774 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-05 11:11:20] 2026-03-05 10:10:20,792 | INFO     | sufficient remaining disk space (19212009472 B)
[2026-03-05 11:11:20] 2026-03-05 10:10:20,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 11:11:20] 2026-03-05 10:10:20,792 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 11:11:20] 2026-03-05 10:10:20,792 | INFO     | update_server=False
[2026-03-05 11:11:20] 2026-03-05 10:10:20,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 11:11:20] 2026-03-05 10:10:20,807 | INFO     | all payload control threads have been joined
[2026-03-05 11:11:20] 2026-03-05 10:10:21,041 | INFO     | all data control threads have been joined
[2026-03-05 11:11:20] 2026-03-05 10:10:21,797 | INFO     | [job] retrieve thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:21,812 | INFO     | [payload] control thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:21,844 | INFO     | all job control threads have been joined
[2026-03-05 11:11:20] 2026-03-05 10:10:22,008 | WARNING  | process 1585177 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 11:11:20] 2026-03-05 10:10:22,046 | INFO     | [data] control thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,116 | INFO     | [job] validate thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 11:11:20] 2026-03-05 10:10:22,327 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 11:11:20] 2026-03-05 10:10:22,500 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,565 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,650 | INFO     | [payload] failed_post thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,718 | INFO     | [data] copytool_in thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,783 | INFO     | number of running child processes to parent process 1585177: 1
[2026-03-05 11:11:20] 2026-03-05 10:10:22,783 | INFO     | maximum number of monitored processes: 6
[2026-03-05 11:11:20] 2026-03-05 10:10:22,783 | INFO     | aborting job monitoring since job object (job id=7030293576) has expired
[2026-03-05 11:11:20] 2026-03-05 10:10:22,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:11:20] 2026-03-05 10:10:22,783 | INFO     | will abort loop
[2026-03-05 11:11:20] 2026-03-05 10:10:22,850 | INFO     | [job] control thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:22,913 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:23,373 | INFO     | [payload] validate_post thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:23,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:11:20] 2026-03-05 10:10:23,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 11:11:20] 2026-03-05 10:10:23,788 | INFO     | [job] job monitor thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:24,225 | INFO     | [data] copytool_out thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:24,452 | INFO     | [job] queue monitor thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:27,565 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:30,886 | INFO     | job.realtimelogging is not enabled
[2026-03-05 11:11:20] 2026-03-05 10:10:31,891 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 11:11:20] 2026-03-05 10:10:51,658 | INFO     | PID=1579175 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 11:11:20] 2026-03-05 10:10:51,658 | INFO     | .. there are 45 such processes running
[2026-03-05 11:11:20] 2026-03-05 10:10:51,658 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 11:11:20] 2026-03-05 10:10:51,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 11:11:20] 2026-03-05 10:10:51,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 11:11:20] 2026-03-05 10:11:14,659 | INFO     | [monitor] cgroup control has ended
[2026-03-05 11:11:20] 2026-03-05 10:11:14,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22558520215360)>', '<ExcThread(monitor, started 22558270543616)>']
[2026-03-05 11:11:20] 2026-03-05 10:11:14,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 11:11:20] 2026-03-05 10:11:14,770 | INFO     | [monitor] control thread has ended
[2026-03-05 11:11:20] 2026-03-05 10:11:19,684 | INFO     | all workflow threads have been joined
[2026-03-05 11:11:20] 2026-03-05 10:11:19,684 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 11:11:20] 2026-03-05 10:11:19,684 | INFO     | traces error code: 0
[2026-03-05 11:11:20] 2026-03-05 10:11:19,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 11:11:20] 2026-03-05 10:11:19,834 [wrapper] ==== pilot stdout END ====
[2026-03-05 11:11:20] 2026-03-05 10:11:19,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 11:11:20] 2026-03-05 10:11:19,840 [wrapper] pilotpid: 1579175
[2026-03-05 11:11:20] 2026-03-05 10:11:19,842 [wrapper] Pilot exit status: 0
[2026-03-05 11:11:20] 2026-03-05 10:11:19,850 [wrapper] pandaids: 7030293576
[2026-03-05 11:11:20] 2026-03-05 10:11:19,983 [wrapper] cleanup supervisor_pilot 2439899 1579176
[2026-03-05 11:11:20] 2026-03-05 10:11:19,986 [wrapper] Test setup, not cleaning
[2026-03-05 11:11:20] 2026-03-05 10:11:19,988 [wrapper] apfmon messages muted
[2026-03-05 11:11:20] 2026-03-05 10:11:19,990 [wrapper] ==== wrapper stdout END ====
[2026-03-05 11:11:20] 2026-03-05 10:11:19,992 [wrapper] ==== wrapper stderr END ====
[2026-03-05 11:11:20]  *** Error codes and diagnostics ***
[2026-03-05 11:11:20]     "exeErrorCode": 0,
[2026-03-05 11:11:20]     "exeErrorDiag": "",
[2026-03-05 11:11:20]     "pilotErrorCode": 0,
[2026-03-05 11:11:20]     "pilotErrorDiag": "",
[2026-03-05 11:11:20]  *** Listing of results directory ***
[2026-03-05 11:11:20] total 472716
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc    584627 Feb 25 16:36 pilot3.tar.gz
[2026-03-05 11:11:20] -rwx------. 1 boinc boinc     36322 Feb 25 16:41 runpilot2-wrapper.sh
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc      5111 Feb 25 16:46 queuedata.json
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc       100 Mar  5 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 11:11:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 09:35 run_atlas
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc       105 Mar  5 09:35 job.xml
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc      6705 Mar  5 09:35 init_data.xml
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc 272776972 Mar  5 09:35 EVNT.48343789._000005.pool.root.1
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc     15845 Mar  5 09:35 start_atlas.sh
[2026-03-05 11:11:20] drwxrwx--x. 2 boinc boinc      4096 Mar  5 09:35 shared
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc    597956 Mar  5 09:35 input.tar.gz
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc         0 Mar  5 09:35 boinc_lockfile
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc      2566 Mar  5 09:35 pandaJob.out
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc    997727 Mar  5 09:36 agis_schedconf.cvmfs.json
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc   1521291 Mar  5 09:36 agis_ddmendpoints.agis.ALL.json
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc       444 Mar  5 09:36 workernode_map.json
[2026-03-05 11:11:20] drwx------. 5 boinc boinc      4096 Mar  5 09:36 pilot3
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc 205128323 Mar  5 11:09 HITS.48838615._000121.pool.root.1
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc        95 Mar  5 11:09 pilot_heartbeat.json
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc       529 Mar  5 11:10 boinc_task_state.xml
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc      1032 Mar  5 11:10 memory_monitor_summary.json
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc    289600 Mar  5 11:10 log.48838615._000121.job.log.tgz.1
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc      6350 Mar  5 11:10 heartbeat.json
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc      8192 Mar  5 11:11 boinc_mmap_file
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc        27 Mar  5 11:11 wrapper_checkpoint.txt
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc      5435 Mar  5 11:11 pilotlog.txt
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc    821378 Mar  5 11:11 log.48838615._000121.job.log.1
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc       357 Mar  5 11:11 output.list
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc       620 Mar  5 11:11 runtime_log
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc   1126400 Mar  5 11:11 result.tar.gz
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc       662 Mar  5 11:11 TwCMDmwBWF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQ5yKDmv21w7m.diag
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc      9221 Mar  5 11:11 runtime_log.err
[2026-03-05 11:11:20] -rw-r--r--. 1 boinc boinc     21592 Mar  5 11:11 stderr.txt
[2026-03-05 11:11:20] HITS file was successfully produced:
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc 205128323 Mar  5 11:09 shared/HITS.pool.root.1
[2026-03-05 11:11:20]  *** Contents of shared directory: ***
[2026-03-05 11:11:20] total 468416
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc 272776972 Mar  5 09:35 ATLAS.root_0
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc     15845 Mar  5 09:35 start_atlas.sh
[2026-03-05 11:11:20] -rw-r--r--. 2 boinc boinc    597956 Mar  5 09:35 input.tar.gz
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc 205128323 Mar  5 11:09 HITS.pool.root.1
[2026-03-05 11:11:20] -rw-------. 1 boinc boinc   1126400 Mar  5 11:11 result.tar.gz
11:11:21 (1574599): run_atlas exited; CPU time 21945.567989
11:11:21 (1574599): called boinc_finish(0)

</stderr_txt>
]]>

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