Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:09:36 (2810): wrapper (7.7.26015): starting
17:09:36 (2810): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 17:09:36] Arguments: --nthreads 8
[2026-03-04 17:09:36] Threads: 8
[2026-03-04 17:09:36] Checking for CVMFS
[2026-03-04 17:09:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 17:09:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 17:09:36] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 17:09:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 17:09:36] 2.11.2.0 5882 48843 72096 156891 2 52 16262625 20275201 1 130560 0 13017451 99.931 2936866 30191 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 17:09:36] CVMFS is ok
[2026-03-04 17:09:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 17:09:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 17:09:36] Further information can be found at the LHC@home message board.
[2026-03-04 17:09:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 17:09:36] Checking for apptainer binary...
[2026-03-04 17:09:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 17:09:36] Running /usr/bin/apptainer --version
[2026-03-04 17:09:37] apptainer version 1.3.2-1.el7
[2026-03-04 17:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 17:09:38] c-204-12.aglt2.org
[2026-03-04 17:09:38] apptainer works
[2026-03-04 17:09:38] Set ATHENA_PROC_NUMBER=8
[2026-03-04 17:09:38] Set ATHENA_CORE_NUMBER=8
[2026-03-04 17:09:38] Starting ATLAS job with PandaID=7040407076
[2026-03-04 17:09:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 19:22:20]  *** The last 200 lines of the pilot log: ***
[2026-03-04 19:22:20] 2026-03-05 00:21:19,878 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 19:22:20] 2026-03-05 00:21:19,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 19:22:20] 2026-03-05 00:21:19,879 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 19:22:20] 2026-03-05 00:21:19,881 | INFO     | fitting pss+swap vs Time
[2026-03-04 19:22:20] 2026-03-05 00:21:19,881 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,882 | INFO     | sum of deviations: 20689678660.000004
[2026-03-04 19:22:20] 2026-03-05 00:21:19,882 | INFO     | mean x: 1772666132.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,883 | INFO     | mean y: 2473481.3488372094
[2026-03-04 19:22:20] 2026-03-05 00:21:19,883 | INFO     | intersect: -55098495542.76734
[2026-03-04 19:22:20] 2026-03-05 00:21:19,883 | INFO     | chi2: 1.321977349703572
[2026-03-04 19:22:20] 2026-03-05 00:21:19,883 | INFO     | sum of square deviations: 591173875.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,884 | INFO     | sum of deviations: 19801239859.500004
[2026-03-04 19:22:20] 2026-03-05 00:21:19,884 | INFO     | mean x: 1772665979.5
[2026-03-04 19:22:20] 2026-03-05 00:21:19,884 | INFO     | mean y: 2471660.0241935486
[2026-03-04 19:22:20] 2026-03-05 00:21:19,884 | INFO     | intersect: -59372588259.28468
[2026-03-04 19:22:20] 2026-03-05 00:21:19,885 | INFO     | chi2: 1.322916921587836
[2026-03-04 19:22:20] 2026-03-05 00:21:19,885 | INFO     | current chi2=1.322916921587836 (change=-0.07107322107104548 %)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,885 | INFO     | right removable region: 123
[2026-03-04 19:22:20] 2026-03-05 00:21:19,885 | INFO     | sum of square deviations: 591173875.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,886 | INFO     | sum of deviations: 2895279813.5000005
[2026-03-04 19:22:20] 2026-03-05 00:21:19,886 | INFO     | mean x: 1772666284.5
[2026-03-04 19:22:20] 2026-03-05 00:21:19,886 | INFO     | mean y: 2509234.2338709678
[2026-03-04 19:22:20] 2026-03-05 00:21:19,886 | INFO     | intersect: -8679141167.832523
[2026-03-04 19:22:20] 2026-03-05 00:21:19,887 | INFO     | chi2: 0.003574280615545192
[2026-03-04 19:22:20] 2026-03-05 00:21:19,887 | INFO     | current chi2=0.003574280615545192 (change=99.72962618335733 %)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,887 | INFO     | sum of square deviations: 522502820.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | sum of deviations: 2152791931.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | mean x: 1772666437.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | mean y: 2510909.6386554623
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | intersect: -7301147282.920228
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | chi2: 0.00046544687223712823
[2026-03-04 19:22:20] 2026-03-05 00:21:19,888 | INFO     | current chi2=0.00046544687223712823 (change=86.97788667703324 %)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,889 | INFO     | sum of square deviations: 459366752.5
[2026-03-04 19:22:20] 2026-03-05 00:21:19,889 | INFO     | sum of deviations: 1618715794.4999998
[2026-03-04 19:22:20] 2026-03-05 00:21:19,889 | INFO     | mean x: 1772666589.5
[2026-03-04 19:22:20] 2026-03-05 00:21:19,889 | INFO     | mean y: 2512192.3245614036
[2026-03-04 19:22:20] 2026-03-05 00:21:19,889 | INFO     | intersect: -6244007372.249494
[2026-03-04 19:22:20] 2026-03-05 00:21:19,890 | INFO     | chi2: 0.00020695731566542215
[2026-03-04 19:22:20] 2026-03-05 00:21:19,890 | INFO     | current chi2=0.00020695731566542215 (change=55.53578120082737 %)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,890 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | sum of deviations: 1300566726.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | mean x: 1772666742.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | mean y: 2513028.5412844038
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | intersect: -5739158887.211882
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | chi2: 0.0001606674326482124
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | current chi2=0.0001606674326482124 (change=22.36687447765527 %)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,891 | INFO     | left removable region: 40
[2026-03-04 19:22:20] 2026-03-05 00:21:19,892 | INFO     | sum of square deviations: 177275882.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,892 | INFO     | sum of deviations: 460073468.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,892 | INFO     | mean x: 1772667169.0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,892 | INFO     | mean y: 2515391.3373493976
[2026-03-04 19:22:20] 2026-03-05 00:21:19,893 | INFO     | intersect: -4597981432.317276
[2026-03-04 19:22:20] 2026-03-05 00:21:19,893 | INFO     | chi2: 8.170063149299613e-05
[2026-03-04 19:22:20] 2026-03-05 00:21:19,893 | INFO     | current memory leak: 2.60 B/s (using 83 data points, chi2=0.00)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,893 | INFO     | could have reported an average CPU frequency of 1729 MHz (8 samples)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,893 | INFO     | ..............................
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . Timing measurements:
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . get job = 0 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . initial setup = 8 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . payload setup = 8 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . stage-in = 0 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . payload execution = 7850 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . stage-out = 0 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | . log creation = 0 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,894 | INFO     | ..............................
[2026-03-04 19:22:20] 2026-03-05 00:21:19,978 | INFO     | 
[2026-03-04 19:22:20] 2026-03-05 00:21:19,979 | INFO     | job summary report
[2026-03-04 19:22:20] 2026-03-05 00:21:19,979 | INFO     | --------------------------------------------------
[2026-03-04 19:22:20] 2026-03-05 00:21:19,979 | INFO     | PanDA job id: 7040407076
[2026-03-04 19:22:20] 2026-03-05 00:21:19,979 | INFO     | task id: 48973452
[2026-03-04 19:22:20] 2026-03-05 00:21:19,979 | INFO     | errors: (none)
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | pilot state: finished 
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | transexitcode: 0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | exeerrorcode: 0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | exeerrordiag: 
[2026-03-04 19:22:20] 2026-03-05 00:21:19,980 | INFO     | exitcode: 0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | exitmsg: OK
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | cpuconsumptiontime: 59298 s
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | nevents: 400
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | neventsw: 0
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | pid: 11075
[2026-03-04 19:22:20] 2026-03-05 00:21:19,981 | INFO     | pgrp: 11075
[2026-03-04 19:22:20] 2026-03-05 00:21:19,982 | INFO     | corecount: 8
[2026-03-04 19:22:20] 2026-03-05 00:21:19,982 | INFO     | event service: False
[2026-03-04 19:22:20] 2026-03-05 00:21:19,982 | INFO     | sizes: {0: 2295846, 11: 2295846, 7861: 2323517, 7862: 2323516, 7863: 2332570, 7866: 2332948}
[2026-03-04 19:22:20] 2026-03-05 00:21:19,982 | INFO     | --------------------------------------------------
[2026-03-04 19:22:20] 2026-03-05 00:21:19,982 | INFO     | 
[2026-03-04 19:22:20] 2026-03-05 00:21:19,983 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 19:22:20] 2026-03-05 00:21:20,011 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,015 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 19:22:20] 2026-03-05 00:21:20,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 19:22:20] 2026-03-05 00:21:20,018 | INFO     | job 7040407076 has completed (purged errors)
[2026-03-04 19:22:20] 2026-03-05 00:21:20,018 | INFO     | overall cleanup function is called
[2026-03-04 19:22:20] 2026-03-05 00:21:21,026 | INFO     | --- collectZombieJob: --- 10, [11075]
[2026-03-04 19:22:20] 2026-03-05 00:21:21,026 | INFO     | zombie collector waiting for pid 11075
[2026-03-04 19:22:20] 2026-03-05 00:21:21,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 19:22:20] 2026-03-05 00:21:21,027 | INFO     | collected zombie processes
[2026-03-04 19:22:20] 2026-03-05 00:21:21,027 | INFO     | will attempt to kill all subprocesses of pid=11075
[2026-03-04 19:22:20] 2026-03-05 00:21:21,119 | INFO     | process IDs to be killed: [11075] (in reverse order)
[2026-03-04 19:22:20] 2026-03-05 00:21:21,175 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 19:22:20] 2026-03-05 00:21:21,176 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 19:22:20] 2026-03-05 00:21:21,180 | INFO     | did not find any defunct processes belonging to 11075
[2026-03-04 19:22:20] 2026-03-05 00:21:21,184 | INFO     | did not find any defunct processes belonging to 11075
[2026-03-04 19:22:20] 2026-03-05 00:21:21,184 | INFO     | ready for new job
[2026-03-04 19:22:20] 2026-03-05 00:21:21,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 19:22:20] 2026-03-05 00:21:21,186 | INFO     | **************************************
[2026-03-04 19:22:20] 2026-03-05 00:21:21,186 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 19:22:20] 2026-03-05 00:21:21,186 | INFO     | **************************************
[2026-03-04 19:22:20] 2026-03-05 00:21:21,187 | INFO     | 
[2026-03-04 19:22:20] 2026-03-05 00:21:21,187 | INFO     | architecture information:
[2026-03-04 19:22:20] 2026-03-05 00:21:21,188 | INFO     | executing command: cat /etc/os-release
[2026-03-04 19:22:20] 2026-03-05 00:21:21,204 | INFO     | cat /etc/os-release:
[2026-03-04 19:22:20] NAME="CentOS Linux"
[2026-03-04 19:22:20] VERSION="7 (Core)"
[2026-03-04 19:22:20] ID="centos"
[2026-03-04 19:22:20] ID_LIKE="rhel fedora"
[2026-03-04 19:22:20] VERSION_ID="7"
[2026-03-04 19:22:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 19:22:20] ANSI_COLOR="0;31"
[2026-03-04 19:22:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 19:22:20] HOME_URL="https://www.centos.org/"
[2026-03-04 19:22:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 19:22:20] 
[2026-03-04 19:22:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 19:22:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 19:22:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 19:22:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 19:22:20] 
[2026-03-04 19:22:20] 2026-03-05 00:21:21,205 | INFO     | **************************************
[2026-03-04 19:22:20] 2026-03-05 00:21:21,707 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 19:22:20] 2026-03-05 00:21:21,726 | INFO     | sufficient remaining disk space (18513657856 B)
[2026-03-04 19:22:20] 2026-03-05 00:21:21,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 19:22:20] 2026-03-05 00:21:21,727 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 19:22:20] 2026-03-05 00:21:21,727 | INFO     | update_server=False
[2026-03-04 19:22:20] 2026-03-05 00:21:21,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 19:22:20] 2026-03-05 00:21:21,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:22:20] 2026-03-05 00:21:21,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 19:22:20] 2026-03-05 00:21:21,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:22:20] 2026-03-05 00:21:21,729 | INFO     | aborting loop
[2026-03-04 19:22:20] 2026-03-05 00:21:22,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 19:22:20] 2026-03-05 00:21:22,276 | INFO     | all job control threads have been joined
[2026-03-04 19:22:20] 2026-03-05 00:21:22,439 | INFO     | all data control threads have been joined
[2026-03-04 19:22:20] 2026-03-05 00:21:22,454 | INFO     | all payload control threads have been joined
[2026-03-04 19:22:20] 2026-03-05 00:21:22,729 | INFO     | [job] retrieve thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:22,730 | INFO     | [job] job monitor thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:22,733 | INFO     | [job] queue monitor thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:22,906 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,117 | INFO     | [payload] validate_post thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,216 | INFO     | [job] validate thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,224 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,236 | INFO     | [data] copytool_in thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,281 | INFO     | [job] control thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,444 | INFO     | [data] control thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,460 | INFO     | [payload] control thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:23,726 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:24,166 | INFO     | [payload] failed_post thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:24,225 | INFO     | [data] copytool_out thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:25,731 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:32,666 | INFO     | job.realtimelogging is not enabled
[2026-03-04 19:22:20] 2026-03-05 00:21:33,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 19:22:20] 2026-03-05 00:21:52,790 | INFO     | PID=6586 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-04 19:22:20] 2026-03-05 00:21:52,791 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 19:22:20] 2026-03-05 00:21:52,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 19:22:20] 2026-03-05 00:21:52,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 19:22:20] 2026-03-05 00:22:14,845 | INFO     | [monitor] cgroup control has ended
[2026-03-04 19:22:20] 2026-03-05 00:22:14,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738043131712)>', '<ExcThread(monitor, started 139737583032064)>']
[2026-03-04 19:22:20] 2026-03-05 00:22:15,907 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 19:22:20] 2026-03-05 00:22:15,907 | INFO     | [monitor] control thread has ended
[2026-03-04 19:22:20] 2026-03-05 00:22:20,001 | INFO     | all workflow threads have been joined
[2026-03-04 19:22:20] 2026-03-05 00:22:20,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 19:22:20] 2026-03-05 00:22:20,002 | INFO     | traces error code: 0
[2026-03-04 19:22:20] 2026-03-05 00:22:20,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 19:22:20] 2026-03-05 00:22:20,133 [wrapper] ==== pilot stdout END ====
[2026-03-04 19:22:20] 2026-03-05 00:22:20,138 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 19:22:20] 2026-03-05 00:22:20,142 [wrapper] pilotpid: 6586
[2026-03-04 19:22:20] 2026-03-05 00:22:20,147 [wrapper] Pilot exit status: 0
[2026-03-04 19:22:20] 2026-03-05 00:22:20,165 [wrapper] pandaids: 7040407076
[2026-03-04 19:22:20] 2026-03-05 00:22:20,214 [wrapper] cleanup supervisor_pilot 22526 6587
[2026-03-04 19:22:20] 2026-03-05 00:22:20,219 [wrapper] Test setup, not cleaning
[2026-03-04 19:22:20] 2026-03-05 00:22:20,223 [wrapper] apfmon messages muted
[2026-03-04 19:22:20] 2026-03-05 00:22:20,228 [wrapper] ==== wrapper stdout END ====
[2026-03-04 19:22:20] 2026-03-05 00:22:20,233 [wrapper] ==== wrapper stderr END ====
[2026-03-04 19:22:20]  *** Error codes and diagnostics ***
[2026-03-04 19:22:20]     "exeErrorCode": 0,
[2026-03-04 19:22:20]     "exeErrorDiag": "",
[2026-03-04 19:22:20]     "pilotErrorCode": 0,
[2026-03-04 19:22:20]     "pilotErrorDiag": "",
[2026-03-04 19:22:20]  *** Listing of results directory ***
[2026-03-04 19:22:20] total 439984
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 13:35 pilot3.tar.gz
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 13:38 queuedata.json
[2026-03-04 19:22:20] -rwx------ 1 boincer umatlas     36322 Mar  4 13:38 runpilot2-wrapper.sh
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas       100 Mar  4 17:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 19:22:20] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 17:09 run_atlas
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas       105 Mar  4 17:09 job.xml
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas 236263049 Mar  4 17:09 EVNT.48717224._000062.pool.root.1
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 17:09 start_atlas.sh
[2026-03-04 19:22:20] drwxrwx--x 2 boincer umatlas      4096 Mar  4 17:09 shared
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas    597948 Mar  4 17:09 input.tar.gz
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas         0 Mar  4 17:09 boinc_lockfile
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas      2595 Mar  4 17:09 pandaJob.out
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas        57 Mar  4 17:09 setup.sh.local
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas    997757 Mar  4 17:09 agis_schedconf.cvmfs.json
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas   1521291 Mar  4 17:09 agis_ddmendpoints.agis.ALL.json
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas       433 Mar  4 17:10 workernode_map.json
[2026-03-04 19:22:20] drwx------ 5 boincer umatlas      4096 Mar  4 17:10 pilot3
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas      5909 Mar  4 19:18 init_data.xml
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas 207365961 Mar  4 19:20 HITS.48973452._001538.pool.root.1
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas       529 Mar  4 19:21 boinc_task_state.xml
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas      1049 Mar  4 19:21 memory_monitor_summary.json
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas    375290 Mar  4 19:21 log.48973452._001538.job.log.tgz.1
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas      6394 Mar  4 19:21 heartbeat.json
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas        95 Mar  4 19:21 pilot_heartbeat.json
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas      8192 Mar  4 19:22 boinc_mmap_file
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas        27 Mar  4 19:22 wrapper_checkpoint.txt
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas      4813 Mar  4 19:22 pilotlog.txt
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas   1112368 Mar  4 19:22 log.48973452._001538.job.log.1
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas       357 Mar  4 19:22 output.list
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas       620 Mar  4 19:22 runtime_log
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas   1505280 Mar  4 19:22 result.tar.gz
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas       659 Mar  4 19:22 suWLDm0H6H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRSLLDmZRhPkm.diag
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas      9341 Mar  4 19:22 runtime_log.err
[2026-03-04 19:22:20] -rw-r--r-- 1 boincer umatlas     20854 Mar  4 19:22 stderr.txt
[2026-03-04 19:22:20] HITS file was successfully produced:
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas 207365961 Mar  4 19:20 shared/HITS.pool.root.1
[2026-03-04 19:22:20]  *** Contents of shared directory: ***
[2026-03-04 19:22:20] total 435312
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas 236263049 Mar  4 17:09 ATLAS.root_0
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 17:09 start_atlas.sh
[2026-03-04 19:22:20] -rw-r--r-- 2 boincer umatlas    597948 Mar  4 17:09 input.tar.gz
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas 207365961 Mar  4 19:20 HITS.pool.root.1
[2026-03-04 19:22:20] -rw------- 1 boincer umatlas   1505280 Mar  4 19:22 result.tar.gz
19:22:22 (2810): run_atlas exited; CPU time 59238.303600
19:22:22 (2810): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN