Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-04 21:12:01 (11200): vboxwrapper version 26210
2026-03-04 21:12:01 (11200): BOINC client version: 8.2.4
2026-03-04 21:12:01 (11200): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-04 21:12:01 (11200): Successfully copied 'init_data.xml' to the shared directory.
2026-03-04 21:12:02 (11200): Create VM. (boinc_deccf6d338ff258c, slot#3)
2026-03-04 21:12:02 (11200): Setting Memory Size for VM. (4400MB)
2026-03-04 21:12:02 (11200): Setting CPU Count for VM. (4)
2026-03-04 21:12:03 (11200): Setting Chipset Options for VM.
2026-03-04 21:12:03 (11200): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-04 21:12:03 (11200): Setting Boot Options for VM.
2026-03-04 21:12:04 (11200): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-04 21:12:04 (11200): Enabling VM Network Access.
2026-03-04 21:12:04 (11200): Disabling USB Support for VM.
2026-03-04 21:12:04 (11200): Disabling COM Port Support for VM.
2026-03-04 21:12:05 (11200): Disabling LPT Port Support for VM.
2026-03-04 21:12:05 (11200): Disabling Audio Support for VM.
2026-03-04 21:12:05 (11200): Disabling Clipboard Support for VM.
2026-03-04 21:12:05 (11200): Disabling Drag and Drop Support for VM.
2026-03-04 21:12:06 (11200): Adding storage controller(s) to VM.
2026-03-04 21:12:06 (11200): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-04 21:12:07 (11200): Adding VirtualBox Guest Additions to VM.
2026-03-04 21:12:07 (11200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-04 21:12:07 (11200): forwarding host port 53038 to guest port 80
2026-03-04 21:12:07 (11200): Enabling remote desktop for VM.
2026-03-04 21:12:08 (11200): Required extension pack not installed, remote desktop not enabled.
2026-03-04 21:12:08 (11200): Enabling shared directory for VM.
2026-03-04 21:12:08 (11200): Starting VM using VBoxManage interface. (boinc_deccf6d338ff258c, slot#3)
2026-03-04 21:12:12 (11200): Successfully started VM. (PID = '10044')
2026-03-04 21:12:12 (11200): Reporting VM Process ID to BOINC.
2026-03-04 21:12:12 (11200): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-04 21:12:12 (11200): Guest Log: CPUID EDX: 0x178bfbff
2026-03-04 21:12:12 (11200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-04 21:12:12 (11200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-04 21:12:12 (11200): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-04 21:12:12 (11200): Detected: Web Application Enabled (http://localhost:53038)
2026-03-04 21:12:12 (11200): Preference change detected
2026-03-04 21:12:12 (11200): Setting CPU throttle for VM. (60%)
2026-03-04 21:12:13 (11200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-04 21:12:14 (11200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-04 21:12:14 (11200): Guest Log: BIOS: Booting from Hard Disk...
2026-03-04 21:12:18 (11200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-04 21:12:18 (11200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-04 21:12:18 (11200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-04 21:12:30 (11200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-04 21:12:30 (11200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-04 21:12:45 (11200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000142 main     Log opened 2026-03-04T21:12:42.885864000Z
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000272 main     OS Product: Linux
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000306 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000338 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000384 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000385 main     Process ID: 1305
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.000385 main     Package type: LINUX_64BITS_GENERIC
2026-03-04 21:12:45 (11200): Guest Log: 00:00:00.003399 main     5.2.32 r132073 started. Verbose level = 0
2026-03-04 21:12:46 (11200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-04 21:12:46 (11200): Guest Log: [INFO] Mounting shared directory
2026-03-04 21:12:46 (11200): Guest Log: [INFO] Checking for init_data.xml
2026-03-04 21:12:51 (11200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-04 21:12:51 (11200): Guest Log: [INFO] Detected branch: prod
2026-03-04 21:12:51 (11200): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-04 21:12:51 (11200): Guest Log: Copying input files
2026-03-04 21:12:54 (11200): Guest Log: Copied input files into RunAtlas.
2026-03-04 21:12:54 (11200): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-04 21:12:54 (11200): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-04 21:12:54 (11200): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-04 21:12:54 (11200): Guest Log: Further information can be found at the LHC@home message board.
2026-03-04 21:12:55 (11200): Guest Log: 00:00:10.039759 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 963 035 000ns (GuestNow=1 772 676 774 870 723 000 ns GuestLast=1 772 658 762 907 688 000 ns fSetTimeLastLoop=true )
2026-03-04 21:13:02 (11200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-04 21:13:02 (11200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-04 21:13:02 (11200): Guest Log: 2.6.3.0 1585 0 30152 156898 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-04 21:13:04 (11200): Guest Log: copied the webapp to /var/www
2026-03-04 21:13:04 (11200): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-04 21:13:04 (11200): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-04 21:13:04 (11200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-04 21:13:04 (11200): Guest Log:  *** Starting ATLAS job. (PandaID=7040755980 taskID=48958577) ***
2026-03-04 22:52:46 (11200): Status Report: Elapsed Time: '6000.000000'
2026-03-04 22:52:46 (11200): Status Report: CPU Time: '11454.890625'
2026-03-05 00:33:22 (11200): Status Report: Elapsed Time: '12000.000000'
2026-03-05 00:33:22 (11200): Status Report: CPU Time: '24201.390625'
2026-03-05 02:13:55 (11200): Status Report: Elapsed Time: '18000.000000'
2026-03-05 02:13:55 (11200): Status Report: CPU Time: '36793.625000'
2026-03-05 02:17:28 (11200): Guest Log:  *** Job finished ***
2026-03-05 02:17:28 (11200): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:16:50,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:16:50,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:19,266 | INFO     | [monitor] cgroup control has ended
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:21,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139837794907968)>', '<ExcThread(monitor, started 139837222942464)>']
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:21,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:21,137 | INFO     | [monitor] control thread has ended
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,119 | INFO     | all workflow threads have been joined
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,119 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,119 | INFO     | traces error code: 0
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,249 [wrapper] ==== pilot stdout END ====
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,256 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,262 [wrapper] pilotpid: 5994
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,286 [wrapper] Pilot exit status: 0
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,465 [wrapper] pandaids: 7040755980
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,633 [wrapper] cleanup supervisor_pilot 29680 5995
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,641 [wrapper] Test setup, not cleaning
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,728 [wrapper] apfmon messages muted
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,761 [wrapper] ==== wrapper stdout END ====
2026-03-05 02:17:28 (11200): Guest Log: 2026-03-05 07:17:26,768 [wrapper] ==== wrapper stderr END ====
2026-03-05 02:17:28 (11200): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 02:17:28 (11200): Guest Log:     "exeErrorCode": 0,
2026-03-05 02:17:28 (11200): Guest Log:     "exeErrorDiag": "",
2026-03-05 02:17:28 (11200): Guest Log:     "pilotErrorCode": 0,
2026-03-05 02:17:28 (11200): Guest Log:     "pilotErrorDiag": "",
2026-03-05 02:17:28 (11200): Guest Log:  *** Listing of results directory ***
2026-03-05 02:17:28 (11200): Guest Log: total 196200
2026-03-05 02:17:28 (11200): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 21:47 pilot3.tar.gz
2026-03-05 02:17:28 (11200): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 21:47 runpilot2-wrapper.sh
2026-03-05 02:17:28 (11200): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 21:48 queuedata.json
2026-03-05 02:17:28 (11200): Guest Log: -rwxr-xr-x. 1 atlas atlas     10504 Mar  5 02:12 init_data.xml
2026-03-05 02:17:28 (11200): Guest Log: -rwxr-xr-x. 1 atlas atlas    597945 Mar  5 02:12 input.tar.gz
2026-03-05 02:17:28 (11200): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 02:12 start_atlas.sh
2026-03-05 02:17:28 (11200): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 02:12 EVNT.48958575._000029.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 02:17:28 (11200): Guest Log: -rw-r--r--. 1 atlas atlas      2536 Mar  5 02:13 pandaJob.out
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas    997757 Mar  5 02:14 agis_schedconf.cvmfs.json
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas       424 Mar  5 02:14 workernode_map.json
2026-03-05 02:17:28 (11200): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 02:14 pilot3
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas 191279869 Mar  5 07:15 HITS.48958577._000718.pool.root.1
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 07:16 pilot_heartbeat.json
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas      1027 Mar  5 07:16 memory_monitor_summary.json
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 07:16 agis_ddmendpoints.agis.ALL.json
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas    449982 Mar  5 07:16 log.48958577._000718.job.log.tgz.1
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas      6358 Mar  5 07:16 heartbeat.json
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas      4873 Mar  5 07:17 pilotlog.txt
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas   2432530 Mar  5 07:17 log.48958577._000718.job.log.1
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 07:17 output.list
2026-03-05 02:17:28 (11200): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 07:17 runtime_log
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas   2897920 Mar  5 07:17 result.tar.gz
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas       646 Mar  5 07:17 U0XKDmXF9H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgtJLDmKtvMGo.diag
2026-03-05 02:17:28 (11200): Guest Log: -rw-r--r--. 1 atlas atlas      8713 Mar  5 07:17 runtime_log.err
2026-03-05 02:17:28 (11200): Guest Log: Looking for outputfile HITS.48958577._000718.pool.root.1
2026-03-05 02:17:28 (11200): Guest Log: HITS file was successfully produced
2026-03-05 02:17:28 (11200): Guest Log: -rw-------. 1 atlas atlas 191279869 Mar  5 07:15 /home/atlas/RunAtlas/HITS.48958577._000718.pool.root.1
2026-03-05 02:17:30 (11200): Guest Log: Successfully finished the ATLAS job!
2026-03-05 02:17:30 (11200): Guest Log: Copying the results back to the shared directory!
2026-03-05 02:17:30 (11200): Guest Log:  *** Contents of shared directory: ***
2026-03-05 02:17:31 (11200): Guest Log: total 450424
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root 266423348 Mar  5 02:12 ATLAS.root_0
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root 191279869 Mar  5 07:17 HITS.pool.root.1
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root     10504 Mar  5 02:12 init_data.xml
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root    597945 Mar  5 01:47 input.tar.gz
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root   2897920 Mar  5 07:17 result.tar.gz
2026-03-05 02:17:31 (11200): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  5 01:47 start_atlas.sh
2026-03-05 02:17:31 (11200): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 02:17:31 (11200): VM Completion File Detected.
2026-03-05 02:17:31 (11200): Powering off VM.
2026-03-05 02:17:32 (11200): Successfully stopped VM.
2026-03-05 02:17:32 (11200): Deregistering VM. (boinc_deccf6d338ff258c, slot#3)
2026-03-05 02:17:32 (11200): Removing network bandwidth throttle group from VM.
2026-03-05 02:17:32 (11200): Removing VM from VirtualBox.
2026-03-05 02:17:37 (11200): called boinc_finish(0)

</stderr_txt>
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