Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:28 (4119956): wrapper (7.7.26015): starting
16:50:28 (4119956): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 16:50:28] Arguments: --nthreads 12
[2026-03-04 16:50:28] Threads: 12
[2026-03-04 16:50:28] Checking for CVMFS
[2026-03-04 16:50:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 16:50:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 16:50:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 16:50:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 16:50:30] 2.11.5.0 2137812 135054 365244 156897 0 253 29327842 45568000 24935 130560 0 992826484 99.803 593211873 23346 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-04 16:50:30] CVMFS is ok
[2026-03-04 16:50:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 16:50:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 16:50:30] Further information can be found at the LHC@home message board.
[2026-03-04 16:50:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 16:50:30] Checking for apptainer binary...
[2026-03-04 16:50:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 16:50:30] Running /usr/bin/apptainer --version
[2026-03-04 16:50:30] apptainer version 1.4.1-1.el9
[2026-03-04 16:50:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 16:50:31] wns0059.triumf.lcg
[2026-03-04 16:50:31] apptainer works
[2026-03-04 16:50:31] Set ATHENA_PROC_NUMBER=12
[2026-03-04 16:50:31] Set ATHENA_CORE_NUMBER=12
[2026-03-04 16:50:31] Starting ATLAS job with PandaID=7040750068
[2026-03-04 16:50:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 16:57:52]  *** The last 200 lines of the pilot log: ***
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | wrong length of table data, x=[1772671994.0, 1772672055.0], y=[1477.0, 469915.0] (must be same and length>=4)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | could have reported an average CPU frequency of 2100 MHz (4 samples)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . Timing measurements:
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . get job = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . initial setup = 41 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload setup = 46 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-in = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload execution = 122 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-out = 2 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . log creation = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040750068/pilotlog.txt
[2026-03-04 16:57:52] 2026-03-05 00:56:46,168 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 16:57:52] - Log from pilotlog.txt -
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7040750068/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | extracted standard info from prmon json
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | wrong length of table data, x=[1772671994.0, 1772672055.0], y=[1477.0, 469915.0] (must be same and length>=4)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | could have reported an average CPU frequency of 2100 MHz (4 samples)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . Timing measurements:
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . get job = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . initial setup = 41 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload setup = 46 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-in = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload execution = 122 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-out = 2 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . log creation = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040750068/pilotlog.txt
[2026-03-04 16:57:52] 2026-03-05 00:56:46,168 | WARNING  | 
[2026-03-04 16:57:52] [begin log extracts]
[2026-03-04 16:57:52] - Log from pilotlog.txt -
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7040750068/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | extracted standard info from prmon json
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 16:57:52] 2026-03-05 00:56:46,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | WARNING  | wrong length of table data, x=[1772671994.0, 1772672055.0], y=[1477.0, 469915.0] (must be same and length>=4)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | could have reported an average CPU frequency of 2100 MHz (4 samples)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,051 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . Timing measurements:
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . get job = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . initial setup = 41 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload setup = 46 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-in = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . payload execution = 122 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . stage-out = 2 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | . log creation = 0 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | ..............................
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 16:57:52] 2026-03-05 00:56:46,052 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040750068/pilotlog.txt
[2026-03-04 16:57:52] [end log extracts]
[2026-03-04 16:57:52] 2026-03-05 00:56:46,168 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,169 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 16:57:52] 2026-03-05 00:56:46,973 | INFO     | 
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | job summary report
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | --------------------------------------------------
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | PanDA job id: 7040750068
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | task id: 48936106
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 16:54:30,566 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | pilot state: failed 
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | transexitcode: 65
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | exeerrorcode: 65
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | exitcode: 65
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | cpuconsumptiontime: 18 s
[2026-03-04 16:57:52] 2026-03-05 00:56:46,974 | INFO     | nevents: 0
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | neventsw: 0
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | pid: 4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | pgrp: 4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | corecount: 12
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | event service: False
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | sizes: {0: 2295268, 1: 2295352, 2: 2295785, 3: 2295813, 173: 2319006, 176: 2323298, 180: 2323482, 298: 2323648}
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | --------------------------------------------------
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | 
[2026-03-04 16:57:52] 2026-03-05 00:56:46,975 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,086 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 16:57:52] 2026-03-05 00:56:47,087 | INFO     | job 7040750068 has completed (purged errors)
[2026-03-04 16:57:52] 2026-03-05 00:56:47,087 | INFO     | overall cleanup function is called
[2026-03-04 16:57:52] 2026-03-05 00:56:48,093 | INFO     | --- collectZombieJob: --- 10, [4128796]
[2026-03-04 16:57:52] 2026-03-05 00:56:48,094 | INFO     | zombie collector waiting for pid 4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:48,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 16:57:52] 2026-03-05 00:56:48,094 | INFO     | collected zombie processes
[2026-03-04 16:57:52] 2026-03-05 00:56:48,094 | INFO     | will attempt to kill all subprocesses of pid=4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:49,219 | INFO     | process IDs to be killed: [4128796] (in reverse order)
[2026-03-04 16:57:52] 2026-03-05 00:56:49,547 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 16:57:52] 2026-03-05 00:56:49,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 16:57:52] 2026-03-05 00:56:49,569 | INFO     | did not find any defunct processes belonging to 4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:49,594 | INFO     | did not find any defunct processes belonging to 4128796
[2026-03-04 16:57:52] 2026-03-05 00:56:49,594 | INFO     | ready for new job
[2026-03-04 16:57:52] 2026-03-05 00:56:49,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 16:57:52] 2026-03-05 00:56:49,595 | INFO     | **************************************
[2026-03-04 16:57:52] 2026-03-05 00:56:49,595 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 16:57:52] 2026-03-05 00:56:49,595 | INFO     | **************************************
[2026-03-04 16:57:52] 2026-03-05 00:56:49,595 | INFO     | 
[2026-03-04 16:57:52] 2026-03-05 00:56:49,606 | INFO     | architecture information:
[2026-03-04 16:57:52] 2026-03-05 00:56:49,606 | INFO     | executing command: cat /etc/os-release
[2026-03-04 16:57:52] 2026-03-05 00:56:49,669 | INFO     | cat /etc/os-release:
[2026-03-04 16:57:52] NAME="CentOS Linux"
[2026-03-04 16:57:52] VERSION="7 (Core)"
[2026-03-04 16:57:52] ID="centos"
[2026-03-04 16:57:52] ID_LIKE="rhel fedora"
[2026-03-04 16:57:52] VERSION_ID="7"
[2026-03-04 16:57:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 16:57:52] ANSI_COLOR="0;31"
[2026-03-04 16:57:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 16:57:52] HOME_URL="https://www.centos.org/"
[2026-03-04 16:57:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 16:57:52] 
[2026-03-04 16:57:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 16:57:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 16:57:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 16:57:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 16:57:52] 
[2026-03-04 16:57:52] 2026-03-05 00:56:49,669 | INFO     | **************************************
[2026-03-04 16:57:52] 2026-03-05 00:56:50,173 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 16:57:52] 2026-03-05 00:56:50,255 | INFO     | sufficient remaining disk space (2150935560192 B)
[2026-03-04 16:57:52] 2026-03-05 00:56:50,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 16:57:52] 2026-03-05 00:56:50,255 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 16:57:52] 2026-03-05 00:56:50,257 | INFO     | update_server=False
[2026-03-04 16:57:52] 2026-03-05 00:56:50,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 16:57:52] 2026-03-05 00:56:50,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 16:57:52] 2026-03-05 00:56:50,258 | INFO     | aborting loop
[2026-03-04 16:57:52] 2026-03-05 00:56:50,745 | INFO     | all payload control threads have been joined
[2026-03-04 16:57:52] 2026-03-05 00:56:50,751 | INFO     | all data control threads have been joined
[2026-03-04 16:57:52] 2026-03-05 00:56:50,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 16:57:52] 2026-03-05 00:56:50,911 | INFO     | all job control threads have been joined
[2026-03-04 16:57:52] 2026-03-05 00:56:51,263 | INFO     | [job] retrieve thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,264 | INFO     | [job] job monitor thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,533 | INFO     | [job] validate thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,536 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,570 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,574 | INFO     | [data] copytool_in thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 16:57:52] 2026-03-05 00:56:51,767 | INFO     | [data] control thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,771 | INFO     | [payload] control thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,784 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,916 | INFO     | [job] control thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:51,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 16:57:52] 2026-03-05 00:56:52,055 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:52,652 | INFO     | [payload] failed_post thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:52,658 | INFO     | [payload] validate_post thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:52,710 | INFO     | [job] queue monitor thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:52,873 | INFO     | [data] copytool_out thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:56:55,984 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 16:57:52] 2026-03-05 00:57:19,774 | INFO     | PID=4123828 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 16:57:52] 2026-03-05 00:57:19,774 | INFO     | .. there are 42 such processes running
[2026-03-04 16:57:52] 2026-03-05 00:57:19,791 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 16:57:52] 2026-03-05 00:57:19,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 16:57:52] 2026-03-05 00:57:19,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 16:57:52] 2026-03-05 00:57:45,082 | INFO     | [monitor] cgroup control has ended
[2026-03-04 16:57:52] 2026-03-05 00:57:45,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252162688832)>', '<ExcThread(monitor, started 140251834058496)>']
[2026-03-04 16:57:52] 2026-03-05 00:57:45,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 16:57:52] 2026-03-05 00:57:45,949 | INFO     | [monitor] control thread has ended
[2026-03-04 16:57:52] 2026-03-05 00:57:50,722 | INFO     | all workflow threads have been joined
[2026-03-04 16:57:52] 2026-03-05 00:57:50,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 16:57:52] 2026-03-05 00:57:50,723 | INFO     | traces error code: 0
[2026-03-04 16:57:52] 2026-03-05 00:57:50,723 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 16:57:52] 2026-03-05 00:57:50,987 [wrapper] ==== pilot stdout END ====
[2026-03-04 16:57:52] 2026-03-05 00:57:51,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 16:57:52] 2026-03-05 00:57:51,074 [wrapper] pilotpid: 4123828
[2026-03-04 16:57:52] 2026-03-05 00:57:51,099 [wrapper] Pilot exit status: 0
[2026-03-04 16:57:52] 2026-03-05 00:57:51,310 [wrapper] pandaids: 7040750068
[2026-03-04 16:57:52] 2026-03-05 00:57:51,801 [wrapper] cleanup supervisor_pilot 4123834 4123829
[2026-03-04 16:57:52] 2026-03-05 00:57:51,811 [wrapper] Test setup, not cleaning
[2026-03-04 16:57:52] 2026-03-05 00:57:51,825 [wrapper] apfmon messages muted
[2026-03-04 16:57:52] 2026-03-05 00:57:51,874 [wrapper] ==== wrapper stdout END ====
[2026-03-04 16:57:52] 2026-03-05 00:57:51,918 [wrapper] ==== wrapper stderr END ====
[2026-03-04 16:57:52]  *** Error codes and diagnostics ***
[2026-03-04 16:57:52]     "exeErrorCode": 65,
[2026-03-04 16:57:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 16:57:52]     "pilotErrorCode": 1305,
[2026-03-04 16:57:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 16:57:52]  *** Listing of results directory ***
[2026-03-04 16:57:52] total 254000
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc    584627 Mar  4 12:50 pilot3.tar.gz
[2026-03-04 16:57:52] -rwx------. 1 boinc boinc     36322 Mar  4 13:46 runpilot2-wrapper.sh
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc      5111 Mar  4 13:46 queuedata.json
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc       100 Mar  4 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 16:57:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 16:50 run_atlas
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc       105 Mar  4 16:50 job.xml
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc      6590 Mar  4 16:50 init_data.xml
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc 255918912 Mar  4 16:50 EVNT.48564654._000004.pool.root.1
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:50 start_atlas.sh
[2026-03-04 16:57:52] drwxrwx--x. 2 boinc boinc      4096 Mar  4 16:50 shared
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc    597941 Mar  4 16:50 input.tar.gz
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc         0 Mar  4 16:50 boinc_lockfile
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc      2531 Mar  4 16:50 pandaJob.out
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc    997749 Mar  4 16:51 agis_schedconf.cvmfs.json
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc   1521291 Mar  4 16:51 agis_ddmendpoints.agis.ALL.json
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc       445 Mar  4 16:51 workernode_map.json
[2026-03-04 16:57:52] drwx------. 5 boinc boinc      4096 Mar  4 16:51 pilot3
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc       524 Mar  4 16:54 boinc_task_state.xml
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc       987 Mar  4 16:54 memory_monitor_summary.json
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc     23103 Mar  4 16:54 log.48936106._000076.job.log.tgz.1
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc      7019 Mar  4 16:56 heartbeat.json
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc        95 Mar  4 16:57 pilot_heartbeat.json
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc      4819 Mar  4 16:57 pilotlog.txt
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc      8192 Mar  4 16:57 boinc_mmap_file
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc        23 Mar  4 16:57 wrapper_checkpoint.txt
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc     96839 Mar  4 16:57 log.48936106._000076.job.log.1
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc       188 Mar  4 16:57 output.list
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc       620 Mar  4 16:57 runtime_log
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc    143360 Mar  4 16:57 result.tar.gz
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc      8635 Mar  4 16:57 runtime_log.err
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc       646 Mar  4 16:57 K3PMDm3D9H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9uLLDmeYVKQm.diag
[2026-03-04 16:57:52] -rw-r--r--. 1 boinc boinc     21870 Mar  4 16:57 stderr.txt
[2026-03-04 16:57:52] No HITS result produced
[2026-03-04 16:57:52]  *** Contents of shared directory: ***
[2026-03-04 16:57:52] total 250668
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc 255918912 Mar  4 16:50 ATLAS.root_0
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc     15845 Mar  4 16:50 start_atlas.sh
[2026-03-04 16:57:52] -rw-r--r--. 2 boinc boinc    597941 Mar  4 16:50 input.tar.gz
[2026-03-04 16:57:52] -rw-------. 1 boinc boinc    143360 Mar  4 16:57 result.tar.gz
16:57:54 (4119956): run_atlas exited; CPU time 30.922675
16:57:54 (4119956): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN