Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:44:41 (4835): wrapper (7.7.26015): starting
16:44:41 (4835): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 16:44:41] Arguments: --nthreads 8
[2026-03-04 16:44:41] Threads: 8
[2026-03-04 16:44:41] Checking for CVMFS
[2026-03-04 16:44:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 16:44:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 16:44:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 16:44:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 16:44:42] 2.11.2.0 2804 181766 72512 156891 3 51 20165549 20275201 1 130560 0 42499438 99.816 12858727 30752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 16:44:42] CVMFS is ok
[2026-03-04 16:44:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 16:44:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 16:44:42] Further information can be found at the LHC@home message board.
[2026-03-04 16:44:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 16:44:42] Checking for apptainer binary...
[2026-03-04 16:44:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 16:44:42] Running /usr/bin/apptainer --version
[2026-03-04 16:44:42] apptainer version 1.3.2-1.el7
[2026-03-04 16:44:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 16:44:43] c-204-3.aglt2.org
[2026-03-04 16:44:43] apptainer works
[2026-03-04 16:44:43] Set ATHENA_PROC_NUMBER=8
[2026-03-04 16:44:43] Set ATHENA_CORE_NUMBER=8
[2026-03-04 16:44:43] Starting ATLAS job with PandaID=7040404637
[2026-03-04 16:44:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:28:40 (31735): wrapper (7.7.26015): starting
17:28:40 (31735): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 17:28:41] Arguments: --nthreads 8
[2026-03-04 17:28:41] Threads: 8
[2026-03-04 17:28:41] This job has been restarted, cleaning up previous attempt
[2026-03-04 17:28:41] Checking for CVMFS
[2026-03-04 17:28:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 17:28:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 17:28:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 17:28:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 17:28:41] 2.11.2.0 2804 181810 72516 156893 3 11 20237949 20275201 1 130560 0 42550087 99.816 12863741 30752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 17:28:41] CVMFS is ok
[2026-03-04 17:28:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 17:28:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 17:28:41] Further information can be found at the LHC@home message board.
[2026-03-04 17:28:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 17:28:41] Checking for apptainer binary...
[2026-03-04 17:28:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 17:28:41] Running /usr/bin/apptainer --version
[2026-03-04 17:28:41] apptainer version 1.3.2-1.el7
[2026-03-04 17:28:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 17:28:43] c-204-3.aglt2.org
[2026-03-04 17:28:43] apptainer works
[2026-03-04 17:28:43] Set ATHENA_PROC_NUMBER=8
[2026-03-04 17:28:43] Set ATHENA_CORE_NUMBER=8
[2026-03-04 17:28:43] Starting ATLAS job with PandaID=7040404637
[2026-03-04 17:28:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 19:46:21]  *** The last 200 lines of the pilot log: ***
[2026-03-04 19:46:21] 2026-03-05 00:45:21,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 19:46:21] 2026-03-05 00:45:22,628 | INFO     | time since job start (8181s) is within the limit (349056.0s)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,485 | INFO     | job 7040404637 has state=finished
[2026-03-04 19:46:21] 2026-03-05 00:45:23,485 | INFO     | preparing for final server update for job 7040404637 in state='finished'
[2026-03-04 19:46:21] 2026-03-05 00:45:23,486 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7040404637/jobReport.json
[2026-03-04 19:46:21] 2026-03-05 00:45:23,489 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-04 19:46:21] 2026-03-05 00:45:23,490 | INFO     | this job has now completed (state=finished)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,490 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,490 | INFO     | log transfer has been attempted: DONE
[2026-03-04 19:46:21] 2026-03-05 00:45:23,490 | INFO     | job 7040404637 has finished - writing final server update
[2026-03-04 19:46:21] 2026-03-05 00:45:23,491 | INFO     | total number of processed events: 400 (read)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,493 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7040404637/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,494 | INFO     | extracted standard info from prmon json
[2026-03-04 19:46:21] 2026-03-05 00:45:23,494 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 19:46:21] 2026-03-05 00:45:23,494 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 19:46:21] 2026-03-05 00:45:23,495 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 19:46:21] 2026-03-05 00:45:23,495 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 19:46:21] 2026-03-05 00:45:23,497 | INFO     | fitting pss+swap vs Time
[2026-03-04 19:46:21] 2026-03-05 00:45:23,497 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 19:46:21] 2026-03-05 00:45:23,498 | INFO     | sum of deviations: -2390944257.4999995
[2026-03-04 19:46:21] 2026-03-05 00:45:23,498 | INFO     | mean x: 1772667424.5
[2026-03-04 19:46:21] 2026-03-05 00:45:23,498 | INFO     | mean y: 2551447.574626866
[2026-03-04 19:46:21] 2026-03-05 00:45:23,498 | INFO     | intersect: 5683594535.861592
[2026-03-04 19:46:21] 2026-03-05 00:45:23,499 | INFO     | chi2: 1.6593198252986368
[2026-03-04 19:46:21] 2026-03-05 00:45:23,499 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | sum of deviations: -1948238557.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | mean x: 1772667272.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | mean y: 2552291.3333333335
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | intersect: 5191124969.601635
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | chi2: 1.6600619260612557
[2026-03-04 19:46:21] 2026-03-05 00:45:23,500 | INFO     | current chi2=1.6600619260612557 (change=-0.044723190267757805 %)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,501 | INFO     | right removable region: 128
[2026-03-04 19:46:21] 2026-03-05 00:45:23,501 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,501 | INFO     | sum of deviations: -23076440788.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | mean x: 1772667577.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | mean y: 2589998.88372093
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | intersect: 61460059031.68781
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | chi2: 0.14560421517775182
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | current chi2=0.14560421517775182 (change=91.22506626162038 %)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,502 | INFO     | sum of square deviations: 591173875.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,503 | INFO     | sum of deviations: -22697969948.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,503 | INFO     | mean x: 1772667729.5
[2026-03-04 19:46:21] 2026-03-05 00:45:23,503 | INFO     | mean y: 2589102.9032258065
[2026-03-04 19:46:21] 2026-03-05 00:45:23,503 | INFO     | intersect: 68063713847.26104
[2026-03-04 19:46:21] 2026-03-05 00:45:23,504 | INFO     | chi2: 0.12019813685436986
[2026-03-04 19:46:21] 2026-03-05 00:45:23,504 | INFO     | current chi2=0.12019813685436986 (change=17.44872447021299 %)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,504 | INFO     | left removable region: 20
[2026-03-04 19:46:21] 2026-03-05 00:45:23,504 | INFO     | sum of square deviations: 390582207.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | sum of deviations: -14520224182.0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | mean x: 1772667851.5
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | mean y: 2574558.314814815
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | intersect: 65903002541.7234
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | chi2: 0.10766385755780038
[2026-03-04 19:46:21] 2026-03-05 00:45:23,505 | INFO     | current memory leak: -37.18 B/s (using 108 data points, chi2=0.11)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | could have reported an average CPU frequency of 1695 MHz (8 samples)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | ..............................
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | . Timing measurements:
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | . get job = 0 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | . initial setup = 1 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,506 | INFO     | . payload setup = 8 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,507 | INFO     | . stage-in = 0 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,507 | INFO     | . payload execution = 8151 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,507 | INFO     | . stage-out = 2 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,507 | INFO     | . log creation = 0 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,507 | INFO     | ..............................
[2026-03-04 19:46:21] 2026-03-05 00:45:23,591 | INFO     | 
[2026-03-04 19:46:21] 2026-03-05 00:45:23,591 | INFO     | job summary report
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | --------------------------------------------------
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | PanDA job id: 7040404637
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | task id: 48973452
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | errors: (none)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 19:46:21] 2026-03-05 00:45:23,592 | INFO     | pilot state: finished 
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | transexitcode: 0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | exeerrorcode: 0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | exeerrordiag: 
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | exitcode: 0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | exitmsg: OK
[2026-03-04 19:46:21] 2026-03-05 00:45:23,593 | INFO     | cpuconsumptiontime: 60818 s
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | nevents: 400
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | neventsw: 0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | pid: 6633
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | pgrp: 6633
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | corecount: 8
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | event service: False
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | sizes: {0: 2295640, 1: 2295874, 11: 2295874, 8164: 2323654, 8167: 2332652, 8169: 2332708, 8171: 2333030}
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | --------------------------------------------------
[2026-03-04 19:46:21] 2026-03-05 00:45:23,594 | INFO     | 
[2026-03-04 19:46:21] 2026-03-05 00:45:23,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 19:46:21] 2026-03-05 00:45:23,623 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,627 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,627 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,627 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,627 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 19:46:21] 2026-03-05 00:45:23,628 | INFO     | job 7040404637 has completed (purged errors)
[2026-03-04 19:46:21] 2026-03-05 00:45:23,628 | INFO     | overall cleanup function is called
[2026-03-04 19:46:21] 2026-03-05 00:45:24,637 | INFO     | --- collectZombieJob: --- 10, [6633]
[2026-03-04 19:46:21] 2026-03-05 00:45:24,637 | INFO     | zombie collector waiting for pid 6633
[2026-03-04 19:46:21] 2026-03-05 00:45:24,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 19:46:21] 2026-03-05 00:45:24,638 | INFO     | collected zombie processes
[2026-03-04 19:46:21] 2026-03-05 00:45:24,638 | INFO     | will attempt to kill all subprocesses of pid=6633
[2026-03-04 19:46:21] 2026-03-05 00:45:24,725 | INFO     | process IDs to be killed: [6633] (in reverse order)
[2026-03-04 19:46:21] 2026-03-05 00:45:24,783 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 19:46:21] 2026-03-05 00:45:24,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 19:46:21] 2026-03-05 00:45:24,786 | INFO     | did not find any defunct processes belonging to 6633
[2026-03-04 19:46:21] 2026-03-05 00:45:24,789 | INFO     | did not find any defunct processes belonging to 6633
[2026-03-04 19:46:21] 2026-03-05 00:45:24,789 | INFO     | ready for new job
[2026-03-04 19:46:21] 2026-03-05 00:45:24,789 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 19:46:21] 2026-03-05 00:45:24,791 | INFO     | **************************************
[2026-03-04 19:46:21] 2026-03-05 00:45:24,791 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 19:46:21] 2026-03-05 00:45:24,791 | INFO     | **************************************
[2026-03-04 19:46:21] 2026-03-05 00:45:24,791 | INFO     | 
[2026-03-04 19:46:21] 2026-03-05 00:45:24,792 | INFO     | architecture information:
[2026-03-04 19:46:21] 2026-03-05 00:45:24,792 | INFO     | executing command: cat /etc/os-release
[2026-03-04 19:46:21] 2026-03-05 00:45:24,810 | INFO     | cat /etc/os-release:
[2026-03-04 19:46:21] NAME="CentOS Linux"
[2026-03-04 19:46:21] VERSION="7 (Core)"
[2026-03-04 19:46:21] ID="centos"
[2026-03-04 19:46:21] ID_LIKE="rhel fedora"
[2026-03-04 19:46:21] VERSION_ID="7"
[2026-03-04 19:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 19:46:21] ANSI_COLOR="0;31"
[2026-03-04 19:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 19:46:21] HOME_URL="https://www.centos.org/"
[2026-03-04 19:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 19:46:21] 
[2026-03-04 19:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 19:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 19:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 19:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 19:46:21] 
[2026-03-04 19:46:21] 2026-03-05 00:45:24,811 | INFO     | **************************************
[2026-03-04 19:46:21] 2026-03-05 00:45:25,313 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 19:46:21] 2026-03-05 00:45:25,332 | INFO     | sufficient remaining disk space (18390974464 B)
[2026-03-04 19:46:21] 2026-03-05 00:45:25,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 19:46:21] 2026-03-05 00:45:25,332 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 19:46:21] 2026-03-05 00:45:25,333 | INFO     | update_server=False
[2026-03-04 19:46:21] 2026-03-05 00:45:25,333 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 19:46:21] 2026-03-05 00:45:25,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:46:21] 2026-03-05 00:45:25,334 | INFO     | aborting loop
[2026-03-04 19:46:21] 2026-03-05 00:45:25,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:46:21] 2026-03-05 00:45:25,587 | INFO     | all payload control threads have been joined
[2026-03-04 19:46:21] 2026-03-05 00:45:25,871 | INFO     | all data control threads have been joined
[2026-03-04 19:46:21] 2026-03-05 00:45:25,871 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 19:46:21] 2026-03-05 00:45:26,339 | INFO     | [job] retrieve thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,339 | INFO     | [job] job monitor thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,340 | INFO     | [job] queue monitor thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,348 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,592 | INFO     | [payload] control thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,652 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:26,784 | INFO     | all job control threads have been joined
[2026-03-04 19:46:21] 2026-03-05 00:45:26,876 | INFO     | [data] control thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,258 | INFO     | [job] validate thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,358 | INFO     | [payload] validate_post thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,442 | INFO     | [payload] failed_post thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 19:46:21] 2026-03-05 00:45:27,664 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,748 | INFO     | [data] copytool_in thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,790 | INFO     | [job] control thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:27,880 | INFO     | [data] copytool_out thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:31,497 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:36,190 | INFO     | job.realtimelogging is not enabled
[2026-03-04 19:46:21] 2026-03-05 00:45:37,194 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 19:46:21] 2026-03-05 00:45:55,847 | INFO     | PID=3437 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-04 19:46:21] 2026-03-05 00:45:55,847 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 19:46:21] 2026-03-05 00:45:55,848 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 19:46:21] 2026-03-05 00:45:55,848 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 19:46:21] 2026-03-05 00:46:14,662 | INFO     | [monitor] cgroup control has ended
[2026-03-04 19:46:21] 2026-03-05 00:46:16,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196926437184)>', '<ExcThread(monitor, started 140196490229504)>']
[2026-03-04 19:46:21] 2026-03-05 00:46:16,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 19:46:21] 2026-03-05 00:46:16,953 | INFO     | [monitor] control thread has ended
[2026-03-04 19:46:21] 2026-03-05 00:46:21,430 | INFO     | all workflow threads have been joined
[2026-03-04 19:46:21] 2026-03-05 00:46:21,435 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 19:46:21] 2026-03-05 00:46:21,435 | INFO     | traces error code: 0
[2026-03-04 19:46:21] 2026-03-05 00:46:21,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 19:46:21] 2026-03-05 00:46:21,550 [wrapper] ==== pilot stdout END ====
[2026-03-04 19:46:21] 2026-03-05 00:46:21,555 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 19:46:21] 2026-03-05 00:46:21,560 [wrapper] pilotpid: 3437
[2026-03-04 19:46:21] 2026-03-05 00:46:21,565 [wrapper] Pilot exit status: 0
[2026-03-04 19:46:21] 2026-03-05 00:46:21,586 [wrapper] pandaids: 7040404637 7040404637
[2026-03-04 19:46:21] 2026-03-05 00:46:21,641 [wrapper] cleanup supervisor_pilot 22581 3438
[2026-03-04 19:46:21] 2026-03-05 00:46:21,646 [wrapper] Test setup, not cleaning
[2026-03-04 19:46:21] 2026-03-05 00:46:21,651 [wrapper] apfmon messages muted
[2026-03-04 19:46:21] 2026-03-05 00:46:21,656 [wrapper] ==== wrapper stdout END ====
[2026-03-04 19:46:21] 2026-03-05 00:46:21,660 [wrapper] ==== wrapper stderr END ====
[2026-03-04 19:46:21]  *** Error codes and diagnostics ***
[2026-03-04 19:46:21]     "exeErrorCode": 0,
[2026-03-04 19:46:21]     "exeErrorDiag": "",
[2026-03-04 19:46:21]     "pilotErrorCode": 0,
[2026-03-04 19:46:21]     "pilotErrorDiag": "",
[2026-03-04 19:46:21]  *** Listing of results directory ***
[2026-03-04 19:46:21] total 791532
[2026-03-04 19:46:21] drwx------ 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-03-04 19:46:21] -rwx------ 1 boincer umatlas     36322 Mar  4 13:35 runpilot2-wrapper.sh
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 13:35 pilot3.tar.gz
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 13:35 queuedata.json
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas       100 Mar  4 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 19:46:21] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 16:44 run_atlas
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas       105 Mar  4 16:44 job.xml
[2026-03-04 19:46:21] -rw-r--r-- 3 boincer umatlas 295948282 Mar  4 16:44 EVNT.48717224._000055.pool.root.1
[2026-03-04 19:46:21] -rw-r--r-- 3 boincer umatlas 295948282 Mar  4 16:44 ATLAS.root_0
[2026-03-04 19:46:21] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 16:44 start_atlas.sh
[2026-03-04 19:46:21] drwxrwx--x 2 boincer umatlas      4096 Mar  4 16:44 shared
[2026-03-04 19:46:21] -rw-r--r-- 2 boincer umatlas    597950 Mar  4 16:44 input.tar.gz
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas         0 Mar  4 16:44 boinc_lockfile
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas      2595 Mar  4 17:28 pandaJob.out
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas        57 Mar  4 17:28 setup.sh.local
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas    997757 Mar  4 17:29 agis_schedconf.cvmfs.json
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas       432 Mar  4 17:29 workernode_map.json
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas      5909 Mar  4 19:38 init_data.xml
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas 211643276 Mar  4 19:44 HITS.48973452._001364.pool.root.1
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas       531 Mar  4 19:44 boinc_task_state.xml
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas        96 Mar  4 19:44 pilot_heartbeat.json
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas      1061 Mar  4 19:45 memory_monitor_summary.json
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas   1521291 Mar  4 19:45 agis_ddmendpoints.agis.ALL.json
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas    376692 Mar  4 19:45 log.48973452._001364.job.log.tgz.1
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas      6398 Mar  4 19:45 heartbeat.json
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas      4813 Mar  4 19:46 pilotlog.txt
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas   1148950 Mar  4 19:46 log.48973452._001364.job.log.1
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas       357 Mar  4 19:46 output.list
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas       620 Mar  4 19:46 runtime_log
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas   1546240 Mar  4 19:46 result.tar.gz
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas      9421 Mar  4 19:46 runtime_log.err
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas       784 Mar  4 19:46 MkKKDmvE6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9KJLDmNKzuin.diag
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas      8192 Mar  4 19:46 boinc_mmap_file
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas        28 Mar  4 19:46 wrapper_checkpoint.txt
[2026-03-04 19:46:21] -rw-r--r-- 1 boincer umatlas     23371 Mar  4 19:46 stderr.txt
[2026-03-04 19:46:21] HITS file was successfully produced:
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas 211643276 Mar  4 19:44 shared/HITS.pool.root.1
[2026-03-04 19:46:21]  *** Contents of shared directory: ***
[2026-03-04 19:46:21] total 497812
[2026-03-04 19:46:21] -rw-r--r-- 3 boincer umatlas 295948282 Mar  4 16:44 ATLAS.root_0
[2026-03-04 19:46:21] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 16:44 start_atlas.sh
[2026-03-04 19:46:21] -rw-r--r-- 2 boincer umatlas    597950 Mar  4 16:44 input.tar.gz
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas 211643276 Mar  4 19:44 HITS.pool.root.1
[2026-03-04 19:46:21] -rw------- 1 boincer umatlas   1546240 Mar  4 19:46 result.tar.gz
19:46:23 (31735): run_atlas exited; CPU time 60768.058370
19:46:23 (31735): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN