Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:37:56 (1249986): wrapper (7.7.26015): starting
09:37:56 (1249986): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 09:37:56] Arguments: --nthreads 4
[2026-03-07 09:37:56] Threads: 4
[2026-03-07 09:37:56] Checking for CVMFS
[2026-03-07 09:37:56] No cvmfs_config command found, will try listing directly
[2026-03-07 09:37:56] CVMFS is ok
[2026-03-07 09:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 09:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 09:37:56] Further information can be found at the LHC@home message board.
[2026-03-07 09:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 09:37:56] Checking for apptainer binary...
[2026-03-07 09:37:56] which: no apptainer in ((null))
[2026-03-07 09:37:56] apptainer is not installed, using version from CVMFS
[2026-03-07 09:37:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 09:37:56] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-07 09:37:56] apptainer works
[2026-03-07 09:37:56] Set ATHENA_PROC_NUMBER=4
[2026-03-07 09:37:56] Set ATHENA_CORE_NUMBER=4
[2026-03-07 09:37:56] Starting ATLAS job with PandaID=7040372292
[2026-03-07 09:37:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 11:10:23]  *** The last 200 lines of the pilot log: ***
[2026-03-07 11:10:23]  is_tar=False
[2026-03-07 11:10:23]  lfn=log.48973452._000290.job.log.tgz.1
[2026-03-07 11:10:23]  mtime=0
[2026-03-07 11:10:23]  protocol_id=None
[2026-03-07 11:10:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 11:10:23]  replicas=None
[2026-03-07 11:10:23]  scope=mc23_13p6TeV
[2026-03-07 11:10:23]  status=None
[2026-03-07 11:10:23]  status_code=0
[2026-03-07 11:10:23]  storage_token=
[2026-03-07 11:10:23]  surl=/var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/log.48973452._000290.job.log.tgz.1
[2026-03-07 11:10:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/b9/log.48973452._000290.job.log.tgz.1
[2026-03-07 11:10:23]  workdir=None
[2026-03-07 11:10:23] ]
[2026-03-07 11:10:23] 2026-03-07 10:09:34,626 | INFO     | transferring file log.48973452._000290.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/log.48973452._000290.job.log.tgz.1 to /var/lib/b
[2026-03-07 11:10:23] 2026-03-07 10:09:34,627 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/log.48973452._000290.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/5/lo
[2026-03-07 11:10:23] 2026-03-07 10:09:34,642 | INFO     | adding to output.list: log.48973452._000290.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/b9/log.48973452._000290.job.log.tg
[2026-03-07 11:10:23] 2026-03-07 10:09:34,643 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 11:10:23] 2026-03-07 10:09:34,643 | INFO     | summary of transferred files:
[2026-03-07 11:10:23] 2026-03-07 10:09:34,643 | INFO     |  -- lfn=log.48973452._000290.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 11:10:23] 2026-03-07 10:09:34,643 | INFO     | stage-out finished correctly
[2026-03-07 11:10:23] 2026-03-07 10:09:34,689 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 11:10:23] 2026-03-07 10:09:34,974 | INFO     | time since job start (5486s) is within the limit (349056.0s)
[2026-03-07 11:10:23] 2026-03-07 10:09:35,074 | WARNING  | process 1260335 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 11:10:23] 2026-03-07 10:09:35,074 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:10:23] 2026-03-07 10:09:35,509 | INFO     | number of running child processes to parent process 1260335: 1
[2026-03-07 11:10:23] 2026-03-07 10:09:35,510 | INFO     | maximum number of monitored processes: 6
[2026-03-07 11:10:23] 2026-03-07 10:09:36,979 | INFO     | time since job start (5488s) is within the limit (349056.0s)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,553 | INFO     | job 7040372292 has state=finished
[2026-03-07 11:10:23] 2026-03-07 10:09:37,553 | INFO     | preparing for final server update for job 7040372292 in state='finished'
[2026-03-07 11:10:23] 2026-03-07 10:09:37,554 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/jobReport.json
[2026-03-07 11:10:23] 2026-03-07 10:09:37,555 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/5/workernode_map.json
[2026-03-07 11:10:23] 2026-03-07 10:09:37,555 | INFO     | this job has now completed (state=finished)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,555 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,556 | INFO     | log transfer has been attempted: DONE
[2026-03-07 11:10:23] 2026-03-07 10:09:37,556 | INFO     | job 7040372292 has finished - writing final server update
[2026-03-07 11:10:23] 2026-03-07 10:09:37,556 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3392580/.job.ad'
[2026-03-07 11:10:23] 2026-03-07 10:09:37,556 | INFO     | total number of processed events: 400 (read)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040372292/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | INFO     | extracted standard info from prmon json
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 11:10:23] 2026-03-07 10:09:37,574 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | fitting pss+swap vs Time
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | sum of square deviations: 177275882.0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | sum of deviations: 357859611.0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | mean x: 1772875515.0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | mean y: 2340301.5542168673
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | intersect: -3576491375.8948603
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | chi2: 0.00022268909409015302
[2026-03-07 11:10:23] 2026-03-07 10:09:37,576 | INFO     | current memory leak: 2.02 B/s (using 83 data points, chi2=0.00)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | could have reported an average CPU frequency of 3590 MHz (7 samples)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | ..............................
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . Timing measurements:
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . get job = 0 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . initial setup = 4 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . payload setup = 5 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . stage-in = 0 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . payload execution = 5465 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . stage-out = 0 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | . log creation = 0 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,577 | INFO     | ..............................
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | 
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | job summary report
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | --------------------------------------------------
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | PanDA job id: 7040372292
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | task id: 48973452
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | errors: (none)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | pilot state: finished 
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | transexitcode: 0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | exeerrorcode: 0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | exeerrordiag: 
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | exitcode: 0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | exitmsg: OK
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | cpuconsumptiontime: 21076 s
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | nevents: 400
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | neventsw: 0
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | pid: 1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | pgrp: 1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | corecount: 4
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | event service: False
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | sizes: {0: 2295853, 10: 2295853, 5473: 2322479, 5474: 2331555, 5477: 2331693}
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | --------------------------------------------------
[2026-03-07 11:10:23] 2026-03-07 10:09:37,945 | INFO     | 
[2026-03-07 11:10:23] 2026-03-07 10:09:37,946 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/5
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,961 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | job 7040372292 has completed (purged errors)
[2026-03-07 11:10:23] 2026-03-07 10:09:37,962 | INFO     | overall cleanup function is called
[2026-03-07 11:10:23] 2026-03-07 10:09:38,969 | INFO     | --- collectZombieJob: --- 10, [1260335]
[2026-03-07 11:10:23] 2026-03-07 10:09:38,969 | INFO     | zombie collector waiting for pid 1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:38,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 11:10:23] 2026-03-07 10:09:38,969 | INFO     | collected zombie processes
[2026-03-07 11:10:23] 2026-03-07 10:09:38,969 | INFO     | will attempt to kill all subprocesses of pid=1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:39,380 | INFO     | process IDs to be killed: [1260335] (in reverse order)
[2026-03-07 11:10:23] 2026-03-07 10:09:39,592 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 11:10:23] 2026-03-07 10:09:39,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 11:10:23] 2026-03-07 10:09:39,618 | INFO     | did not find any defunct processes belonging to 1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:39,644 | INFO     | did not find any defunct processes belonging to 1260335
[2026-03-07 11:10:23] 2026-03-07 10:09:39,645 | INFO     | ready for new job
[2026-03-07 11:10:23] 2026-03-07 10:09:39,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 11:10:23] 2026-03-07 10:09:39,646 | INFO     | **************************************
[2026-03-07 11:10:23] 2026-03-07 10:09:39,646 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 11:10:23] 2026-03-07 10:09:39,646 | INFO     | **************************************
[2026-03-07 11:10:23] 2026-03-07 10:09:39,646 | INFO     | 
[2026-03-07 11:10:23] 2026-03-07 10:09:39,651 | INFO     | architecture information:
[2026-03-07 11:10:23] 2026-03-07 10:09:39,651 | INFO     | executing command: cat /etc/os-release
[2026-03-07 11:10:23] 2026-03-07 10:09:39,662 | INFO     | cat /etc/os-release:
[2026-03-07 11:10:23] NAME="CentOS Linux"
[2026-03-07 11:10:23] VERSION="7 (Core)"
[2026-03-07 11:10:23] ID="centos"
[2026-03-07 11:10:23] ID_LIKE="rhel fedora"
[2026-03-07 11:10:23] VERSION_ID="7"
[2026-03-07 11:10:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 11:10:23] ANSI_COLOR="0;31"
[2026-03-07 11:10:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 11:10:23] HOME_URL="https://www.centos.org/"
[2026-03-07 11:10:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 11:10:23] 
[2026-03-07 11:10:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 11:10:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 11:10:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 11:10:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 11:10:23] 
[2026-03-07 11:10:23] 2026-03-07 10:09:39,665 | INFO     | **************************************
[2026-03-07 11:10:23] 2026-03-07 10:09:40,169 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/5
[2026-03-07 11:10:23] 2026-03-07 10:09:40,184 | INFO     | sufficient remaining disk space (21488467968 B)
[2026-03-07 11:10:23] 2026-03-07 10:09:40,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 11:10:23] 2026-03-07 10:09:40,184 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 11:10:23] 2026-03-07 10:09:40,185 | INFO     | update_server=False
[2026-03-07 11:10:23] 2026-03-07 10:09:40,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 11:10:23] 2026-03-07 10:09:40,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 11:10:23] 2026-03-07 10:09:40,520 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 11:10:23] 2026-03-07 10:09:40,520 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 11:10:23] 2026-03-07 10:09:40,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:10:23] 2026-03-07 10:09:40,520 | INFO     | will abort loop
[2026-03-07 11:10:23] 2026-03-07 10:09:40,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 11:10:23] 2026-03-07 10:09:41,077 | INFO     | all payload control threads have been joined
[2026-03-07 11:10:23] 2026-03-07 10:09:41,115 | INFO     | all data control threads have been joined
[2026-03-07 11:10:23] 2026-03-07 10:09:41,190 | INFO     | [job] retrieve thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:41,235 | INFO     | [payload] validate_post thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:41,304 | INFO     | [payload] failed_post thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:41,525 | INFO     | [job] job monitor thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:41,852 | INFO     | all job control threads have been joined
[2026-03-07 11:10:23] 2026-03-07 10:09:41,870 | INFO     | [job] validate thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,035 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,082 | INFO     | [payload] control thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,120 | INFO     | [data] control thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,135 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,202 | INFO     | [data] copytool_out thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,241 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,427 | INFO     | [data] copytool_in thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,494 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:42,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:10:23] 2026-03-07 10:09:42,857 | INFO     | [job] control thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:43,643 | INFO     | [job] queue monitor thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:09:44,746 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 11:10:23] 2026-03-07 10:10:10,571 | INFO     | PID=1254572 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 11:10:23] 2026-03-07 10:10:10,571 | INFO     | .. there are 53 such processes running
[2026-03-07 11:10:23] 2026-03-07 10:10:10,571 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 11:10:23] 2026-03-07 10:10:10,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 11:10:23] 2026-03-07 10:10:10,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 11:10:23] 2026-03-07 10:10:17,458 | INFO     | [monitor] cgroup control has ended
[2026-03-07 11:10:23] 2026-03-07 10:10:17,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22546314745664)>', '<ExcThread(monitor, started 22546075625216)>']
[2026-03-07 11:10:23] 2026-03-07 10:10:18,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 11:10:23] 2026-03-07 10:10:18,607 | INFO     | [monitor] control thread has ended
[2026-03-07 11:10:23] 2026-03-07 10:10:22,998 | INFO     | all workflow threads have been joined
[2026-03-07 11:10:23] 2026-03-07 10:10:22,998 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 11:10:23] 2026-03-07 10:10:22,998 | INFO     | traces error code: 0
[2026-03-07 11:10:23] 2026-03-07 10:10:22,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 11:10:23] 2026-03-07 10:10:23,164 [wrapper] ==== pilot stdout END ====
[2026-03-07 11:10:23] 2026-03-07 10:10:23,167 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 11:10:23] 2026-03-07 10:10:23,169 [wrapper] pilotpid: 1254572
[2026-03-07 11:10:23] 2026-03-07 10:10:23,171 [wrapper] Pilot exit status: 0
[2026-03-07 11:10:23] 2026-03-07 10:10:23,182 [wrapper] pandaids: 7040372292
[2026-03-07 11:10:23] 2026-03-07 10:10:23,301 [wrapper] cleanup supervisor_pilot 2079521 1254573
[2026-03-07 11:10:23] 2026-03-07 10:10:23,304 [wrapper] Test setup, not cleaning
[2026-03-07 11:10:23] 2026-03-07 10:10:23,306 [wrapper] apfmon messages muted
[2026-03-07 11:10:23] 2026-03-07 10:10:23,307 [wrapper] ==== wrapper stdout END ====
[2026-03-07 11:10:23] 2026-03-07 10:10:23,308 [wrapper] ==== wrapper stderr END ====
[2026-03-07 11:10:23]  *** Error codes and diagnostics ***
[2026-03-07 11:10:23]     "exeErrorCode": 0,
[2026-03-07 11:10:23]     "exeErrorDiag": "",
[2026-03-07 11:10:23]     "pilotErrorCode": 0,
[2026-03-07 11:10:23]     "pilotErrorDiag": "",
[2026-03-07 11:10:23]  *** Listing of results directory ***
[2026-03-07 11:10:23] total 497856
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc    584627 Mar  4 18:22 pilot3.tar.gz
[2026-03-07 11:10:23] -rwx------. 1 boinc boinc     36322 Mar  4 18:25 runpilot2-wrapper.sh
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc      5111 Mar  4 18:26 queuedata.json
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc       100 Mar  7 09:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 11:10:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 09:37 run_atlas
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc       105 Mar  7 09:37 job.xml
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc      6705 Mar  7 09:37 init_data.xml
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc 292839469 Mar  7 09:37 EVNT.48717224._000012.pool.root.1
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc     15845 Mar  7 09:37 start_atlas.sh
[2026-03-07 11:10:23] drwxrwx--x. 2 boinc boinc      4096 Mar  7 09:37 shared
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc    597959 Mar  7 09:37 input.tar.gz
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc         0 Mar  7 09:37 boinc_lockfile
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc      2593 Mar  7 09:37 pandaJob.out
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc    999161 Mar  7 09:38 agis_schedconf.cvmfs.json
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc   1521291 Mar  7 09:38 agis_ddmendpoints.agis.ALL.json
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc       444 Mar  7 09:38 workernode_map.json
[2026-03-07 11:10:23] drwx------. 5 boinc boinc      4096 Mar  7 09:38 pilot3
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc 210862849 Mar  7 11:09 HITS.48973452._000290.pool.root.1
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc        95 Mar  7 11:09 pilot_heartbeat.json
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc      1031 Mar  7 11:09 memory_monitor_summary.json
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc       529 Mar  7 11:09 boinc_task_state.xml
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc    280202 Mar  7 11:09 log.48973452._000290.job.log.tgz.1
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc      6343 Mar  7 11:09 heartbeat.json
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc      8192 Mar  7 11:10 boinc_mmap_file
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc        27 Mar  7 11:10 wrapper_checkpoint.txt
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc      5015 Mar  7 11:10 pilotlog.txt
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc    799518 Mar  7 11:10 log.48973452._000290.job.log.1
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc       357 Mar  7 11:10 output.list
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc       620 Mar  7 11:10 runtime_log
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc   1095680 Mar  7 11:10 result.tar.gz
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc      9204 Mar  7 11:10 runtime_log.err
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc       662 Mar  7 11:10 HWnKDmi94H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvDLLDmItHFsn.diag
[2026-03-07 11:10:23] -rw-r--r--. 1 boinc boinc     21440 Mar  7 11:10 stderr.txt
[2026-03-07 11:10:23] HITS file was successfully produced:
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc 210862849 Mar  7 11:09 shared/HITS.pool.root.1
[2026-03-07 11:10:23]  *** Contents of shared directory: ***
[2026-03-07 11:10:23] total 493584
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc 292839469 Mar  7 09:37 ATLAS.root_0
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc     15845 Mar  7 09:37 start_atlas.sh
[2026-03-07 11:10:23] -rw-r--r--. 2 boinc boinc    597959 Mar  7 09:37 input.tar.gz
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc 210862849 Mar  7 11:09 HITS.pool.root.1
[2026-03-07 11:10:23] -rw-------. 1 boinc boinc   1095680 Mar  7 11:10 result.tar.gz
11:10:25 (1249986): run_atlas exited; CPU time 21311.201955
11:10:25 (1249986): called boinc_finish(0)

</stderr_txt>
]]>

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