Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:35:41 (1774658): wrapper (7.7.26015): starting
18:35:41 (1774658): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 18:35:41] Arguments: --nthreads 4
[2026-03-06 18:35:41] Threads: 4
[2026-03-06 18:35:41] Checking for CVMFS
[2026-03-06 18:35:41] No cvmfs_config command found, will try listing directly
[2026-03-06 18:35:41] CVMFS is ok
[2026-03-06 18:35:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 18:35:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 18:35:41] Further information can be found at the LHC@home message board.
[2026-03-06 18:35:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 18:35:41] Checking for apptainer binary...
[2026-03-06 18:35:41] which: no apptainer in ((null))
[2026-03-06 18:35:41] apptainer is not installed, using version from CVMFS
[2026-03-06 18:35:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 18:35:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot152/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-06 18:35:41] apptainer works
[2026-03-06 18:35:41] Set ATHENA_PROC_NUMBER=4
[2026-03-06 18:35:41] Set ATHENA_CORE_NUMBER=4
[2026-03-06 18:35:41] Starting ATLAS job with PandaID=7040359994
[2026-03-06 18:35:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot152/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 20:09:23]  *** The last 200 lines of the pilot log: ***
[2026-03-06 20:09:23]  lfn=log.48973281._001108.job.log.tgz.1
[2026-03-06 20:09:23]  mtime=0
[2026-03-06 20:09:23]  protocol_id=None
[2026-03-06 20:09:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 20:09:23]  replicas=None
[2026-03-06 20:09:23]  scope=mc23_13p6TeV
[2026-03-06 20:09:23]  status=None
[2026-03-06 20:09:23]  status_code=0
[2026-03-06 20:09:23]  storage_token=
[2026-03-06 20:09:23]  surl=/var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7040359994/log.48973281._001108.job.log.tgz.1
[2026-03-06 20:09:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/7a/log.48973281._001108.job.log.tgz.1
[2026-03-06 20:09:23]  workdir=None
[2026-03-06 20:09:23] ]
[2026-03-06 20:09:23] 2026-03-06 19:08:46,561 | INFO     | transferring file log.48973281._001108.job.log.tgz.1 from /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7040359994/log.48973281._001108.job.log.tgz.1 to /var/lib/
[2026-03-06 20:09:23] 2026-03-06 19:08:46,562 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7040359994/log.48973281._001108.job.log.tgz.1 /var/lib/boinc/var/slot152/slots/0/
[2026-03-06 20:09:23] 2026-03-06 19:08:46,581 | INFO     | adding to output.list: log.48973281._001108.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/7a/log.48973281._001108.job.log.tg
[2026-03-06 20:09:23] 2026-03-06 19:08:46,582 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 20:09:23] 2026-03-06 19:08:46,582 | INFO     | summary of transferred files:
[2026-03-06 20:09:23] 2026-03-06 19:08:46,582 | INFO     |  -- lfn=log.48973281._001108.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 20:09:23] 2026-03-06 19:08:46,582 | INFO     | stage-out finished correctly
[2026-03-06 20:09:23] 2026-03-06 19:08:46,655 | INFO     | monitor loop #403: job 0:7040359994 is in state 'finished'
[2026-03-06 20:09:23] 2026-03-06 19:08:46,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 20:09:23] 2026-03-06 19:08:47,197 | INFO     | time since job start (5573s) is within the limit (349056.0s)
[2026-03-06 20:09:23] 2026-03-06 19:08:48,896 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 20:09:23] 2026-03-06 19:08:49,158 | INFO     | monitor loop #404: job 0:7040359994 is in state 'finished'
[2026-03-06 20:09:23] 2026-03-06 19:08:49,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-06 20:09:23] 2026-03-06 19:08:49,202 | INFO     | time since job start (5575s) is within the limit (349056.0s)
[2026-03-06 20:09:23] 2026-03-06 19:08:49,202 | INFO     | 5580s have passed since pilot start - server update state is 'RUNNING'
[2026-03-06 20:09:23] 2026-03-06 19:08:49,956 | INFO     | job 7040359994 has state=finished
[2026-03-06 20:09:23] 2026-03-06 19:08:49,956 | INFO     | preparing for final server update for job 7040359994 in state='finished'
[2026-03-06 20:09:23] 2026-03-06 19:08:50,536 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,537 | INFO     | reading metadata from: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7040359994/jobReport.json
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot152/slots/0/workernode_map.json
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | this job has now completed (state=finished)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | log transfer has been attempted: DONE
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | job 7040359994 has finished - writing final server update
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19189/.job.ad'
[2026-03-06 20:09:23] 2026-03-06 19:08:50,539 | INFO     | total number of processed events: 400 (read)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,557 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7040359994/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,557 | INFO     | extracted standard info from prmon json
[2026-03-06 20:09:23] 2026-03-06 19:08:50,557 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 20:09:23] 2026-03-06 19:08:50,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 20:09:23] 2026-03-06 19:08:50,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 20:09:23] 2026-03-06 19:08:50,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | fitting pss+swap vs Time
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | sum of square deviations: 183761585.0
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | sum of deviations: -182802634.50000003
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | mean x: 1772821410.5
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | mean y: 2349478.5595238097
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | intersect: 1765919510.5518253
[2026-03-06 20:09:23] 2026-03-06 19:08:50,559 | INFO     | chi2: 0.0005006509770767209
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | current memory leak: -0.99 B/s (using 84 data points, chi2=0.00)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | could have reported an average CPU frequency of 3594 MHz (7 samples)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | ..............................
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . Timing measurements:
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . get job = 0 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . initial setup = 5 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . payload setup = 4 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . stage-in = 0 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . payload execution = 5552 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . stage-out = 0 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | . log creation = 0 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,560 | INFO     | ..............................
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | 
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | job summary report
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | --------------------------------------------------
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | PanDA job id: 7040359994
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | task id: 48973281
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | errors: (none)
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | pilot state: finished 
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | transexitcode: 0
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | exeerrorcode: 0
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | exeerrordiag: 
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | exitcode: 0
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | exitmsg: OK
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | cpuconsumptiontime: 21293 s
[2026-03-06 20:09:23] 2026-03-06 19:08:50,984 | INFO     | nevents: 400
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | neventsw: 0
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | pid: 1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | pgrp: 1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | corecount: 4
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | event service: False
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | sizes: {0: 2295860, 11: 2295860, 5561: 2331539, 5564: 2331539, 5565: 2331733}
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | --------------------------------------------------
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | 
[2026-03-06 20:09:23] 2026-03-06 19:08:50,985 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot152/slots/0
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | job 7040359994 has completed (purged errors)
[2026-03-06 20:09:23] 2026-03-06 19:08:51,004 | INFO     | overall cleanup function is called
[2026-03-06 20:09:23] 2026-03-06 19:08:52,011 | INFO     | --- collectZombieJob: --- 10, [1785194]
[2026-03-06 20:09:23] 2026-03-06 19:08:52,011 | INFO     | zombie collector waiting for pid 1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:52,011 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 20:09:23] 2026-03-06 19:08:52,011 | INFO     | collected zombie processes
[2026-03-06 20:09:23] 2026-03-06 19:08:52,011 | INFO     | will attempt to kill all subprocesses of pid=1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:52,471 | INFO     | process IDs to be killed: [1785194] (in reverse order)
[2026-03-06 20:09:23] 2026-03-06 19:08:52,690 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 20:09:23] 2026-03-06 19:08:52,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 20:09:23] 2026-03-06 19:08:52,720 | INFO     | did not find any defunct processes belonging to 1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:52,748 | INFO     | did not find any defunct processes belonging to 1785194
[2026-03-06 20:09:23] 2026-03-06 19:08:52,748 | INFO     | ready for new job
[2026-03-06 20:09:23] 2026-03-06 19:08:52,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 20:09:23] 2026-03-06 19:08:52,750 | INFO     | **************************************
[2026-03-06 20:09:23] 2026-03-06 19:08:52,750 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 20:09:23] 2026-03-06 19:08:52,750 | INFO     | **************************************
[2026-03-06 20:09:23] 2026-03-06 19:08:52,750 | INFO     | 
[2026-03-06 20:09:23] 2026-03-06 19:08:52,756 | INFO     | architecture information:
[2026-03-06 20:09:23] 2026-03-06 19:08:52,756 | INFO     | executing command: cat /etc/os-release
[2026-03-06 20:09:23] 2026-03-06 19:08:52,768 | INFO     | cat /etc/os-release:
[2026-03-06 20:09:23] NAME="CentOS Linux"
[2026-03-06 20:09:23] VERSION="7 (Core)"
[2026-03-06 20:09:23] ID="centos"
[2026-03-06 20:09:23] ID_LIKE="rhel fedora"
[2026-03-06 20:09:23] VERSION_ID="7"
[2026-03-06 20:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 20:09:23] ANSI_COLOR="0;31"
[2026-03-06 20:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 20:09:23] HOME_URL="https://www.centos.org/"
[2026-03-06 20:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 20:09:23] 
[2026-03-06 20:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 20:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 20:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 20:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 20:09:23] 
[2026-03-06 20:09:23] 2026-03-06 19:08:52,768 | INFO     | **************************************
[2026-03-06 20:09:23] 2026-03-06 19:08:53,271 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-06 20:09:23] 2026-03-06 19:08:53,285 | INFO     | sufficient remaining disk space (20450377728 B)
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | INFO     | update_server=False
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:09:23] 2026-03-06 19:08:53,286 | INFO     | aborting loop
[2026-03-06 20:09:23] 2026-03-06 19:08:53,635 | INFO     | all job control threads have been joined
[2026-03-06 20:09:23] 2026-03-06 19:08:53,853 | INFO     | all data control threads have been joined
[2026-03-06 20:09:23] 2026-03-06 19:08:54,291 | INFO     | [job] job monitor thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,291 | INFO     | [job] retrieve thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,326 | INFO     | all payload control threads have been joined
[2026-03-06 20:09:23] 2026-03-06 19:08:54,426 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,640 | INFO     | [job] control thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 20:09:23] 2026-03-06 19:08:54,808 | INFO     | [job] validate thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,856 | INFO     | [data] control thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:54,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 20:09:23] 2026-03-06 19:08:54,971 | INFO     | [payload] validate_post thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,078 | INFO     | [payload] failed_post thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,091 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,327 | INFO     | [payload] control thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,341 | INFO     | [data] copytool_in thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:55,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 20:09:23] 2026-03-06 19:08:56,623 | INFO     | [job] queue monitor thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:56,650 | INFO     | [data] copytool_out thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:08:58,956 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:09:02,705 | INFO     | [monitor] cgroup control has ended
[2026-03-06 20:09:23] 2026-03-06 19:09:03,375 | INFO     | job.realtimelogging is not enabled
[2026-03-06 20:09:23] 2026-03-06 19:09:04,380 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 20:09:23] 2026-03-06 19:09:04,799 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22855182911296)>', '<ExcThread(monitor, started 22854946277120)>']
[2026-03-06 20:09:23] 2026-03-06 19:09:09,824 | INFO     | all workflow threads have been joined
[2026-03-06 20:09:23] 2026-03-06 19:09:09,824 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 20:09:23] 2026-03-06 19:09:09,824 | INFO     | traces error code: 0
[2026-03-06 20:09:23] 2026-03-06 19:09:09,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 20:09:23] 2026-03-06 19:09:22,851 | INFO     | PID=1779284 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 20:09:23] 2026-03-06 19:09:22,851 | INFO     | .. there are 42 such processes running
[2026-03-06 20:09:23] 2026-03-06 19:09:22,852 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 20:09:23] 2026-03-06 19:09:22,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 20:09:23] 2026-03-06 19:09:22,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 20:09:23] 2026-03-06 19:09:22,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 20:09:23] 2026-03-06 19:09:22,852 | INFO     | [monitor] control thread has ended
[2026-03-06 20:09:23] 2026-03-06 19:09:23,002 [wrapper] ==== pilot stdout END ====
[2026-03-06 20:09:23] 2026-03-06 19:09:23,004 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 20:09:23] 2026-03-06 19:09:23,006 [wrapper] pilotpid: 1779284
[2026-03-06 20:09:23] 2026-03-06 19:09:23,008 [wrapper] Pilot exit status: 0
[2026-03-06 20:09:23] 2026-03-06 19:09:23,016 [wrapper] pandaids: 7040359994
[2026-03-06 20:09:23] 2026-03-06 19:09:23,142 [wrapper] cleanup supervisor_pilot 2481935 1779285
[2026-03-06 20:09:23] 2026-03-06 19:09:23,144 [wrapper] Test setup, not cleaning
[2026-03-06 20:09:23] 2026-03-06 19:09:23,146 [wrapper] apfmon messages muted
[2026-03-06 20:09:23] 2026-03-06 19:09:23,148 [wrapper] ==== wrapper stdout END ====
[2026-03-06 20:09:23] 2026-03-06 19:09:23,151 [wrapper] ==== wrapper stderr END ====
[2026-03-06 20:09:23]  *** Error codes and diagnostics ***
[2026-03-06 20:09:23]     "exeErrorCode": 0,
[2026-03-06 20:09:23]     "exeErrorDiag": "",
[2026-03-06 20:09:23]     "pilotErrorCode": 0,
[2026-03-06 20:09:23]     "pilotErrorDiag": "",
[2026-03-06 20:09:23]  *** Listing of results directory ***
[2026-03-06 20:09:23] total 503028
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc      5111 Mar  4 18:22 queuedata.json
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc    584627 Mar  4 18:22 pilot3.tar.gz
[2026-03-06 20:09:23] -rwx------. 1 boinc boinc     36322 Mar  4 18:22 runpilot2-wrapper.sh
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc       100 Mar  6 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 20:09:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 18:35 run_atlas
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc       105 Mar  6 18:35 job.xml
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc      6707 Mar  6 18:35 init_data.xml
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc 294485646 Mar  6 18:35 EVNT.48716896._000045.pool.root.1
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc     15845 Mar  6 18:35 start_atlas.sh
[2026-03-06 20:09:23] drwxrwx--x. 2 boinc boinc      4096 Mar  6 18:35 shared
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc    597960 Mar  6 18:35 input.tar.gz
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc         0 Mar  6 18:35 boinc_lockfile
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc      2597 Mar  6 18:35 pandaJob.out
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc    999496 Mar  6 18:35 agis_schedconf.cvmfs.json
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc   1521291 Mar  6 18:35 agis_ddmendpoints.agis.ALL.json
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc       443 Mar  6 18:35 workernode_map.json
[2026-03-06 20:09:23] drwx------. 5 boinc boinc      4096 Mar  6 18:35 pilot3
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc       529 Mar  6 20:08 boinc_task_state.xml
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc 214514057 Mar  6 20:08 HITS.48973281._001108.pool.root.1
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc      1030 Mar  6 20:08 memory_monitor_summary.json
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc    270463 Mar  6 20:08 log.48973281._001108.job.log.tgz.1
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc      6343 Mar  6 20:08 heartbeat.json
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc        27 Mar  6 20:09 wrapper_checkpoint.txt
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc      8192 Mar  6 20:09 boinc_mmap_file
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc        95 Mar  6 20:09 pilot_heartbeat.json
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc       823 Mar  6 20:09 pilotlog.txt
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc    811215 Mar  6 20:09 log.48973281._001108.job.log.1
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc       357 Mar  6 20:09 output.list
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc       620 Mar  6 20:09 runtime_log
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc   1095680 Mar  6 20:09 result.tar.gz
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc      9221 Mar  6 20:09 runtime_log.err
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc       662 Mar  6 20:09 X9NKDmt64H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDml8KLDm3jlqon.diag
[2026-03-06 20:09:23] -rw-r--r--. 1 boinc boinc     21515 Mar  6 20:09 stderr.txt
[2026-03-06 20:09:23] HITS file was successfully produced:
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc 214514057 Mar  6 20:08 shared/HITS.pool.root.1
[2026-03-06 20:09:23]  *** Contents of shared directory: ***
[2026-03-06 20:09:23] total 498752
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc 294485646 Mar  6 18:35 ATLAS.root_0
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc     15845 Mar  6 18:35 start_atlas.sh
[2026-03-06 20:09:23] -rw-r--r--. 2 boinc boinc    597960 Mar  6 18:35 input.tar.gz
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc 214514057 Mar  6 20:08 HITS.pool.root.1
[2026-03-06 20:09:23] -rw-------. 1 boinc boinc   1095680 Mar  6 20:09 result.tar.gz
20:09:25 (1774658): run_atlas exited; CPU time 21549.773122
20:09:25 (1774658): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN