Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-04 14:57:17 (11528): vboxwrapper version 26210
2026-03-04 14:57:17 (11528): BOINC client version: 8.2.8
2026-03-04 14:57:18 (11528): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-04 14:57:18 (11528): Successfully copied 'init_data.xml' to the shared directory.
2026-03-04 14:57:18 (11528): Create VM. (boinc_88be136e5529d158, slot#2)
2026-03-04 14:57:19 (11528): Setting Memory Size for VM. (4400MB)
2026-03-04 14:57:19 (11528): Setting CPU Count for VM. (4)
2026-03-04 14:57:19 (11528): Setting Chipset Options for VM.
2026-03-04 14:57:19 (11528): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-04 14:57:20 (11528): Setting Boot Options for VM.
2026-03-04 14:57:20 (11528): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-04 14:57:20 (11528): Enabling VM Network Access.
2026-03-04 14:57:21 (11528): Disabling USB Support for VM.
2026-03-04 14:57:21 (11528): Disabling COM Port Support for VM.
2026-03-04 14:57:21 (11528): Disabling LPT Port Support for VM.
2026-03-04 14:57:21 (11528): Disabling Audio Support for VM.
2026-03-04 14:57:22 (11528): Disabling Clipboard Support for VM.
2026-03-04 14:57:22 (11528): Disabling Drag and Drop Support for VM.
2026-03-04 14:57:22 (11528): Adding storage controller(s) to VM.
2026-03-04 14:57:22 (11528): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-04 14:57:23 (11528): Adding VirtualBox Guest Additions to VM.
2026-03-04 14:57:23 (11528): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-04 14:57:23 (11528): forwarding host port 51256 to guest port 80
2026-03-04 14:57:24 (11528): Enabling remote desktop for VM.
2026-03-04 14:57:24 (11528): Required extension pack not installed, remote desktop not enabled.
2026-03-04 14:57:24 (11528): Enabling shared directory for VM.
2026-03-04 14:57:24 (11528): Starting VM using VBoxManage interface. (boinc_88be136e5529d158, slot#2)
2026-03-04 14:57:29 (11528): Successfully started VM. (PID = '8828')
2026-03-04 14:57:29 (11528): Reporting VM Process ID to BOINC.
2026-03-04 14:57:29 (11528): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-04 14:57:29 (11528): Guest Log: CPUID EDX: 0x178bfbff
2026-03-04 14:57:29 (11528): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-04 14:57:29 (11528): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-04 14:57:29 (11528): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-04 14:57:29 (11528): Detected: Web Application Enabled (http://localhost:51256)
2026-03-04 14:57:29 (11528): Preference change detected
2026-03-04 14:57:29 (11528): Setting CPU throttle for VM. (80%)
2026-03-04 14:57:29 (11528): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-04 14:57:31 (11528): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-04 14:57:31 (11528): Guest Log: BIOS: Booting from Hard Disk...
2026-03-04 14:57:34 (11528): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-04 14:57:34 (11528): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-04 14:57:34 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-04 14:57:41 (11528): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-04 14:57:41 (11528): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-04 14:57:47 (11528): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000114 main     Log opened 2026-03-04T14:57:45.427016000Z
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000202 main     OS Product: Linux
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000255 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000280 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000280 main     Process ID: 1301
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.000281 main     Package type: LINUX_64BITS_GENERIC
2026-03-04 14:57:47 (11528): Guest Log: 00:00:00.001649 main     5.2.32 r132073 started. Verbose level = 0
2026-03-04 14:57:47 (11528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-04 14:57:47 (11528): Guest Log: [INFO] Mounting shared directory
2026-03-04 14:57:47 (11528): Guest Log: [INFO] Checking for init_data.xml
2026-03-04 14:57:52 (11528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-04 14:57:52 (11528): Guest Log: [INFO] Detected branch: prod
2026-03-04 14:57:53 (11528): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-04 14:57:53 (11528): Guest Log: Copying input files
2026-03-04 14:57:54 (11528): Guest Log: Copied input files into RunAtlas.
2026-03-04 14:57:54 (11528): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-04 14:57:54 (11528): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-04 14:57:54 (11528): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-04 14:57:54 (11528): Guest Log: Further information can be found at the LHC@home message board.
2026-03-04 14:57:57 (11528): Guest Log: 00:00:10.009893 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 527 942 000ns (GuestNow=1 772 654 276 960 348 000 ns GuestLast=1 772 636 265 432 406 000 ns fSetTimeLastLoop=true )
2026-03-04 14:58:49 (11528): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-04 14:58:50 (11528): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-04 14:58:50 (11528): Guest Log: 2.6.3.0 1581 1 30120 156889 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-04 14:58:51 (11528): Guest Log: copied the webapp to /var/www
2026-03-04 14:58:51 (11528): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-04 14:58:51 (11528): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-04 14:58:51 (11528): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-04 14:58:51 (11528): Guest Log:  *** Starting ATLAS job. (PandaID=7040351126 taskID=48973281) ***
2026-03-04 16:37:33 (11528): Status Report: Elapsed Time: '6000.000000'
2026-03-04 16:37:33 (11528): Status Report: CPU Time: '18286.703125'
2026-03-04 18:17:38 (11528): Status Report: Elapsed Time: '12000.000000'
2026-03-04 18:17:38 (11528): Status Report: CPU Time: '37869.171875'
2026-03-04 19:09:35 (11528): Guest Log:  *** Job finished ***
2026-03-04 19:09:35 (11528): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:02,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:02,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:28,610 | INFO     | [monitor] cgroup control has ended
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:29,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140267638372160)>', '<ExcThread(monitor, started 140266518345472)>']
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:29,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:29,816 | INFO     | [monitor] control thread has ended
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,101 | INFO     | all workflow threads have been joined
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,101 | INFO     | end of generic workflow (traces error code: 0)
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,101 | INFO     | traces error code: 0
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,219 [wrapper] ==== pilot stdout END ====
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,232 [wrapper] ==== wrapper stdout RESUME ====
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,252 [wrapper] pilotpid: 6001
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,261 [wrapper] Pilot exit status: 0
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,345 [wrapper] pandaids: 7040351126
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,442 [wrapper] cleanup supervisor_pilot 28541 6002
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,462 [wrapper] Test setup, not cleaning
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,486 [wrapper] apfmon messages muted
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,499 [wrapper] ==== wrapper stdout END ====
2026-03-04 19:09:35 (11528): Guest Log: 2026-03-05 00:09:34,524 [wrapper] ==== wrapper stderr END ====
2026-03-04 19:09:35 (11528): Guest Log:  *** Error codes and diagnostics ***
2026-03-04 19:09:35 (11528): Guest Log:     "exeErrorCode": 0,
2026-03-04 19:09:35 (11528): Guest Log:     "exeErrorDiag": "",
2026-03-04 19:09:35 (11528): Guest Log:     "pilotErrorCode": 0,
2026-03-04 19:09:35 (11528): Guest Log:     "pilotErrorDiag": "",
2026-03-04 19:09:35 (11528): Guest Log:  *** Listing of results directory ***
2026-03-04 19:09:35 (11528): Guest Log: total 215664
2026-03-04 19:09:35 (11528): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 16:22 pilot3.tar.gz
2026-03-04 19:09:35 (11528): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 16:49 queuedata.json
2026-03-04 19:09:35 (11528): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 16:50 runpilot2-wrapper.sh
2026-03-04 19:09:35 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas     15012 Mar  4 19:57 init_data.xml
2026-03-04 19:09:35 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas    597963 Mar  4 19:57 input.tar.gz
2026-03-04 19:09:35 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  4 19:57 start_atlas.sh
2026-03-04 19:09:35 (11528): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  4 19:57 EVNT.48716896._000020.pool.root.1 -> /data/./ATLAS.root_0
2026-03-04 19:09:35 (11528): Guest Log: -rw-r--r--. 1 atlas atlas      2595 Mar  4 19:58 pandaJob.out
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas    997757 Mar  4 19:59 agis_schedconf.cvmfs.json
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas       425 Mar  4 20:00 workernode_map.json
2026-03-04 19:09:35 (11528): Guest Log: drwx------. 5 atlas atlas      4096 Mar  4 20:00 pilot3
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas 212009191 Mar  5 00:07 HITS.48973281._000483.pool.root.1
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas      1030 Mar  5 00:08 memory_monitor_summary.json
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 00:08 pilot_heartbeat.json
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 00:08 agis_ddmendpoints.agis.ALL.json
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas    404527 Mar  5 00:08 log.48973281._000483.job.log.tgz.1
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas      6363 Mar  5 00:08 heartbeat.json
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  5 00:09 pilotlog.txt
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas   2073865 Mar  5 00:09 log.48973281._000483.job.log.1
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 00:09 output.list
2026-03-04 19:09:35 (11528): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 00:09 runtime_log
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas   2498560 Mar  5 00:09 result.tar.gz
2026-03-04 19:09:35 (11528): Guest Log: -rw-r--r--. 1 atlas atlas      8719 Mar  5 00:09 runtime_log.err
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas       648 Mar  5 00:09 AWjNDmIb4H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmX1KLDmfM4aVo.diag
2026-03-04 19:09:35 (11528): Guest Log: Looking for outputfile HITS.48973281._000483.pool.root.1
2026-03-04 19:09:35 (11528): Guest Log: HITS file was successfully produced
2026-03-04 19:09:35 (11528): Guest Log: -rw-------. 1 atlas atlas 212009191 Mar  5 00:07 /home/atlas/RunAtlas/HITS.48973281._000483.pool.root.1
2026-03-04 19:09:37 (11528): Guest Log: Successfully finished the ATLAS job!
2026-03-04 19:09:37 (11528): Guest Log: Copying the results back to the shared directory!
2026-03-04 19:09:37 (11528): Guest Log:  *** Contents of shared directory: ***
2026-03-04 19:09:37 (11528): Guest Log: total 500520
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root 297386327 Mar  4 19:57 ATLAS.root_0
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root 212009191 Mar  5 00:09 HITS.pool.root.1
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root     15012 Mar  4 19:57 init_data.xml
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root    597963 Mar  4 19:57 input.tar.gz
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root   2498560 Mar  5 00:09 result.tar.gz
2026-03-04 19:09:37 (11528): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  4 19:57 start_atlas.sh
2026-03-04 19:09:37 (11528): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-04 19:09:37 (11528): VM Completion File Detected.
2026-03-04 19:09:37 (11528): Powering off VM.
2026-03-04 19:09:38 (11528): Successfully stopped VM.
2026-03-04 19:09:38 (11528): Deregistering VM. (boinc_88be136e5529d158, slot#2)
2026-03-04 19:09:38 (11528): Removing network bandwidth throttle group from VM.
2026-03-04 19:09:38 (11528): Removing VM from VirtualBox.
2026-03-04 19:09:43 (11528): called boinc_finish(0)

</stderr_txt>
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