Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:05:36 (15557): wrapper (7.7.26015): starting
04:05:36 (15557): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 04:05:36] Arguments: --nthreads 8
[2026-03-05 04:05:36] Threads: 8
[2026-03-05 04:05:36] Checking for CVMFS
[2026-03-05 04:05:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 04:05:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 04:05:37] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 04:05:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 04:05:38] 2.11.2.0 20999 114051 128552 156899 1 93 21960478 25165824 1038 130560 155 33920681 99.823 22720632 792 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-05 04:05:38] CVMFS is ok
[2026-03-05 04:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 04:05:38] Checking for apptainer binary...
[2026-03-05 04:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 04:05:38] Running /usr/bin/apptainer --version
[2026-03-05 04:05:38] apptainer version 1.3.2-1.el7
[2026-03-05 04:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 04:06:11] cg-vwn368.simple-grid.lan
[2026-03-05 04:06:11] apptainer works
[2026-03-05 04:06:11] Set ATHENA_PROC_NUMBER=8
[2026-03-05 04:06:11] Set ATHENA_CORE_NUMBER=8
[2026-03-05 04:06:11] Starting ATLAS job with PandaID=7040349139
[2026-03-05 04:06:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 08:21:54]  *** The last 200 lines of the pilot log: ***
[2026-03-05 08:21:54] 2026-03-05 07:20:51,840 | INFO     | log transfer has been attempted: DONE
[2026-03-05 08:21:54] 2026-03-05 07:20:51,841 | INFO     | job 7040349139 has finished - writing final server update
[2026-03-05 08:21:54] 2026-03-05 07:20:51,841 | INFO     | total number of processed events: 400 (read)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,843 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7040349139/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,844 | INFO     | extracted standard info from prmon json
[2026-03-05 08:21:54] 2026-03-05 07:20:51,844 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 08:21:54] 2026-03-05 07:20:51,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 08:21:54] 2026-03-05 07:20:51,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 08:21:54] 2026-03-05 07:20:51,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 08:21:54] 2026-03-05 07:20:51,850 | INFO     | fitting pss+swap vs Time
[2026-03-05 08:21:54] 2026-03-05 07:20:51,851 | INFO     | sum of square deviations: 4286517580.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,853 | INFO     | sum of deviations: 59958166543.00001
[2026-03-05 08:21:54] 2026-03-05 07:20:51,853 | INFO     | mean x: 1772687944.5
[2026-03-05 08:21:54] 2026-03-05 07:20:51,853 | INFO     | mean y: 2477984.841666667
[2026-03-05 08:21:54] 2026-03-05 07:20:51,853 | INFO     | intersect: -24793202196.434845
[2026-03-05 08:21:54] 2026-03-05 07:20:51,854 | INFO     | chi2: 7.297166091514219
[2026-03-05 08:21:54] 2026-03-05 07:20:51,854 | INFO     | sum of square deviations: 4024149870.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,856 | INFO     | sum of deviations: 74836077706.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,856 | INFO     | mean x: 1772687792.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,857 | INFO     | mean y: 2486475.570212766
[2026-03-05 08:21:54] 2026-03-05 07:20:51,857 | INFO     | intersect: -32963731393.097176
[2026-03-05 08:21:54] 2026-03-05 07:20:51,857 | INFO     | chi2: 6.592304043824877
[2026-03-05 08:21:54] 2026-03-05 07:20:51,857 | INFO     | current chi2=6.592304043824877 (change=9.659394329930596 %)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,857 | INFO     | right removable region: 234
[2026-03-05 08:21:54] 2026-03-05 07:20:51,858 | INFO     | sum of square deviations: 4024149870.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,860 | INFO     | sum of deviations: -22425776541.000004
[2026-03-05 08:21:54] 2026-03-05 07:20:51,860 | INFO     | mean x: 1772688097.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,860 | INFO     | mean y: 2525831.421276596
[2026-03-05 08:21:54] 2026-03-05 07:20:51,860 | INFO     | intersect: 9881359479.386913
[2026-03-05 08:21:54] 2026-03-05 07:20:51,861 | INFO     | chi2: 2.6249784317163565
[2026-03-05 08:21:54] 2026-03-05 07:20:51,861 | INFO     | current chi2=2.6249784317163565 (change=64.0274265544139 %)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,861 | INFO     | sum of square deviations: 3772712597.5
[2026-03-05 08:21:54] 2026-03-05 07:20:51,863 | INFO     | sum of deviations: -66005277651.999985
[2026-03-05 08:21:54] 2026-03-05 07:20:51,863 | INFO     | mean x: 1772688249.5
[2026-03-05 08:21:54] 2026-03-05 07:20:51,863 | INFO     | mean y: 2552110.2782608694
[2026-03-05 08:21:54] 2026-03-05 07:20:51,863 | INFO     | intersect: 31016518076.363308
[2026-03-05 08:21:54] 2026-03-05 07:20:51,864 | INFO     | chi2: 1.0590271989769988
[2026-03-05 08:21:54] 2026-03-05 07:20:51,864 | INFO     | current chi2=1.0590271989769988 (change=59.65577521775872 %)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,864 | INFO     | sum of square deviations: 3531973200.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,866 | INFO     | sum of deviations: -71979942172.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,867 | INFO     | mean x: 1772688402.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,867 | INFO     | mean y: 2555881.466666667
[2026-03-05 08:21:54] 2026-03-05 07:20:51,867 | INFO     | intersect: 36129106520.33762
[2026-03-05 08:21:54] 2026-03-05 07:20:51,867 | INFO     | chi2: 0.9985466884026267
[2026-03-05 08:21:54] 2026-03-05 07:20:51,868 | INFO     | current chi2=0.9985466884026267 (change=5.7109496935296065 %)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,868 | INFO     | left removable region: 30
[2026-03-05 08:21:54] 2026-03-05 07:20:51,868 | INFO     | sum of square deviations: 2632440055.0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,870 | INFO     | sum of deviations: -37314466007.49999
[2026-03-05 08:21:54] 2026-03-05 07:20:51,870 | INFO     | mean x: 1772688676.5
[2026-03-05 08:21:54] 2026-03-05 07:20:51,870 | INFO     | mean y: 2553907.1911764704
[2026-03-05 08:21:54] 2026-03-05 07:20:51,870 | INFO     | intersect: 25130165544.729263
[2026-03-05 08:21:54] 2026-03-05 07:20:51,871 | INFO     | chi2: 0.1920548826483563
[2026-03-05 08:21:54] 2026-03-05 07:20:51,871 | INFO     | current memory leak: -14.17 B/s (using 204 data points, chi2=0.19)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | ..............................
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . Timing measurements:
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . get job = 0 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . initial setup = 117 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . payload setup = 157 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . stage-in = 0 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . payload execution = 14729 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,872 | INFO     | . stage-out = 1 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,873 | INFO     | . log creation = 0 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,873 | INFO     | ..............................
[2026-03-05 08:21:54] 2026-03-05 07:20:51,987 | INFO     | 
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | job summary report
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | --------------------------------------------------
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | PanDA job id: 7040349139
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | task id: 48973281
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | errors: (none)
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 08:21:54] 2026-03-05 07:20:51,988 | INFO     | pilot state: finished 
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | transexitcode: 0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | exeerrorcode: 0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | exeerrordiag: 
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | exitcode: 0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | exitmsg: OK
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | cpuconsumptiontime: 64524 s
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | nevents: 400
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | neventsw: 0
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | pid: 24009
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | pgrp: 24009
[2026-03-05 08:21:54] 2026-03-05 07:20:51,989 | INFO     | corecount: 8
[2026-03-05 08:21:54] 2026-03-05 07:20:51,990 | INFO     | event service: False
[2026-03-05 08:21:54] 2026-03-05 07:20:51,990 | INFO     | sizes: {0: 2294752, 1: 2295437, 2: 2295898, 13: 2295898, 14890: 2326900, 14891: 2326899, 14892: 2336081, 14894: 2336137, 14896: 2336331}
[2026-03-05 08:21:54] 2026-03-05 07:20:51,990 | INFO     | --------------------------------------------------
[2026-03-05 08:21:54] 2026-03-05 07:20:51,990 | INFO     | 
[2026-03-05 08:21:54] 2026-03-05 07:20:51,990 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 08:21:54] 2026-03-05 07:20:52,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 08:21:54] 2026-03-05 07:20:52,018 | INFO     | job 7040349139 has completed (purged errors)
[2026-03-05 08:21:54] 2026-03-05 07:20:52,018 | INFO     | overall cleanup function is called
[2026-03-05 08:21:54] 2026-03-05 07:20:53,026 | INFO     | --- collectZombieJob: --- 10, [24009]
[2026-03-05 08:21:54] 2026-03-05 07:20:53,026 | INFO     | zombie collector waiting for pid 24009
[2026-03-05 08:21:54] 2026-03-05 07:20:53,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 08:21:54] 2026-03-05 07:20:53,027 | INFO     | collected zombie processes
[2026-03-05 08:21:54] 2026-03-05 07:20:53,027 | INFO     | will attempt to kill all subprocesses of pid=24009
[2026-03-05 08:21:54] 2026-03-05 07:20:53,103 | INFO     | process IDs to be killed: [24009] (in reverse order)
[2026-03-05 08:21:54] 2026-03-05 07:20:53,200 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 08:21:54] 2026-03-05 07:20:53,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 08:21:54] 2026-03-05 07:20:53,202 | INFO     | did not find any defunct processes belonging to 24009
[2026-03-05 08:21:54] 2026-03-05 07:20:53,204 | INFO     | did not find any defunct processes belonging to 24009
[2026-03-05 08:21:54] 2026-03-05 07:20:53,204 | INFO     | ready for new job
[2026-03-05 08:21:54] 2026-03-05 07:20:53,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 08:21:54] 2026-03-05 07:20:53,207 | INFO     | **************************************
[2026-03-05 08:21:54] 2026-03-05 07:20:53,207 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 08:21:54] 2026-03-05 07:20:53,207 | INFO     | **************************************
[2026-03-05 08:21:54] 2026-03-05 07:20:53,207 | INFO     | 
[2026-03-05 08:21:54] 2026-03-05 07:20:53,208 | INFO     | pilot is running in a VM
[2026-03-05 08:21:54] 2026-03-05 07:20:53,208 | INFO     | architecture information:
[2026-03-05 08:21:54] 2026-03-05 07:20:53,208 | INFO     | executing command: cat /etc/os-release
[2026-03-05 08:21:54] 2026-03-05 07:20:53,228 | INFO     | cat /etc/os-release:
[2026-03-05 08:21:54] NAME="CentOS Linux"
[2026-03-05 08:21:54] VERSION="7 (Core)"
[2026-03-05 08:21:54] ID="centos"
[2026-03-05 08:21:54] ID_LIKE="rhel fedora"
[2026-03-05 08:21:54] VERSION_ID="7"
[2026-03-05 08:21:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 08:21:54] ANSI_COLOR="0;31"
[2026-03-05 08:21:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 08:21:54] HOME_URL="https://www.centos.org/"
[2026-03-05 08:21:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 08:21:54] 
[2026-03-05 08:21:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 08:21:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 08:21:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 08:21:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 08:21:54] 
[2026-03-05 08:21:54] 2026-03-05 07:20:53,229 | INFO     | **************************************
[2026-03-05 08:21:54] 2026-03-05 07:20:53,734 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-03-05 08:21:54] 2026-03-05 07:20:53,754 | INFO     | sufficient remaining disk space (497257807872 B)
[2026-03-05 08:21:54] 2026-03-05 07:20:53,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 08:21:54] 2026-03-05 07:20:53,754 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 08:21:54] 2026-03-05 07:20:53,754 | INFO     | update_server=False
[2026-03-05 08:21:54] 2026-03-05 07:20:53,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 08:21:54] 2026-03-05 07:20:53,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:21:54] 2026-03-05 07:20:54,104 | INFO     | all job control threads have been joined
[2026-03-05 08:21:54] 2026-03-05 07:20:54,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 08:21:54] 2026-03-05 07:20:54,386 | INFO     | all data control threads have been joined
[2026-03-05 08:21:54] 2026-03-05 07:20:54,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 08:21:54] 2026-03-05 07:20:54,485 | INFO     | aborting loop
[2026-03-05 08:21:54] 2026-03-05 07:20:54,760 | INFO     | [job] retrieve thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:54,761 | INFO     | [job] queue monitor thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,018 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,110 | INFO     | [job] control thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,115 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,148 | INFO     | all payload control threads have been joined
[2026-03-05 08:21:54] 2026-03-05 07:20:55,392 | INFO     | [data] control thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,419 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,420 | INFO     | [data] copytool_in thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,465 | INFO     | [payload] failed_post thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,490 | INFO     | [job] job monitor thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:55,987 | INFO     | [job] validate thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:56,053 | INFO     | [payload] validate_post thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:56,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 08:21:54] 2026-03-05 07:20:56,154 | INFO     | [payload] control thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:20:56,172 | INFO     | [data] copytool_out thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:21:00,079 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 08:21:54] 2026-03-05 07:21:23,966 | INFO     | PID=19538 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 08:21:54] 2026-03-05 07:21:23,966 | INFO     | .. there are 2 such processes running
[2026-03-05 08:21:54] 2026-03-05 07:21:23,967 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 08:21:54] 2026-03-05 07:21:23,967 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 08:21:54] 2026-03-05 07:21:23,967 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 08:21:54] 2026-03-05 07:21:47,922 | INFO     | [monitor] cgroup control has ended
[2026-03-05 08:21:54] 2026-03-05 07:21:48,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888522610496)>', '<ExcThread(monitor, started 139887940458240)>']
[2026-03-05 08:21:54] 2026-03-05 07:21:49,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 08:21:54] 2026-03-05 07:21:49,097 | INFO     | [monitor] control thread has ended
[2026-03-05 08:21:54] 2026-03-05 07:21:53,650 | INFO     | all workflow threads have been joined
[2026-03-05 08:21:54] 2026-03-05 07:21:53,651 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 08:21:54] 2026-03-05 07:21:53,651 | INFO     | traces error code: 0
[2026-03-05 08:21:54] 2026-03-05 07:21:53,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 08:21:54] 2026-03-05 07:21:53,783 [wrapper] ==== pilot stdout END ====
[2026-03-05 08:21:54] 2026-03-05 07:21:53,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 08:21:54] 2026-03-05 07:21:53,791 [wrapper] pilotpid: 19538
[2026-03-05 08:21:54] 2026-03-05 07:21:53,796 [wrapper] Pilot exit status: 0
[2026-03-05 08:21:54] 2026-03-05 07:21:53,829 [wrapper] pandaids: 7040349139
[2026-03-05 08:21:54] 2026-03-05 07:21:53,915 [wrapper] cleanup supervisor_pilot 31342 19539
[2026-03-05 08:21:54] 2026-03-05 07:21:53,920 [wrapper] Test setup, not cleaning
[2026-03-05 08:21:54] 2026-03-05 07:21:53,924 [wrapper] apfmon messages muted
[2026-03-05 08:21:54] 2026-03-05 07:21:53,946 [wrapper] ==== wrapper stdout END ====
[2026-03-05 08:21:54] 2026-03-05 07:21:53,950 [wrapper] ==== wrapper stderr END ====
[2026-03-05 08:21:54]  *** Error codes and diagnostics ***
[2026-03-05 08:21:54]     "exeErrorCode": 0,
[2026-03-05 08:21:54]     "exeErrorDiag": "",
[2026-03-05 08:21:54]     "pilotErrorCode": 0,
[2026-03-05 08:21:54]     "pilotErrorDiag": "",
[2026-03-05 08:21:54]  *** Listing of results directory ***
[2026-03-05 08:21:54] total 505004
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc    584627 Mar  4 17:22 pilot3.tar.gz
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc      5111 Mar  4 17:49 queuedata.json
[2026-03-05 08:21:54] -rwx------. 1 boinc boinc     36322 Mar  4 17:49 runpilot2-wrapper.sh
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc       100 Mar  5 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 08:21:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 04:05 run_atlas
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc       105 Mar  5 04:05 job.xml
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc      6390 Mar  5 04:05 init_data.xml
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc 296979268 Mar  5 04:05 EVNT.48716896._000010.pool.root.1
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:05 start_atlas.sh
[2026-03-05 08:21:54] drwxrwx--x. 2 boinc boinc        68 Mar  5 04:05 shared
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc    597962 Mar  5 04:05 input.tar.gz
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc         0 Mar  5 04:05 boinc_lockfile
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc      2594 Mar  5 04:06 pandaJob.out
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc       415 Mar  5 04:12 workernode_map.json
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc    997757 Mar  5 04:12 agis_schedconf.cvmfs.json
[2026-03-05 08:21:54] drwx------. 5 boinc boinc      4096 Mar  5 04:12 pilot3
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc 211077614 Mar  5 08:20 HITS.48973281._000240.pool.root.1
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc       530 Mar  5 08:20 boinc_task_state.xml
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc      1021 Mar  5 08:20 memory_monitor_summary.json
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc   1521291 Mar  5 08:20 agis_ddmendpoints.agis.ALL.json
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc    474162 Mar  5 08:20 log.48973281._000240.job.log.tgz.1
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc      6326 Mar  5 08:20 heartbeat.json
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc        95 Mar  5 08:21 pilot_heartbeat.json
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc        28 Mar  5 08:21 wrapper_checkpoint.txt
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc      8192 Mar  5 08:21 boinc_mmap_file
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc      4880 Mar  5 08:21 pilotlog.txt
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc   2100313 Mar  5 08:21 log.48973281._000240.job.log.1
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc       357 Mar  5 08:21 output.list
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc       620 Mar  5 08:21 runtime_log
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc   2590720 Mar  5 08:21 result.tar.gz
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc      8816 Mar  5 08:21 runtime_log.err
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc       656 Mar  5 08:21 FdJMDmEb4H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdxILDmA7soPo.diag
[2026-03-05 08:21:54] -rw-r--r--. 1 boinc boinc     20726 Mar  5 08:21 stderr.txt
[2026-03-05 08:21:54] HITS file was successfully produced:
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc 211077614 Mar  5 08:20 shared/HITS.pool.root.1
[2026-03-05 08:21:54]  *** Contents of shared directory: ***
[2026-03-05 08:21:54] total 499284
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc 296979268 Mar  5 04:05 ATLAS.root_0
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc     15845 Mar  5 04:05 start_atlas.sh
[2026-03-05 08:21:54] -rw-r--r--. 2 boinc boinc    597962 Mar  5 04:05 input.tar.gz
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc 211077614 Mar  5 08:20 HITS.pool.root.1
[2026-03-05 08:21:54] -rw-------. 1 boinc boinc   2590720 Mar  5 08:21 result.tar.gz
08:21:55 (15557): run_atlas exited; CPU time 64686.548356
08:21:55 (15557): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN