Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:04:51 (3545833): wrapper (7.7.26015): starting
14:04:51 (3545833): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 14:04:51] Arguments: --nthreads 8
[2026-03-04 14:04:51] Threads: 8
[2026-03-04 14:04:51] Checking for CVMFS
[2026-03-04 14:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 14:04:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 14:04:53] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 14:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 14:04:53] 2.13.3.0 8993 92350 301964 156887 3 784 31043581 40960001 32190 16776704 0 576795145 99.753 426147880 47002 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 14:04:53] CVMFS is ok
[2026-03-04 14:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 14:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 14:04:53] Further information can be found at the LHC@home message board.
[2026-03-04 14:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 14:04:53] Checking for apptainer binary...
[2026-03-04 14:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 14:04:53] Running /usr/bin/apptainer --version
[2026-03-04 14:04:53] apptainer version 1.4.5-2.el9
[2026-03-04 14:04:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 14:04:54] c-208-40.aglt2.org
[2026-03-04 14:04:54] apptainer works
[2026-03-04 14:04:54] Set ATHENA_PROC_NUMBER=8
[2026-03-04 14:04:54] Set ATHENA_CORE_NUMBER=8
[2026-03-04 14:04:54] Starting ATLAS job with PandaID=7038516580
[2026-03-04 14:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 15:49:45]  *** The last 200 lines of the pilot log: ***
[2026-03-04 15:49:46]  replicas=None
[2026-03-04 15:49:46]  scope=mc23_13p6TeV
[2026-03-04 15:49:46]  status=None
[2026-03-04 15:49:46]  status_code=0
[2026-03-04 15:49:46]  storage_token=
[2026-03-04 15:49:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7038516580/log.48955010._002262.job.log.tgz.1
[2026-03-04 15:49:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/7c/log.48955010._002262.job.log.tgz.1
[2026-03-04 15:49:46]  workdir=None
[2026-03-04 15:49:46] ]
[2026-03-04 15:49:46] 2026-03-04 20:48:31,250 | INFO     | transferring file log.48955010._002262.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/log.48955010._002262.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-04 15:49:46] 2026-03-04 20:48:31,250 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/log.48955010._002262.job.log.tgz.1 /tmp/boinchome/slots/0/log.48955010._002262.job
[2026-03-04 15:49:46] 2026-03-04 20:48:31,380 | INFO     | adding to output.list: log.48955010._002262.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0b/7c/log.48955010._002262.job.log.tg
[2026-03-04 15:49:46] 2026-03-04 20:48:31,381 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 15:49:46] 2026-03-04 20:48:31,381 | INFO     | summary of transferred files:
[2026-03-04 15:49:46] 2026-03-04 20:48:31,381 | INFO     |  -- lfn=log.48955010._002262.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 15:49:46] 2026-03-04 20:48:31,381 | INFO     | stage-out finished correctly
[2026-03-04 15:49:46] 2026-03-04 20:48:31,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 15:49:46] 2026-03-04 20:48:31,814 | WARNING  | process 3571729 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 15:49:46] 2026-03-04 20:48:31,814 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,819 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3259883 B
[2026-03-04 15:49:46] 2026-03-04 20:48:31,819 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15831 B
[2026-03-04 15:49:46] 2026-03-04 20:48:31,819 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 15:49:46] 2026-03-04 20:48:31,866 | INFO     | sufficient remaining disk space (168929787904 B)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,866 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,867 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7038516580: 3568946 B (within 5033164800 B limit)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,867 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7038516580/HITS.48955010._002262.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,867 | INFO     | total size of present files: 0 B (workdir size: 3568946 B)
[2026-03-04 15:49:46] 2026-03-04 20:48:31,867 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/HITS.48955010._002262.pool.root.1 since it does not exist
[2026-03-04 15:49:46] 2026-03-04 20:48:32,988 | INFO     | time since job start (6124s) is within the limit (349056.0s)
[2026-03-04 15:49:46] 2026-03-04 20:48:33,381 | INFO     | number of running child processes to parent process 3571729: 1
[2026-03-04 15:49:46] 2026-03-04 20:48:33,381 | INFO     | maximum number of monitored processes: 6
[2026-03-04 15:49:46] 2026-03-04 20:48:34,256 | INFO     | job 7038516580 has state=finished
[2026-03-04 15:49:46] 2026-03-04 20:48:34,256 | INFO     | preparing for final server update for job 7038516580 in state='finished'
[2026-03-04 15:49:46] 2026-03-04 20:48:34,257 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/jobReport.json
[2026-03-04 15:49:46] 2026-03-04 20:48:34,258 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-04 15:49:46] 2026-03-04 20:48:34,258 | INFO     | this job has now completed (state=finished)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,258 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,258 | INFO     | log transfer has been attempted: DONE
[2026-03-04 15:49:46] 2026-03-04 20:48:34,258 | INFO     | job 7038516580 has finished - writing final server update
[2026-03-04 15:49:46] 2026-03-04 20:48:34,259 | INFO     | total number of processed events: 400 (read)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,305 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7038516580/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,305 | INFO     | extracted standard info from prmon json
[2026-03-04 15:49:46] 2026-03-04 20:48:34,306 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 15:49:46] 2026-03-04 20:48:34,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 15:49:46] 2026-03-04 20:48:34,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 15:49:46] 2026-03-04 20:48:34,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 15:49:46] 2026-03-04 20:48:34,330 | INFO     | fitting pss+swap vs Time
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | sum of square deviations: 241423431.43478242
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | sum of deviations: 6265896352.282606
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | mean x: 1772654346.6304348
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | mean y: 2465172.684782609
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | intersect: -46004951499.33796
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | chi2: 0.20061968516486056
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | current memory leak: 25.95 B/s (using 92 data points, chi2=0.20)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,331 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | ..............................
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . Timing measurements:
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . get job = 0 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . initial setup = 35 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . payload setup = 42 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . stage-in = 0 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . payload execution = 6071 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . stage-out = 2 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | . log creation = 0 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,332 | INFO     | ..............................
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | 
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | job summary report
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | --------------------------------------------------
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | PanDA job id: 7038516580
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | task id: 48955010
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | errors: (none)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | pilot state: finished 
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | transexitcode: 0
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | exeerrorcode: 0
[2026-03-04 15:49:46] 2026-03-04 20:48:34,447 | INFO     | exeerrordiag: 
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | exitcode: 0
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | exitmsg: OK
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | cpuconsumptiontime: 20852 s
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | nevents: 400
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | neventsw: 0
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | pid: 3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | pgrp: 3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | corecount: 8
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | event service: False
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | sizes: {0: 2295313, 1: 2295774, 6117: 2322515, 6118: 2322514, 6121: 2331624, 6124: 2331790}
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | --------------------------------------------------
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | 
[2026-03-04 15:49:46] 2026-03-04 20:48:34,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,583 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 15:49:46] 2026-03-04 20:48:34,589 | INFO     | job 7038516580 has completed (purged errors)
[2026-03-04 15:49:46] 2026-03-04 20:48:34,589 | INFO     | overall cleanup function is called
[2026-03-04 15:49:46] 2026-03-04 20:48:35,600 | INFO     | --- collectZombieJob: --- 10, [3571729]
[2026-03-04 15:49:46] 2026-03-04 20:48:35,600 | INFO     | zombie collector waiting for pid 3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:35,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 15:49:46] 2026-03-04 20:48:35,600 | INFO     | collected zombie processes
[2026-03-04 15:49:46] 2026-03-04 20:48:35,600 | INFO     | will attempt to kill all subprocesses of pid=3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:37,262 | INFO     | process IDs to be killed: [3571729] (in reverse order)
[2026-03-04 15:49:46] 2026-03-04 20:48:37,567 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 15:49:46] 2026-03-04 20:48:37,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 15:49:46] 2026-03-04 20:48:37,686 | INFO     | did not find any defunct processes belonging to 3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:37,799 | INFO     | did not find any defunct processes belonging to 3571729
[2026-03-04 15:49:46] 2026-03-04 20:48:37,799 | INFO     | ready for new job
[2026-03-04 15:49:46] 2026-03-04 20:48:37,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 15:49:46] 2026-03-04 20:48:37,809 | INFO     | **************************************
[2026-03-04 15:49:46] 2026-03-04 20:48:37,809 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 15:49:46] 2026-03-04 20:48:37,809 | INFO     | **************************************
[2026-03-04 15:49:46] 2026-03-04 20:48:37,809 | INFO     | 
[2026-03-04 15:49:46] 2026-03-04 20:48:37,837 | INFO     | architecture information:
[2026-03-04 15:49:46] 2026-03-04 20:48:37,841 | INFO     | executing command: cat /etc/os-release
[2026-03-04 15:49:46] 2026-03-04 20:48:37,946 | INFO     | cat /etc/os-release:
[2026-03-04 15:49:46] NAME="CentOS Linux"
[2026-03-04 15:49:46] VERSION="7 (Core)"
[2026-03-04 15:49:46] ID="centos"
[2026-03-04 15:49:46] ID_LIKE="rhel fedora"
[2026-03-04 15:49:46] VERSION_ID="7"
[2026-03-04 15:49:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 15:49:46] ANSI_COLOR="0;31"
[2026-03-04 15:49:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 15:49:46] HOME_URL="https://www.centos.org/"
[2026-03-04 15:49:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 15:49:46] 
[2026-03-04 15:49:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 15:49:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 15:49:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 15:49:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 15:49:46] 
[2026-03-04 15:49:46] 2026-03-04 20:48:37,947 | INFO     | **************************************
[2026-03-04 15:49:46] 2026-03-04 20:48:38,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 15:49:46] 2026-03-04 20:48:38,534 | INFO     | sufficient remaining disk space (168931885056 B)
[2026-03-04 15:49:46] 2026-03-04 20:48:38,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 15:49:46] 2026-03-04 20:48:38,535 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 15:49:46] 2026-03-04 20:48:38,535 | INFO     | update_server=False
[2026-03-04 15:49:46] 2026-03-04 20:48:38,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 15:49:46] 2026-03-04 20:48:38,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 15:49:46] 2026-03-04 20:48:38,908 | INFO     | all job control threads have been joined
[2026-03-04 15:49:46] 2026-03-04 20:48:39,107 | INFO     | all data control threads have been joined
[2026-03-04 15:49:46] 2026-03-04 20:48:39,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 15:49:46] 2026-03-04 20:48:39,448 | INFO     | aborting loop
[2026-03-04 15:49:46] 2026-03-04 20:48:39,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 15:49:46] 2026-03-04 20:48:39,541 | INFO     | [job] retrieve thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:39,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 15:49:46] 2026-03-04 20:48:39,582 | INFO     | [payload] validate_post thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:39,688 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:39,915 | INFO     | [job] control thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,031 | INFO     | all payload control threads have been joined
[2026-03-04 15:49:46] 2026-03-04 20:48:40,114 | INFO     | [data] control thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,133 | INFO     | [data] copytool_in thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,180 | INFO     | [payload] failed_post thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,454 | INFO     | [job] job monitor thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,485 | INFO     | [job] queue monitor thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,697 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,957 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,978 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:40,978 | INFO     | [job] validate thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:41,037 | INFO     | [payload] control thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:41,573 | INFO     | [data] copytool_out thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:48:42,563 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 15:49:46] 2026-03-04 20:49:08,676 | INFO     | PID=3552772 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 15:49:46] 2026-03-04 20:49:08,676 | INFO     | .. there are 36 such processes running
[2026-03-04 15:49:46] 2026-03-04 20:49:08,688 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 15:49:46] 2026-03-04 20:49:08,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 15:49:46] 2026-03-04 20:49:08,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 15:49:46] 2026-03-04 20:49:38,377 | INFO     | [monitor] cgroup control has ended
[2026-03-04 15:49:46] 2026-03-04 20:49:38,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587927836480)>', '<ExcThread(monitor, started 140587550365440)>']
[2026-03-04 15:49:46] 2026-03-04 20:49:39,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 15:49:46] 2026-03-04 20:49:39,902 | INFO     | [monitor] control thread has ended
[2026-03-04 15:49:46] 2026-03-04 20:49:43,971 | INFO     | all workflow threads have been joined
[2026-03-04 15:49:46] 2026-03-04 20:49:43,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 15:49:46] 2026-03-04 20:49:43,971 | INFO     | traces error code: 0
[2026-03-04 15:49:46] 2026-03-04 20:49:43,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 15:49:46] 2026-03-04 20:49:44,657 [wrapper] ==== pilot stdout END ====
[2026-03-04 15:49:46] 2026-03-04 20:49:44,684 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 15:49:46] 2026-03-04 20:49:44,716 [wrapper] pilotpid: 3552772
[2026-03-04 15:49:46] 2026-03-04 20:49:44,738 [wrapper] Pilot exit status: 0
[2026-03-04 15:49:46] 2026-03-04 20:49:44,847 [wrapper] pandaids: 7038516580
[2026-03-04 15:49:46] 2026-03-04 20:49:45,489 [wrapper] cleanup supervisor_pilot 3892996 3552773
[2026-03-04 15:49:46] 2026-03-04 20:49:45,512 [wrapper] Test setup, not cleaning
[2026-03-04 15:49:46] 2026-03-04 20:49:45,543 [wrapper] apfmon messages muted
[2026-03-04 15:49:46] 2026-03-04 20:49:45,564 [wrapper] ==== wrapper stdout END ====
[2026-03-04 15:49:46] 2026-03-04 20:49:45,591 [wrapper] ==== wrapper stderr END ====
[2026-03-04 15:49:46]  *** Error codes and diagnostics ***
[2026-03-04 15:49:46]     "exeErrorCode": 0,
[2026-03-04 15:49:46]     "exeErrorDiag": "",
[2026-03-04 15:49:46]     "pilotErrorCode": 0,
[2026-03-04 15:49:46]     "pilotErrorDiag": "",
[2026-03-04 15:49:46]  *** Listing of results directory ***
[2026-03-04 15:49:46] total 613932
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 11:22 pilot3.tar.gz
[2026-03-04 15:49:46] -rwx------. 1 boincer umatlas     36322 Mar  4 11:24 runpilot2-wrapper.sh
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 11:24 queuedata.json
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas       100 Mar  4 14:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 15:49:46] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  4 14:04 run_atlas
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas       105 Mar  4 14:04 job.xml
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas 436930014 Mar  4 14:04 EVNT.46701403._001046.pool.root.1
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 14:04 start_atlas.sh
[2026-03-04 15:49:46] drwxrwx--x. 2 boincer umatlas      4096 Mar  4 14:04 shared
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas    597941 Mar  4 14:04 input.tar.gz
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas         0 Mar  4 14:04 boinc_lockfile
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas      2559 Mar  4 14:04 pandaJob.out
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas        57 Mar  4 14:04 setup.sh.local
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas    997757 Mar  4 14:05 agis_schedconf.cvmfs.json
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas   1521291 Mar  4 14:05 agis_ddmendpoints.agis.ALL.json
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas       431 Mar  4 14:06 workernode_map.json
[2026-03-04 15:49:46] drwx------. 5 boincer umatlas      4096 Mar  4 14:06 pilot3
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas 185499876 Mar  4 15:47 HITS.48955010._002262.pool.root.1
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas       530 Mar  4 15:47 boinc_task_state.xml
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas      1042 Mar  4 15:48 memory_monitor_summary.json
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas    342142 Mar  4 15:48 log.48955010._002262.job.log.tgz.1
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas      6352 Mar  4 15:48 heartbeat.json
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas        95 Mar  4 15:49 pilot_heartbeat.json
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas      7185 Mar  4 15:49 init_data.xml
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas        27 Mar  4 15:49 wrapper_checkpoint.txt
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas      8192 Mar  4 15:49 boinc_mmap_file
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas      4821 Mar  4 15:49 pilotlog.txt
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas    804728 Mar  4 15:49 log.48955010._002262.job.log.1
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas       357 Mar  4 15:49 output.list
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas       620 Mar  4 15:49 runtime_log
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas   1167360 Mar  4 15:49 result.tar.gz
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas      9341 Mar  4 15:49 runtime_log.err
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas       656 Mar  4 15:49 gOhKDmFC4H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwtKLDmT0fqVo.diag
[2026-03-04 15:49:46] -rw-r--r--. 1 boincer umatlas     22142 Mar  4 15:49 stderr.txt
[2026-03-04 15:49:46] HITS file was successfully produced:
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas 185499876 Mar  4 15:47 shared/HITS.pool.root.1
[2026-03-04 15:49:46]  *** Contents of shared directory: ***
[2026-03-04 15:49:46] total 609592
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas 436930014 Mar  4 14:04 ATLAS.root_0
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 14:04 start_atlas.sh
[2026-03-04 15:49:46] -rw-r--r--. 2 boincer umatlas    597941 Mar  4 14:04 input.tar.gz
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas 185499876 Mar  4 15:47 HITS.pool.root.1
[2026-03-04 15:49:46] -rw-------. 1 boincer umatlas   1167360 Mar  4 15:49 result.tar.gz
15:49:47 (3545833): run_atlas exited; CPU time 21037.361109
15:49:47 (3545833): called boinc_finish(0)

</stderr_txt>
]]>

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