Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
14:32:47 (672878): wrapper (7.7.26015): starting
14:32:47 (672878): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 14:32:47] Arguments: --nthreads 4
[2026-03-04 14:32:47] Threads: 4
[2026-03-04 14:32:47] Checking for CVMFS
[2026-03-04 14:32:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 14:32:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 14:32:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 14:32:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 14:32:48] 2.13.3.0 2422122 6178 51308 156887 3 188 2377469 4096000 1832 130560 0 4099324 99.989 210220 979 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-04 14:32:48] CVMFS is ok
[2026-03-04 14:32:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 14:32:48] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-04 14:32:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-04 14:32:48] Further information can be found at the LHC@home message board.
[2026-03-04 14:32:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 14:32:48] Checking for apptainer binary...
[2026-03-04 14:32:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 14:32:48] Running /usr/bin/apptainer --version
[2026-03-04 14:32:48] apptainer version 1.4.5
[2026-03-04 14:32:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 14:32:48] OptiPlex7070-Ubuntu
[2026-03-04 14:32:48] apptainer works
[2026-03-04 14:32:48] Set ATHENA_PROC_NUMBER=4
[2026-03-04 14:32:48] Set ATHENA_CORE_NUMBER=4
[2026-03-04 14:32:48] Starting ATLAS job with PandaID=7039656109
[2026-03-04 14:32:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 16:59:33]  *** The last 200 lines of the pilot log: ***
[2026-03-04 16:59:33] 2026-03-04 21:59:00,579 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,579 | INFO     | log transfer has been attempted: DONE
[2026-03-04 16:59:33] 2026-03-04 21:59:00,579 | INFO     | job 7039656109 has finished - writing final server update
[2026-03-04 16:59:33] 2026-03-04 21:59:00,579 | INFO     | total number of processed events: 400 (read)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,582 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/2/PanDA_Pilot-7039656109/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,582 | INFO     | extracted standard info from prmon json
[2026-03-04 16:59:33] 2026-03-04 21:59:00,582 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 16:59:33] 2026-03-04 21:59:00,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 16:59:33] 2026-03-04 21:59:00,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 16:59:33] 2026-03-04 21:59:00,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 16:59:33] 2026-03-04 21:59:00,585 | INFO     | fitting pss+swap vs Time
[2026-03-04 16:59:33] 2026-03-04 21:59:00,585 | INFO     | sum of square deviations: 925859220.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,586 | INFO     | sum of deviations: 8420458971.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,586 | INFO     | mean x: 1772657161.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,586 | INFO     | mean y: 2292503.125
[2026-03-04 16:59:33] 2026-03-04 21:59:00,586 | INFO     | intersect: -16119582805.3696
[2026-03-04 16:59:33] 2026-03-04 21:59:00,586 | INFO     | chi2: 2.013972092683751
[2026-03-04 16:59:33] 2026-03-04 21:59:00,587 | INFO     | sum of square deviations: 832722590.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,587 | INFO     | sum of deviations: 16076596969.999996
[2026-03-04 16:59:33] 2026-03-04 21:59:00,587 | INFO     | mean x: 1772657009.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,587 | INFO     | mean y: 2304659.9712230214
[2026-03-04 16:59:33] 2026-03-04 21:59:00,587 | INFO     | intersect: -34220727886.4842
[2026-03-04 16:59:33] 2026-03-04 21:59:00,588 | INFO     | chi2: 1.3504649630188996
[2026-03-04 16:59:33] 2026-03-04 21:59:00,588 | INFO     | current chi2=1.3504649630188996 (change=32.94519979076196 %)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,588 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | sum of deviations: 15427257856.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | mean x: 1772656856.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | mean y: 2303517.962686567
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | intersect: -36653671980.71376
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | chi2: 1.3520964041713248
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | current chi2=1.3520964041713248 (change=-0.12080588516552007 %)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | right removable region: 133
[2026-03-04 16:59:33] 2026-03-04 21:59:00,589 | INFO     | sum of square deviations: 832722590.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,590 | INFO     | sum of deviations: -8692854715.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,590 | INFO     | mean x: 1772657314.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,590 | INFO     | mean y: 2319967.323741007
[2026-03-04 16:59:33] 2026-03-04 21:59:00,590 | INFO     | intersect: 18507225052.32226
[2026-03-04 16:59:33] 2026-03-04 21:59:00,591 | INFO     | chi2: 0.6983362654505229
[2026-03-04 16:59:33] 2026-03-04 21:59:00,591 | INFO     | current chi2=0.6983362654505229 (change=65.32542491589626 %)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,591 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,591 | INFO     | sum of deviations: -6494435241.499999
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | mean x: 1772657466.5
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | mean y: 2316090.9776119404
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | intersect: 15433440871.855274
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | chi2: 0.6916905539001494
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | current chi2=0.6916905539001494 (change=0.9516492095804326 %)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | left removable region: 20
[2026-03-04 16:59:33] 2026-03-04 21:59:00,592 | INFO     | sum of square deviations: 447383272.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | sum of deviations: 592862172.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | mean x: 1772657436.0
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | mean y: 2330905.274336283
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | intersect: -2346754551.1861615
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | chi2: 0.0007277406862942643
[2026-03-04 16:59:33] 2026-03-04 21:59:00,593 | INFO     | current memory leak: 1.33 B/s (using 113 data points, chi2=0.00)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | could have reported an average CPU frequency of 3424 MHz (8 samples)
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | ..............................
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . Timing measurements:
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . get job = 0 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . initial setup = 5 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . payload setup = 3 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . stage-in = 0 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . payload execution = 8732 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,594 | INFO     | . stage-out = 0 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,595 | INFO     | . log creation = 0 s
[2026-03-04 16:59:33] 2026-03-04 21:59:00,595 | INFO     | ..............................
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | 
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | job summary report
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | --------------------------------------------------
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | PanDA job id: 7039656109
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | task id: 48868979
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | errors: (none)
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | pilot state: finished 
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | transexitcode: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | exeerrorcode: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:01,065 | INFO     | exeerrordiag: 
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | exitcode: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | exitmsg: OK
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | cpuconsumptiontime: 33970 s
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | nevents: 400
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | neventsw: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | pid: 681576
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | pgrp: 681576
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | corecount: 4
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | event service: False
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | sizes: {0: 2295757, 11: 2295757, 8739: 2324055, 8741: 2333081, 8744: 2333137, 8747: 2333331}
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | --------------------------------------------------
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | 
[2026-03-04 16:59:33] 2026-03-04 21:59:01,066 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-04 16:59:33] 2026-03-04 21:59:01,082 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | job 7039656109 has completed (purged errors)
[2026-03-04 16:59:33] 2026-03-04 21:59:01,084 | INFO     | overall cleanup function is called
[2026-03-04 16:59:33] 2026-03-04 21:59:02,091 | INFO     | --- collectZombieJob: --- 10, [681576]
[2026-03-04 16:59:33] 2026-03-04 21:59:02,091 | INFO     | zombie collector waiting for pid 681576
[2026-03-04 16:59:33] 2026-03-04 21:59:02,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 16:59:33] 2026-03-04 21:59:02,091 | INFO     | collected zombie processes
[2026-03-04 16:59:33] 2026-03-04 21:59:02,091 | INFO     | will attempt to kill all subprocesses of pid=681576
[2026-03-04 16:59:33] 2026-03-04 21:59:02,234 | INFO     | process IDs to be killed: [681576] (in reverse order)
[2026-03-04 16:59:33] 2026-03-04 21:59:02,272 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 16:59:33] 2026-03-04 21:59:02,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 16:59:33] 2026-03-04 21:59:02,275 | INFO     | did not find any defunct processes belonging to 681576
[2026-03-04 16:59:33] 2026-03-04 21:59:02,278 | INFO     | did not find any defunct processes belonging to 681576
[2026-03-04 16:59:33] 2026-03-04 21:59:02,278 | INFO     | ready for new job
[2026-03-04 16:59:33] 2026-03-04 21:59:02,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 16:59:33] 2026-03-04 21:59:02,279 | INFO     | **************************************
[2026-03-04 16:59:33] 2026-03-04 21:59:02,279 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 16:59:33] 2026-03-04 21:59:02,280 | INFO     | **************************************
[2026-03-04 16:59:33] 2026-03-04 21:59:02,280 | INFO     | 
[2026-03-04 16:59:33] 2026-03-04 21:59:02,280 | INFO     | architecture information:
[2026-03-04 16:59:33] 2026-03-04 21:59:02,281 | INFO     | executing command: cat /etc/os-release
[2026-03-04 16:59:33] 2026-03-04 21:59:02,291 | INFO     | cat /etc/os-release:
[2026-03-04 16:59:33] NAME="CentOS Linux"
[2026-03-04 16:59:33] VERSION="7 (Core)"
[2026-03-04 16:59:33] ID="centos"
[2026-03-04 16:59:33] ID_LIKE="rhel fedora"
[2026-03-04 16:59:33] VERSION_ID="7"
[2026-03-04 16:59:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 16:59:33] ANSI_COLOR="0;31"
[2026-03-04 16:59:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 16:59:33] HOME_URL="https://www.centos.org/"
[2026-03-04 16:59:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 16:59:33] 
[2026-03-04 16:59:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 16:59:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 16:59:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 16:59:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 16:59:33] 
[2026-03-04 16:59:33] 2026-03-04 21:59:02,291 | INFO     | **************************************
[2026-03-04 16:59:33] 2026-03-04 21:59:02,794 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/2
[2026-03-04 16:59:33] 2026-03-04 21:59:02,804 | INFO     | sufficient remaining disk space (412734193664 B)
[2026-03-04 16:59:33] 2026-03-04 21:59:02,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 16:59:33] 2026-03-04 21:59:02,804 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 16:59:33] 2026-03-04 21:59:02,805 | INFO     | update_server=False
[2026-03-04 16:59:33] 2026-03-04 21:59:02,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 16:59:33] 2026-03-04 21:59:03,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 16:59:33] 2026-03-04 21:59:03,207 | INFO     | all payload control threads have been joined
[2026-03-04 16:59:33] 2026-03-04 21:59:03,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 16:59:33] 2026-03-04 21:59:03,376 | INFO     | aborting loop
[2026-03-04 16:59:33] 2026-03-04 21:59:03,810 | INFO     | [job] retrieve thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:03,863 | INFO     | all job control threads have been joined
[2026-03-04 16:59:33] 2026-03-04 21:59:03,882 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:03,883 | INFO     | all data control threads have been joined
[2026-03-04 16:59:33] 2026-03-04 21:59:03,887 | INFO     | [payload] validate_post thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:03,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 16:59:33] 2026-03-04 21:59:03,987 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,031 | INFO     | [payload] failed_post thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,141 | INFO     | [data] copytool_in thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,212 | INFO     | [payload] control thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,381 | INFO     | [job] job monitor thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,679 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,868 | INFO     | [job] control thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:04,888 | INFO     | [data] control thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:05,115 | INFO     | [job] validate thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:05,160 | INFO     | [data] copytool_out thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:05,297 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:05,673 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 16:59:33] 2026-03-04 21:59:06,678 | INFO     | [job] queue monitor thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:07,984 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 16:59:33] 2026-03-04 21:59:16,395 | INFO     | [monitor] cgroup control has ended
[2026-03-04 16:59:33] 2026-03-04 21:59:18,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124448618395456)>', '<ExcThread(monitor, started 124448111830784)>']
[2026-03-04 16:59:33] 2026-03-04 21:59:23,280 | INFO     | all workflow threads have been joined
[2026-03-04 16:59:33] 2026-03-04 21:59:23,280 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 16:59:33] 2026-03-04 21:59:23,280 | INFO     | traces error code: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:23,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 16:59:33] 2026-03-04 21:59:33,694 | INFO     | PID=677059 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 16:59:33] 2026-03-04 21:59:33,694 | INFO     | .. there are 3 such processes running
[2026-03-04 16:59:33] 2026-03-04 21:59:33,694 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 16:59:33] 2026-03-04 21:59:33,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 16:59:33] 2026-03-04 21:59:33,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 16:59:33] 2026-03-04 21:59:33,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 16:59:33] 2026-03-04 21:59:33,695 | INFO     | [monitor] control thread has ended
[2026-03-04 16:59:33] 2026-03-04 21:59:33,770 [wrapper] ==== pilot stdout END ====
[2026-03-04 16:59:33] 2026-03-04 21:59:33,772 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 16:59:33] 2026-03-04 21:59:33,774 [wrapper] pilotpid: 677059
[2026-03-04 16:59:33] 2026-03-04 21:59:33,775 [wrapper] Pilot exit status: 0
[2026-03-04 16:59:33] 2026-03-04 21:59:33,781 [wrapper] pandaids: 7039656109
[2026-03-04 16:59:33] 2026-03-04 21:59:33,803 [wrapper] cleanup supervisor_pilot  723622 677060
[2026-03-04 16:59:33] 2026-03-04 21:59:33,805 [wrapper] Test setup, not cleaning
[2026-03-04 16:59:33] 2026-03-04 21:59:33,807 [wrapper] apfmon messages muted
[2026-03-04 16:59:33] 2026-03-04 21:59:33,808 [wrapper] ==== wrapper stdout END ====
[2026-03-04 16:59:33] 2026-03-04 21:59:33,810 [wrapper] ==== wrapper stderr END ====
[2026-03-04 16:59:33]  *** Error codes and diagnostics ***
[2026-03-04 16:59:33]     "exeErrorCode": 0,
[2026-03-04 16:59:33]     "exeErrorDiag": "",
[2026-03-04 16:59:33]     "pilotErrorCode": 0,
[2026-03-04 16:59:33]     "pilotErrorDiag": "",
[2026-03-04 16:59:33]  *** Listing of results directory ***
[2026-03-04 16:59:33] total 494488
[2026-03-04 16:59:33] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  4 06:53 pilot3.tar.gz
[2026-03-04 16:59:33] -rwx------ 1 whitlerd whitlerd     36322 Mar  4 06:54 runpilot2-wrapper.sh
[2026-03-04 16:59:33] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  4 06:55 queuedata.json
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  4 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 16:59:33] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  4 14:32 run_atlas
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  4 14:32 job.xml
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd 292530694 Mar  4 14:32 EVNT.48717036._000030.pool.root.1
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  4 14:32 start_atlas.sh
[2026-03-04 16:59:33] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  4 14:32 shared
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd    597974 Mar  4 14:32 input.tar.gz
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  4 14:32 boinc_setup_complete
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd      6467 Mar  4 14:32 init_data.xml
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  4 14:32 boinc_lockfile
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd      2594 Mar  4 14:32 pandaJob.out
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd    997757 Mar  4 14:32 agis_schedconf.cvmfs.json
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd   1521291 Mar  4 14:32 agis_ddmendpoints.agis.ALL.json
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd       432 Mar  4 14:33 workernode_map.json
[2026-03-04 16:59:33] drwx------ 5 whitlerd whitlerd      4096 Mar  4 14:33 pilot3
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar  4 16:58 boinc_task_state.xml
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd 206693020 Mar  4 16:58 HITS.48868979._001570.pool.root.1
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd      1030 Mar  4 16:58 memory_monitor_summary.json
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd    315734 Mar  4 16:58 log.48868979._001570.job.log.tgz.1
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd      6350 Mar  4 16:59 heartbeat.json
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  4 16:59 wrapper_checkpoint.txt
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  4 16:59 boinc_mmap_file
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd        95 Mar  4 16:59 pilot_heartbeat.json
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd       821 Mar  4 16:59 pilotlog.txt
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd   1285948 Mar  4 16:59 log.48868979._001570.job.log.1
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd       357 Mar  4 16:59 output.list
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  4 16:59 runtime_log
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd   1617920 Mar  4 16:59 result.tar.gz
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd      9054 Mar  4 16:59 runtime_log.err
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd       658 Mar  4 16:59 1f5MDmJzzH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtIKLDmPd8Z2m.diag
[2026-03-04 16:59:33] -rw-rw-r-- 1 whitlerd whitlerd     21127 Mar  4 16:59 stderr.txt
[2026-03-04 16:59:33] HITS file was successfully produced:
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd 206693020 Mar  4 16:58 shared/HITS.pool.root.1
[2026-03-04 16:59:33]  *** Contents of shared directory: ***
[2026-03-04 16:59:33] total 489712
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd 292530694 Mar  4 14:32 ATLAS.root_0
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  4 14:32 start_atlas.sh
[2026-03-04 16:59:33] -rw-r--r-- 2 whitlerd whitlerd    597974 Mar  4 14:32 input.tar.gz
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd 206693020 Mar  4 16:58 HITS.pool.root.1
[2026-03-04 16:59:33] -rw------- 1 whitlerd whitlerd   1617920 Mar  4 16:59 result.tar.gz
16:59:35 (672878): run_atlas exited; CPU time 34121.054174
16:59:35 (672878): called boinc_finish(0)

</stderr_txt>
]]>

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