Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:40:29 (3530306): wrapper (7.7.26015): starting
19:40:29 (3530306): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 19:40:29] Arguments: --nthreads 4
[2026-03-07 19:40:29] Threads: 4
[2026-03-07 19:40:29] Checking for CVMFS
[2026-03-07 19:40:29] No cvmfs_config command found, will try listing directly
[2026-03-07 19:40:29] CVMFS is ok
[2026-03-07 19:40:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 19:40:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 19:40:29] Further information can be found at the LHC@home message board.
[2026-03-07 19:40:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:40:29] Checking for apptainer binary...
[2026-03-07 19:40:29] which: no apptainer in ((null))
[2026-03-07 19:40:29] apptainer is not installed, using version from CVMFS
[2026-03-07 19:40:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:40:29] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-07 19:40:29] apptainer works
[2026-03-07 19:40:30] Set ATHENA_PROC_NUMBER=4
[2026-03-07 19:40:30] Set ATHENA_CORE_NUMBER=4
[2026-03-07 19:40:30] Starting ATLAS job with PandaID=7040460831
[2026-03-07 19:40:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 21:22:00]  *** The last 200 lines of the pilot log: ***
[2026-03-07 21:22:01]  mtime=0
[2026-03-07 21:22:01]  protocol_id=None
[2026-03-07 21:22:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 21:22:01]  replicas=None
[2026-03-07 21:22:01]  scope=mc23_13p6TeV
[2026-03-07 21:22:01]  status=None
[2026-03-07 21:22:01]  status_code=0
[2026-03-07 21:22:01]  storage_token=
[2026-03-07 21:22:01]  surl=/var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/log.48958627._000119.job.log.tgz.1
[2026-03-07 21:22:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/8c/log.48958627._000119.job.log.tgz.1
[2026-03-07 21:22:01]  workdir=None
[2026-03-07 21:22:01] ]
[2026-03-07 21:22:01] 2026-03-07 20:20:59,821 | INFO     | transferring file log.48958627._000119.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/log.48958627._000119.job.log.tgz.1 to /var/lib/b
[2026-03-07 21:22:01] 2026-03-07 20:20:59,821 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/log.48958627._000119.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/4/lo
[2026-03-07 21:22:01] 2026-03-07 20:20:59,839 | INFO     | adding to output.list: log.48958627._000119.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/8c/log.48958627._000119.job.log.tg
[2026-03-07 21:22:01] 2026-03-07 20:20:59,840 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 21:22:01] 2026-03-07 20:20:59,840 | INFO     | summary of transferred files:
[2026-03-07 21:22:01] 2026-03-07 20:20:59,840 | INFO     |  -- lfn=log.48958627._000119.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 21:22:01] 2026-03-07 20:20:59,840 | INFO     | stage-out finished correctly
[2026-03-07 21:22:01] 2026-03-07 20:21:00,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 21:22:01] 2026-03-07 20:21:01,273 | INFO     | time since job start (6016s) is within the limit (349056.0s)
[2026-03-07 21:22:01] 2026-03-07 20:21:01,558 | INFO     | job 7040460831 has state=finished
[2026-03-07 21:22:01] 2026-03-07 20:21:01,559 | INFO     | preparing for final server update for job 7040460831 in state='finished'
[2026-03-07 21:22:01] 2026-03-07 20:21:01,824 | WARNING  | process 3541035 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 21:22:01] 2026-03-07 20:21:01,824 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,142 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,142 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/jobReport.json
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/4/workernode_map.json
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | this job has now completed (state=finished)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | log transfer has been attempted: DONE
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | job 7040460831 has finished - writing final server update
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1578906/.job.ad'
[2026-03-07 21:22:01] 2026-03-07 20:21:02,144 | INFO     | total number of processed events: 400 (read)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,171 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7040460831/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,172 | INFO     | extracted standard info from prmon json
[2026-03-07 21:22:01] 2026-03-07 20:21:02,172 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 21:22:01] 2026-03-07 20:21:02,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 21:22:01] 2026-03-07 20:21:02,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 21:22:01] 2026-03-07 20:21:02,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | fitting pss+swap vs Time
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | sum of square deviations: 241429643.0
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | sum of deviations: 656569687.4999999
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | mean x: 1772911947.5
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | mean y: 2346925.8586956523
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | intersect: -4819100137.852081
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | chi2: 0.00044239724228145767
[2026-03-07 21:22:01] 2026-03-07 20:21:02,174 | INFO     | current memory leak: 2.72 B/s (using 92 data points, chi2=0.00)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | could have reported an average CPU frequency of 3563 MHz (7 samples)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | ..............................
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . Timing measurements:
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . get job = 0 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . initial setup = 7 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . payload setup = 5 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . stage-in = 0 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . payload execution = 5992 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . stage-out = 0 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | . log creation = 0 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,175 | INFO     | ..............................
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | 
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | job summary report
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | --------------------------------------------------
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | PanDA job id: 7040460831
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | task id: 48958627
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | errors: (none)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | pilot state: finished 
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | transexitcode: 0
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | exeerrorcode: 0
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | exeerrordiag: 
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | exitcode: 0
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | exitmsg: OK
[2026-03-07 21:22:01] 2026-03-07 20:21:02,224 | INFO     | cpuconsumptiontime: 22941 s
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | nevents: 400
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | neventsw: 0
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | pid: 3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | pgrp: 3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | corecount: 4
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | event service: False
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | sizes: {0: 2295492, 1: 2295754, 11: 2295782, 6002: 2322582, 6004: 2331658, 6006: 2331796}
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | --------------------------------------------------
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | 
[2026-03-07 21:22:01] 2026-03-07 20:21:02,225 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | job 7040460831 has completed (purged errors)
[2026-03-07 21:22:01] 2026-03-07 20:21:02,243 | INFO     | overall cleanup function is called
[2026-03-07 21:22:01] 2026-03-07 20:21:02,369 | INFO     | number of running child processes to parent process 3541035: 1
[2026-03-07 21:22:01] 2026-03-07 20:21:02,369 | INFO     | maximum number of monitored processes: 6
[2026-03-07 21:22:01] 2026-03-07 20:21:02,369 | INFO     | aborting job monitoring since job object (job id=7040460831) has expired
[2026-03-07 21:22:01] 2026-03-07 20:21:03,252 | INFO     | --- collectZombieJob: --- 10, [3541035]
[2026-03-07 21:22:01] 2026-03-07 20:21:03,252 | INFO     | zombie collector waiting for pid 3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:03,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 21:22:01] 2026-03-07 20:21:03,252 | INFO     | collected zombie processes
[2026-03-07 21:22:01] 2026-03-07 20:21:03,252 | INFO     | will attempt to kill all subprocesses of pid=3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:03,701 | INFO     | process IDs to be killed: [3541035] (in reverse order)
[2026-03-07 21:22:01] 2026-03-07 20:21:03,914 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 21:22:01] 2026-03-07 20:21:03,914 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 21:22:01] 2026-03-07 20:21:03,942 | INFO     | did not find any defunct processes belonging to 3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:03,971 | INFO     | did not find any defunct processes belonging to 3541035
[2026-03-07 21:22:01] 2026-03-07 20:21:03,971 | INFO     | ready for new job
[2026-03-07 21:22:01] 2026-03-07 20:21:03,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 21:22:01] 2026-03-07 20:21:03,973 | INFO     | **************************************
[2026-03-07 21:22:01] 2026-03-07 20:21:03,973 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 21:22:01] 2026-03-07 20:21:03,973 | INFO     | **************************************
[2026-03-07 21:22:01] 2026-03-07 20:21:03,973 | INFO     | 
[2026-03-07 21:22:01] 2026-03-07 20:21:03,980 | INFO     | architecture information:
[2026-03-07 21:22:01] 2026-03-07 20:21:03,980 | INFO     | executing command: cat /etc/os-release
[2026-03-07 21:22:01] 2026-03-07 20:21:03,995 | INFO     | cat /etc/os-release:
[2026-03-07 21:22:01] NAME="CentOS Linux"
[2026-03-07 21:22:01] VERSION="7 (Core)"
[2026-03-07 21:22:01] ID="centos"
[2026-03-07 21:22:01] ID_LIKE="rhel fedora"
[2026-03-07 21:22:01] VERSION_ID="7"
[2026-03-07 21:22:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 21:22:01] ANSI_COLOR="0;31"
[2026-03-07 21:22:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 21:22:01] HOME_URL="https://www.centos.org/"
[2026-03-07 21:22:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 21:22:01] 
[2026-03-07 21:22:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 21:22:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 21:22:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 21:22:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 21:22:01] 
[2026-03-07 21:22:01] 2026-03-07 20:21:03,995 | INFO     | **************************************
[2026-03-07 21:22:01] 2026-03-07 20:21:04,497 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-03-07 21:22:01] 2026-03-07 20:21:04,511 | INFO     | sufficient remaining disk space (20696793088 B)
[2026-03-07 21:22:01] 2026-03-07 20:21:04,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 21:22:01] 2026-03-07 20:21:04,512 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 21:22:01] 2026-03-07 20:21:04,512 | INFO     | update_server=False
[2026-03-07 21:22:01] 2026-03-07 20:21:04,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 21:22:01] 2026-03-07 20:21:04,872 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 21:22:01] 2026-03-07 20:21:04,872 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 21:22:01] 2026-03-07 20:21:04,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:22:01] 2026-03-07 20:21:04,872 | INFO     | will abort loop
[2026-03-07 21:22:01] 2026-03-07 20:21:04,972 | INFO     | all job control threads have been joined
[2026-03-07 21:22:01] 2026-03-07 20:21:05,131 | INFO     | all data control threads have been joined
[2026-03-07 21:22:01] 2026-03-07 20:21:05,230 | INFO     | all payload control threads have been joined
[2026-03-07 21:22:01] 2026-03-07 20:21:05,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 21:22:01] 2026-03-07 20:21:05,517 | INFO     | [job] retrieve thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:05,775 | INFO     | [payload] validate_post thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:05,877 | INFO     | [job] job monitor thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:05,977 | INFO     | [job] control thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,066 | INFO     | [job] validate thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,136 | INFO     | [data] control thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,180 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,235 | INFO     | [payload] control thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,318 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,345 | INFO     | [payload] failed_post thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 21:22:01] 2026-03-07 20:21:06,528 | INFO     | [data] copytool_in thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:06,820 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:07,235 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:22:01] 2026-03-07 20:21:07,404 | INFO     | [data] copytool_out thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:08,240 | INFO     | [job] queue monitor thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:10,493 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:15,070 | INFO     | job.realtimelogging is not enabled
[2026-03-07 21:22:01] 2026-03-07 20:21:16,075 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 21:22:01] 2026-03-07 20:21:34,871 | INFO     | PID=3534958 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 21:22:01] 2026-03-07 20:21:34,871 | INFO     | .. there are 54 such processes running
[2026-03-07 21:22:01] 2026-03-07 20:21:34,871 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 21:22:01] 2026-03-07 20:21:34,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 21:22:01] 2026-03-07 20:21:34,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 21:22:01] 2026-03-07 20:21:54,915 | INFO     | [monitor] cgroup control has ended
[2026-03-07 21:22:01] 2026-03-07 20:21:55,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22757021366080)>', '<ExcThread(monitor, started 22756780680960)>']
[2026-03-07 21:22:01] 2026-03-07 20:21:55,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 21:22:01] 2026-03-07 20:21:55,975 | INFO     | [monitor] control thread has ended
[2026-03-07 21:22:01] 2026-03-07 20:22:00,688 | INFO     | all workflow threads have been joined
[2026-03-07 21:22:01] 2026-03-07 20:22:00,688 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 21:22:01] 2026-03-07 20:22:00,688 | INFO     | traces error code: 0
[2026-03-07 21:22:01] 2026-03-07 20:22:00,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 21:22:01] 2026-03-07 20:22:00,812 [wrapper] ==== pilot stdout END ====
[2026-03-07 21:22:01] 2026-03-07 20:22:00,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 21:22:01] 2026-03-07 20:22:00,815 [wrapper] pilotpid: 3534958
[2026-03-07 21:22:01] 2026-03-07 20:22:00,817 [wrapper] Pilot exit status: 0
[2026-03-07 21:22:01] 2026-03-07 20:22:00,823 [wrapper] pandaids: 7040460831
[2026-03-07 21:22:01] 2026-03-07 20:22:00,941 [wrapper] cleanup supervisor_pilot  214303 3534959
[2026-03-07 21:22:01] 2026-03-07 20:22:00,944 [wrapper] Test setup, not cleaning
[2026-03-07 21:22:01] 2026-03-07 20:22:00,946 [wrapper] apfmon messages muted
[2026-03-07 21:22:01] 2026-03-07 20:22:00,949 [wrapper] ==== wrapper stdout END ====
[2026-03-07 21:22:01] 2026-03-07 20:22:00,951 [wrapper] ==== wrapper stderr END ====
[2026-03-07 21:22:01]  *** Error codes and diagnostics ***
[2026-03-07 21:22:01]     "exeErrorCode": 0,
[2026-03-07 21:22:01]     "exeErrorDiag": "",
[2026-03-07 21:22:01]     "pilotErrorCode": 0,
[2026-03-07 21:22:01]     "pilotErrorDiag": "",
[2026-03-07 21:22:01]  *** Listing of results directory ***
[2026-03-07 21:22:01] total 480004
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc    584627 Mar  4 19:35 pilot3.tar.gz
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc      5111 Mar  4 19:36 queuedata.json
[2026-03-07 21:22:01] -rwx------. 1 boinc boinc     36322 Mar  4 19:38 runpilot2-wrapper.sh
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 21:22:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:40 run_atlas
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:40 job.xml
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc 277823577 Mar  7 19:40 EVNT.48958625._000002.pool.root.1
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:40 start_atlas.sh
[2026-03-07 21:22:01] drwxrwx--x. 2 boinc boinc      4096 Mar  7 19:40 shared
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc    597934 Mar  7 19:40 input.tar.gz
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc      6705 Mar  7 19:40 init_data.xml
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:40 boinc_lockfile
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc      2517 Mar  7 19:40 pandaJob.out
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc    999177 Mar  7 19:40 agis_schedconf.cvmfs.json
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc   1521291 Mar  7 19:40 agis_ddmendpoints.agis.ALL.json
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc       443 Mar  7 19:40 workernode_map.json
[2026-03-07 21:22:01] drwx------. 5 boinc boinc      4096 Mar  7 19:40 pilot3
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc 207434835 Mar  7 21:20 HITS.48958627._000119.pool.root.1
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc       529 Mar  7 21:20 boinc_task_state.xml
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc      1044 Mar  7 21:20 memory_monitor_summary.json
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc    295677 Mar  7 21:20 log.48958627._000119.job.log.tgz.1
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc      6345 Mar  7 21:21 heartbeat.json
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc        95 Mar  7 21:21 pilot_heartbeat.json
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc      8192 Mar  7 21:21 boinc_mmap_file
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc        27 Mar  7 21:21 wrapper_checkpoint.txt
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc      5087 Mar  7 21:22 pilotlog.txt
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc    866563 Mar  7 21:22 log.48958627._000119.job.log.1
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc       357 Mar  7 21:22 output.list
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc       620 Mar  7 21:22 runtime_log
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc   1177600 Mar  7 21:22 result.tar.gz
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc      9204 Mar  7 21:22 runtime_log.err
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc       663 Mar  7 21:22 oukNDmrH6H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrQLLDmuF82kn.diag
[2026-03-07 21:22:01] -rw-r--r--. 1 boinc boinc     21586 Mar  7 21:22 stderr.txt
[2026-03-07 21:22:01] HITS file was successfully produced:
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc 207434835 Mar  7 21:20 shared/HITS.pool.root.1
[2026-03-07 21:22:01]  *** Contents of shared directory: ***
[2026-03-07 21:22:01] total 475652
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc 277823577 Mar  7 19:40 ATLAS.root_0
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:40 start_atlas.sh
[2026-03-07 21:22:01] -rw-r--r--. 2 boinc boinc    597934 Mar  7 19:40 input.tar.gz
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc 207434835 Mar  7 21:20 HITS.pool.root.1
[2026-03-07 21:22:01] -rw-------. 1 boinc boinc   1177600 Mar  7 21:22 result.tar.gz
21:22:02 (3530306): run_atlas exited; CPU time 23212.071872
21:22:02 (3530306): called boinc_finish(0)

</stderr_txt>
]]>

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