Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:29:21 (3573568): wrapper (7.7.26015): starting
06:29:21 (3573568): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 06:29:21] Arguments: --nthreads 4
[2026-03-07 06:29:21] Threads: 4
[2026-03-07 06:29:21] Checking for CVMFS
[2026-03-07 06:29:21] No cvmfs_config command found, will try listing directly
[2026-03-07 06:29:21] CVMFS is ok
[2026-03-07 06:29:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 06:29:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 06:29:21] Further information can be found at the LHC@home message board.
[2026-03-07 06:29:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 06:29:21] Checking for apptainer binary...
[2026-03-07 06:29:21] which: no apptainer in ((null))
[2026-03-07 06:29:21] apptainer is not installed, using version from CVMFS
[2026-03-07 06:29:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 06:29:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-07 06:29:21] apptainer works
[2026-03-07 06:29:21] Set ATHENA_PROC_NUMBER=4
[2026-03-07 06:29:21] Set ATHENA_CORE_NUMBER=4
[2026-03-07 06:29:21] Starting ATLAS job with PandaID=7040404672
[2026-03-07 06:29:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 08:03:50]  *** The last 200 lines of the pilot log: ***
[2026-03-07 08:03:50]  is_altstaged=None
[2026-03-07 08:03:50]  is_tar=False
[2026-03-07 08:03:50]  lfn=log.48973452._001399.job.log.tgz.1
[2026-03-07 08:03:50]  mtime=0
[2026-03-07 08:03:50]  protocol_id=None
[2026-03-07 08:03:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 08:03:50]  replicas=None
[2026-03-07 08:03:50]  scope=mc23_13p6TeV
[2026-03-07 08:03:50]  status=None
[2026-03-07 08:03:50]  status_code=0
[2026-03-07 08:03:50]  storage_token=
[2026-03-07 08:03:50]  surl=/var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040404672/log.48973452._001399.job.log.tgz.1
[2026-03-07 08:03:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/46/log.48973452._001399.job.log.tgz.1
[2026-03-07 08:03:50]  workdir=None
[2026-03-07 08:03:50] ]
[2026-03-07 08:03:50] 2026-03-07 07:02:55,784 | INFO     | transferring file log.48973452._001399.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040404672/log.48973452._001399.job.log.tgz.1 to /var/lib/b
[2026-03-07 08:03:50] 2026-03-07 07:02:55,785 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040404672/log.48973452._001399.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/5/lo
[2026-03-07 08:03:50] 2026-03-07 07:02:55,799 | INFO     | adding to output.list: log.48973452._001399.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/46/log.48973452._001399.job.log.tg
[2026-03-07 08:03:50] 2026-03-07 07:02:55,799 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 08:03:50] 2026-03-07 07:02:55,799 | INFO     | summary of transferred files:
[2026-03-07 08:03:50] 2026-03-07 07:02:55,799 | INFO     |  -- lfn=log.48973452._001399.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 08:03:50] 2026-03-07 07:02:55,799 | INFO     | stage-out finished correctly
[2026-03-07 08:03:50] 2026-03-07 07:02:55,853 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 08:03:50] 2026-03-07 07:02:55,878 | INFO     | time since job start (5601s) is within the limit (349056.0s)
[2026-03-07 08:03:50] 2026-03-07 07:02:57,310 | INFO     | monitor loop #403: job 0:7040404672 is in state 'finished'
[2026-03-07 08:03:50] 2026-03-07 07:02:57,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 08:03:50] 2026-03-07 07:02:57,894 | INFO     | time since job start (5603s) is within the limit (349056.0s)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,148 | INFO     | job 7040404672 has state=finished
[2026-03-07 08:03:50] 2026-03-07 07:02:58,148 | INFO     | preparing for final server update for job 7040404672 in state='finished'
[2026-03-07 08:03:50] 2026-03-07 07:02:58,148 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040404672/jobReport.json
[2026-03-07 08:03:50] 2026-03-07 07:02:58,149 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/5/workernode_map.json
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | INFO     | this job has now completed (state=finished)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | INFO     | log transfer has been attempted: DONE
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | INFO     | job 7040404672 has finished - writing final server update
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3392580/.job.ad'
[2026-03-07 08:03:50] 2026-03-07 07:02:58,150 | INFO     | total number of processed events: 400 (read)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,167 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7040404672/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,167 | INFO     | extracted standard info from prmon json
[2026-03-07 08:03:50] 2026-03-07 07:02:58,167 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 08:03:50] 2026-03-07 07:02:58,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 08:03:50] 2026-03-07 07:02:58,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 08:03:50] 2026-03-07 07:02:58,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | fitting pss+swap vs Time
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | sum of square deviations: 190403570.0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | sum of deviations: -354816687.0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | mean x: 1772864262.0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | mean y: 2342794.211764706
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | intersect: 3306071941.4306955
[2026-03-07 08:03:50] 2026-03-07 07:02:58,169 | INFO     | chi2: 0.00039305457806468894
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | current memory leak: -1.86 B/s (using 85 data points, chi2=0.00)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | could have reported an average CPU frequency of 3577 MHz (7 samples)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | ..............................
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . Timing measurements:
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . get job = 0 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . initial setup = 5 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . payload setup = 5 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . stage-in = 0 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . payload execution = 5581 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . stage-out = 0 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | . log creation = 0 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,170 | INFO     | ..............................
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | 
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | job summary report
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | --------------------------------------------------
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | PanDA job id: 7040404672
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | task id: 48973452
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | errors: (none)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | pilot state: finished 
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | transexitcode: 0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | exeerrorcode: 0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | exeerrordiag: 
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | exitcode: 0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | exitmsg: OK
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | cpuconsumptiontime: 21195 s
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | nevents: 400
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | neventsw: 0
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | pid: 3583932
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | pgrp: 3583932
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | corecount: 4
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | event service: False
[2026-03-07 08:03:50] 2026-03-07 07:02:58,217 | INFO     | sizes: {0: 2295424, 1: 2295885, 11: 2295885, 5590: 2322597, 5591: 2331673, 5593: 2331811}
[2026-03-07 08:03:50] 2026-03-07 07:02:58,218 | INFO     | --------------------------------------------------
[2026-03-07 08:03:50] 2026-03-07 07:02:58,218 | INFO     | 
[2026-03-07 08:03:50] 2026-03-07 07:02:58,218 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/5
[2026-03-07 08:03:50] 2026-03-07 07:02:58,237 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | job 7040404672 has completed (purged errors)
[2026-03-07 08:03:50] 2026-03-07 07:02:58,238 | INFO     | overall cleanup function is called
[2026-03-07 08:03:50] 2026-03-07 07:02:59,246 | INFO     | --- collectZombieJob: --- 10, [3583932]
[2026-03-07 08:03:50] 2026-03-07 07:02:59,246 | INFO     | zombie collector waiting for pid 3583932
[2026-03-07 08:03:50] 2026-03-07 07:02:59,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 08:03:50] 2026-03-07 07:02:59,246 | INFO     | collected zombie processes
[2026-03-07 08:03:50] 2026-03-07 07:02:59,246 | INFO     | will attempt to kill all subprocesses of pid=3583932
[2026-03-07 08:03:50] 2026-03-07 07:02:59,752 | INFO     | PID=3578090 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 08:03:50] 2026-03-07 07:02:59,752 | INFO     | .. there are 58 such processes running
[2026-03-07 08:03:50] 2026-03-07 07:03:00,045 | INFO     | process IDs to be killed: [3583932] (in reverse order)
[2026-03-07 08:03:50] 2026-03-07 07:03:00,282 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 08:03:50] 2026-03-07 07:03:00,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 08:03:50] 2026-03-07 07:03:00,309 | INFO     | did not find any defunct processes belonging to 3583932
[2026-03-07 08:03:50] 2026-03-07 07:03:00,334 | INFO     | did not find any defunct processes belonging to 3583932
[2026-03-07 08:03:50] 2026-03-07 07:03:00,334 | INFO     | ready for new job
[2026-03-07 08:03:50] 2026-03-07 07:03:00,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 08:03:50] 2026-03-07 07:03:00,335 | INFO     | **************************************
[2026-03-07 08:03:50] 2026-03-07 07:03:00,336 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 08:03:50] 2026-03-07 07:03:00,336 | INFO     | **************************************
[2026-03-07 08:03:50] 2026-03-07 07:03:00,336 | INFO     | 
[2026-03-07 08:03:50] 2026-03-07 07:03:00,341 | INFO     | architecture information:
[2026-03-07 08:03:50] 2026-03-07 07:03:00,342 | INFO     | executing command: cat /etc/os-release
[2026-03-07 08:03:50] 2026-03-07 07:03:00,355 | INFO     | cat /etc/os-release:
[2026-03-07 08:03:50] NAME="CentOS Linux"
[2026-03-07 08:03:50] VERSION="7 (Core)"
[2026-03-07 08:03:50] ID="centos"
[2026-03-07 08:03:50] ID_LIKE="rhel fedora"
[2026-03-07 08:03:50] VERSION_ID="7"
[2026-03-07 08:03:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 08:03:50] ANSI_COLOR="0;31"
[2026-03-07 08:03:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 08:03:50] HOME_URL="https://www.centos.org/"
[2026-03-07 08:03:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 08:03:50] 
[2026-03-07 08:03:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 08:03:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 08:03:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 08:03:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 08:03:50] 
[2026-03-07 08:03:50] 2026-03-07 07:03:00,355 | INFO     | **************************************
[2026-03-07 08:03:50] 2026-03-07 07:03:00,858 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/5
[2026-03-07 08:03:50] 2026-03-07 07:03:00,872 | INFO     | sufficient remaining disk space (24393023488 B)
[2026-03-07 08:03:50] 2026-03-07 07:03:00,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 08:03:50] 2026-03-07 07:03:00,873 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 08:03:50] 2026-03-07 07:03:00,873 | INFO     | update_server=False
[2026-03-07 08:03:50] 2026-03-07 07:03:00,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 08:03:50] 2026-03-07 07:03:00,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:03:50] 2026-03-07 07:03:00,873 | INFO     | aborting loop
[2026-03-07 08:03:50] 2026-03-07 07:03:01,326 | INFO     | all data control threads have been joined
[2026-03-07 08:03:50] 2026-03-07 07:03:01,364 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 08:03:50] 2026-03-07 07:03:01,878 | INFO     | [job] retrieve thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:01,878 | INFO     | [job] job monitor thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:01,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 08:03:50] 2026-03-07 07:03:01,937 | INFO     | [job] validate thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,074 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,090 | INFO     | all payload control threads have been joined
[2026-03-07 08:03:50] 2026-03-07 07:03:02,207 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,279 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,297 | INFO     | [data] copytool_in thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,331 | INFO     | [data] control thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:02,536 | INFO     | all job control threads have been joined
[2026-03-07 08:03:50] 2026-03-07 07:03:02,698 | INFO     | [payload] validate_post thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:03,095 | INFO     | [payload] control thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:03,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:03:50] 2026-03-07 07:03:03,305 | INFO     | [payload] failed_post thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:03,369 | INFO     | [data] copytool_out thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:03,541 | INFO     | [job] control thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:04,232 | INFO     | [job] queue monitor thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:05,911 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:11,134 | INFO     | job.realtimelogging is not enabled
[2026-03-07 08:03:50] 2026-03-07 07:03:12,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 08:03:50] 2026-03-07 07:03:32,331 | INFO     | PID=3578090 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 08:03:50] 2026-03-07 07:03:32,331 | INFO     | .. there are 58 such processes running
[2026-03-07 08:03:50] 2026-03-07 07:03:32,331 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 08:03:50] 2026-03-07 07:03:32,331 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 08:03:50] 2026-03-07 07:03:32,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 08:03:50] 2026-03-07 07:03:43,493 | INFO     | [monitor] cgroup control has ended
[2026-03-07 08:03:50] 2026-03-07 07:03:45,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23090388346688)>', '<ExcThread(monitor, started 23090077624064)>']
[2026-03-07 08:03:50] 2026-03-07 07:03:45,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 08:03:50] 2026-03-07 07:03:45,397 | INFO     | [monitor] control thread has ended
[2026-03-07 08:03:50] 2026-03-07 07:03:50,092 | INFO     | all workflow threads have been joined
[2026-03-07 08:03:50] 2026-03-07 07:03:50,092 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 08:03:50] 2026-03-07 07:03:50,092 | INFO     | traces error code: 0
[2026-03-07 08:03:50] 2026-03-07 07:03:50,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 08:03:50] 2026-03-07 07:03:50,242 [wrapper] ==== pilot stdout END ====
[2026-03-07 08:03:50] 2026-03-07 07:03:50,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 08:03:50] 2026-03-07 07:03:50,247 [wrapper] pilotpid: 3578090
[2026-03-07 08:03:50] 2026-03-07 07:03:50,250 [wrapper] Pilot exit status: 0
[2026-03-07 08:03:50] 2026-03-07 07:03:50,259 [wrapper] pandaids: 7040404672
[2026-03-07 08:03:50] 2026-03-07 07:03:50,371 [wrapper] cleanup supervisor_pilot  305675 3578091
[2026-03-07 08:03:50] 2026-03-07 07:03:50,373 [wrapper] Test setup, not cleaning
[2026-03-07 08:03:50] 2026-03-07 07:03:50,378 [wrapper] apfmon messages muted
[2026-03-07 08:03:50] 2026-03-07 07:03:50,380 [wrapper] ==== wrapper stdout END ====
[2026-03-07 08:03:50] 2026-03-07 07:03:50,383 [wrapper] ==== wrapper stderr END ====
[2026-03-07 08:03:50]  *** Error codes and diagnostics ***
[2026-03-07 08:03:50]     "exeErrorCode": 0,
[2026-03-07 08:03:50]     "exeErrorDiag": "",
[2026-03-07 08:03:50]     "pilotErrorCode": 0,
[2026-03-07 08:03:50]     "pilotErrorDiag": "",
[2026-03-07 08:03:50]  *** Listing of results directory ***
[2026-03-07 08:03:50] total 503012
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc    584627 Mar  4 19:35 pilot3.tar.gz
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc      5111 Mar  4 19:35 queuedata.json
[2026-03-07 08:03:50] -rwx------. 1 boinc boinc     36322 Mar  4 19:35 runpilot2-wrapper.sh
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc       100 Mar  7 06:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 08:03:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 06:29 run_atlas
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc       105 Mar  7 06:29 job.xml
[2026-03-07 08:03:50] drwxrwx--x. 2 boinc boinc      4096 Mar  7 06:29 shared
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc    597955 Mar  7 06:29 input.tar.gz
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc      6705 Mar  7 06:29 init_data.xml
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc 295671094 Mar  7 06:29 EVNT.48717224._000056.pool.root.1
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc     15845 Mar  7 06:29 start_atlas.sh
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc         0 Mar  7 06:29 boinc_lockfile
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc      2595 Mar  7 06:29 pandaJob.out
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc    999155 Mar  7 06:29 agis_schedconf.cvmfs.json
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc   1521291 Mar  7 06:29 agis_ddmendpoints.agis.ALL.json
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc       440 Mar  7 06:29 workernode_map.json
[2026-03-07 08:03:50] drwx------. 5 boinc boinc      4096 Mar  7 06:29 pilot3
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc 213259171 Mar  7 08:02 HITS.48973452._001399.pool.root.1
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc       529 Mar  7 08:02 boinc_task_state.xml
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc      1043 Mar  7 08:02 memory_monitor_summary.json
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc    292281 Mar  7 08:02 log.48973452._001399.job.log.tgz.1
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc      6344 Mar  7 08:02 heartbeat.json
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc        27 Mar  7 08:03 wrapper_checkpoint.txt
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc      8192 Mar  7 08:03 boinc_mmap_file
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc        95 Mar  7 08:03 pilot_heartbeat.json
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc      4901 Mar  7 08:03 pilotlog.txt
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc    814694 Mar  7 08:03 log.48973452._001399.job.log.1
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc       357 Mar  7 08:03 output.list
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc       620 Mar  7 08:03 runtime_log
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc   1126400 Mar  7 08:03 result.tar.gz
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc      9204 Mar  7 08:03 runtime_log.err
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc       662 Mar  7 08:03 JuWNDm2E6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmSLJLDm6n1Xbn.diag
[2026-03-07 08:03:50] -rw-r--r--. 1 boinc boinc     21404 Mar  7 08:03 stderr.txt
[2026-03-07 08:03:50] HITS file was successfully produced:
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc 213259171 Mar  7 08:02 shared/HITS.pool.root.1
[2026-03-07 08:03:50]  *** Contents of shared directory: ***
[2026-03-07 08:03:50] total 498716
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc    597955 Mar  7 06:29 input.tar.gz
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc 295671094 Mar  7 06:29 ATLAS.root_0
[2026-03-07 08:03:50] -rw-r--r--. 2 boinc boinc     15845 Mar  7 06:29 start_atlas.sh
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc 213259171 Mar  7 08:02 HITS.pool.root.1
[2026-03-07 08:03:50] -rw-------. 1 boinc boinc   1126400 Mar  7 08:03 result.tar.gz
08:03:51 (3573568): run_atlas exited; CPU time 21431.200624
08:03:52 (3573568): called boinc_finish(0)

</stderr_txt>
]]>

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