Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:36:52 (788250): wrapper (7.7.26015): starting
13:36:52 (788250): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 13:36:52] Arguments: --nthreads 12
[2026-03-04 13:36:52] Threads: 12
[2026-03-04 13:36:52] Checking for CVMFS
[2026-03-04 13:36:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 13:36:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 13:36:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 13:36:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 13:36:53] 2.11.3.0 3054375 134896 292212 156891 2 714 34557639 45568001 15247 130560 0 1351557456 99.821 730717901 18905 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-04 13:36:53] CVMFS is ok
[2026-03-04 13:36:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 13:36:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 13:36:53] Further information can be found at the LHC@home message board.
[2026-03-04 13:36:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 13:36:53] Checking for apptainer binary...
[2026-03-04 13:36:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 13:36:53] Running /usr/bin/apptainer --version
[2026-03-04 13:36:53] apptainer version 1.4.1-1.el9
[2026-03-04 13:36:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 13:36:54] wns0170.triumf.lcg
[2026-03-04 13:36:54] apptainer works
[2026-03-04 13:36:54] Set ATHENA_PROC_NUMBER=12
[2026-03-04 13:36:54] Set ATHENA_CORE_NUMBER=12
[2026-03-04 13:36:54] Starting ATLAS job with PandaID=7040404659
[2026-03-04 13:36:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:40:21]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . Timing measurements:
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . get job = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . initial setup = 9 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload setup = 5 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-in = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload execution = 18 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-out = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . log creation = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | ..............................
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040404659/pilotlog.txt
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | monitor loop #53: job 0:7040404659 is in state 'failed'
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,552 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 13:40:21] - Log from pilotlog.txt -
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | found no stored workdir sizes
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | INFO     | will not add max space = 0 B to job metrics
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | wrong length of table data, x=[1772660258.0], y=[1878.0] (must be same and length>=4)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | INFO     | could have reported an average CPU frequency of 2947 MHz (4 samples)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | ..............................
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . Timing measurements:
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . get job = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . initial setup = 9 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload setup = 5 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-in = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload execution = 18 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-out = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . log creation = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | ..............................
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040404659/pilotlog.txt
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | monitor loop #53: job 0:7040404659 is in state 'failed'
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,553 | WARNING  | 
[2026-03-04 13:40:21] [begin log extracts]
[2026-03-04 13:40:21] - Log from pilotlog.txt -
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | found no stored workdir sizes
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | INFO     | will not add max space = 0 B to job metrics
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | WARNING  | wrong length of table data, x=[1772660258.0], y=[1878.0] (must be same and length>=4)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,500 | INFO     | could have reported an average CPU frequency of 2947 MHz (4 samples)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | ..............................
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . Timing measurements:
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . get job = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . initial setup = 9 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload setup = 5 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-in = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . payload execution = 18 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . stage-out = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | . log creation = 0 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | ..............................
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 13:40:21] 2026-03-04 21:39:49,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040404659/pilotlog.txt
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | monitor loop #53: job 0:7040404659 is in state 'failed'
[2026-03-04 13:40:21] 2026-03-04 21:39:49,532 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-04 13:40:21] [end log extracts]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,553 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,553 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | 
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | job summary report
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | --------------------------------------------------
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | PanDA job id: 7040404659
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | task id: 48973452
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 13:37:44,746 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | pilot state: failed 
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | transexitcode: 65
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | exeerrorcode: 65
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | exitcode: 65
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,708 | INFO     | cpuconsumptiontime: 10 s
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | nevents: 0
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | neventsw: 0
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | pid: 797603
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | pgrp: 797603
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | corecount: 12
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | event service: False
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | sizes: {0: 2295843, 11: 2295843, 26: 2319176, 27: 2323496, 144: 2323634}
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | --------------------------------------------------
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | 
[2026-03-04 13:40:21] 2026-03-04 21:39:49,709 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 13:40:21] 2026-03-04 21:39:49,712 | INFO     | time since job start (155s) is within the limit (349056.0s)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | job 7040404659 has completed (purged errors)
[2026-03-04 13:40:21] 2026-03-04 21:39:49,734 | INFO     | overall cleanup function is called
[2026-03-04 13:40:21] 2026-03-04 21:39:50,740 | INFO     | --- collectZombieJob: --- 10, [797603]
[2026-03-04 13:40:21] 2026-03-04 21:39:50,748 | INFO     | zombie collector waiting for pid 797603
[2026-03-04 13:40:21] 2026-03-04 21:39:50,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:40:21] 2026-03-04 21:39:50,748 | INFO     | collected zombie processes
[2026-03-04 13:40:21] 2026-03-04 21:39:50,748 | INFO     | will attempt to kill all subprocesses of pid=797603
[2026-03-04 13:40:21] 2026-03-04 21:39:50,986 | INFO     | PID=792995 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 13:40:21] 2026-03-04 21:39:50,986 | INFO     | .. there are 28 such processes running
[2026-03-04 13:40:21] 2026-03-04 21:39:51,032 | INFO     | process IDs to be killed: [797603] (in reverse order)
[2026-03-04 13:40:21] 2026-03-04 21:39:51,084 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:40:21] 2026-03-04 21:39:51,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:40:21] 2026-03-04 21:39:51,090 | INFO     | did not find any defunct processes belonging to 797603
[2026-03-04 13:40:21] 2026-03-04 21:39:51,095 | INFO     | did not find any defunct processes belonging to 797603
[2026-03-04 13:40:21] 2026-03-04 21:39:51,095 | INFO     | ready for new job
[2026-03-04 13:40:21] 2026-03-04 21:39:51,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:40:21] 2026-03-04 21:39:51,096 | INFO     | **************************************
[2026-03-04 13:40:21] 2026-03-04 21:39:51,096 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:40:21] 2026-03-04 21:39:51,096 | INFO     | **************************************
[2026-03-04 13:40:21] 2026-03-04 21:39:51,097 | INFO     | 
[2026-03-04 13:40:21] 2026-03-04 21:39:51,098 | INFO     | architecture information:
[2026-03-04 13:40:21] 2026-03-04 21:39:51,098 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:40:21] 2026-03-04 21:39:51,118 | INFO     | cat /etc/os-release:
[2026-03-04 13:40:21] NAME="CentOS Linux"
[2026-03-04 13:40:21] VERSION="7 (Core)"
[2026-03-04 13:40:21] ID="centos"
[2026-03-04 13:40:21] ID_LIKE="rhel fedora"
[2026-03-04 13:40:21] VERSION_ID="7"
[2026-03-04 13:40:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:40:21] ANSI_COLOR="0;31"
[2026-03-04 13:40:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:40:21] HOME_URL="https://www.centos.org/"
[2026-03-04 13:40:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:40:21] 
[2026-03-04 13:40:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:40:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:40:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:40:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:40:21] 
[2026-03-04 13:40:21] 2026-03-04 21:39:51,118 | INFO     | **************************************
[2026-03-04 13:40:21] 2026-03-04 21:39:51,621 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 13:40:21] 2026-03-04 21:39:51,633 | INFO     | sufficient remaining disk space (2647849435136 B)
[2026-03-04 13:40:21] 2026-03-04 21:39:51,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:40:21] 2026-03-04 21:39:51,633 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:40:21] 2026-03-04 21:39:51,633 | INFO     | update_server=False
[2026-03-04 13:40:21] 2026-03-04 21:39:51,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:40:21] 2026-03-04 21:39:51,634 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:40:21] 2026-03-04 21:39:51,634 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-04 13:40:21] 2026-03-04 21:39:51,634 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:40:21] 2026-03-04 21:39:51,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:40:21] 2026-03-04 21:39:51,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:40:21] 2026-03-04 21:39:51,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:40:21] 2026-03-04 21:39:52,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 13:40:21] 2026-03-04 21:39:52,037 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 13:40:21] 2026-03-04 21:39:52,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:40:21] 2026-03-04 21:39:52,037 | INFO     | will abort loop
[2026-03-04 13:40:21] 2026-03-04 21:39:52,146 | INFO     | all payload control threads have been joined
[2026-03-04 13:40:21] 2026-03-04 21:39:52,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:40:21] 2026-03-04 21:39:52,309 | INFO     | all data control threads have been joined
[2026-03-04 13:40:21] 2026-03-04 21:39:52,598 | INFO     | all job control threads have been joined
[2026-03-04 13:40:21] 2026-03-04 21:39:52,638 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:52,639 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:52,775 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,043 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,152 | INFO     | [payload] control thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,314 | INFO     | [data] control thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,604 | INFO     | [job] control thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,718 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,784 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,805 | INFO     | [job] validate thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,892 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:53,918 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:54,034 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:54,107 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:54,118 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:39:56,308 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:40:21] 2026-03-04 21:40:14,380 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:40:21] 2026-03-04 21:40:16,365 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348740773696)>', '<ExcThread(monitor, started 140348349196032)>']
[2026-03-04 13:40:21] 2026-03-04 21:40:16,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:40:21] 2026-03-04 21:40:16,787 | INFO     | [monitor] control thread has ended
[2026-03-04 13:40:21] 2026-03-04 21:40:21,392 | INFO     | all workflow threads have been joined
[2026-03-04 13:40:21] 2026-03-04 21:40:21,392 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:40:21] 2026-03-04 21:40:21,392 | INFO     | traces error code: 0
[2026-03-04 13:40:21] 2026-03-04 21:40:21,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:40:21] 2026-03-04 21:40:21,485 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:40:21] 2026-03-04 21:40:21,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:40:21] 2026-03-04 21:40:21,487 [wrapper] pilotpid: 792995
[2026-03-04 13:40:21] 2026-03-04 21:40:21,488 [wrapper] Pilot exit status: 0
[2026-03-04 13:40:21] 2026-03-04 21:40:21,528 [wrapper] pandaids: 7040404659
[2026-03-04 13:40:21] 2026-03-04 21:40:21,564 [wrapper] cleanup supervisor_pilot  793001 792996
[2026-03-04 13:40:21] 2026-03-04 21:40:21,594 [wrapper] Test setup, not cleaning
[2026-03-04 13:40:21] 2026-03-04 21:40:21,599 [wrapper] apfmon messages muted
[2026-03-04 13:40:21] 2026-03-04 21:40:21,639 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:40:21] 2026-03-04 21:40:21,680 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:40:21]  *** Error codes and diagnostics ***
[2026-03-04 13:40:21]     "exeErrorCode": 65,
[2026-03-04 13:40:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 13:40:21]     "pilotErrorCode": 1305,
[2026-03-04 13:40:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 13:40:21]  *** Listing of results directory ***
[2026-03-04 13:40:21] total 292780
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc    584627 Mar  4 10:35 pilot3.tar.gz
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc      5111 Mar  4 10:35 queuedata.json
[2026-03-04 13:40:21] -rwx------. 1 boinc boinc     36322 Mar  4 10:35 runpilot2-wrapper.sh
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc       100 Mar  4 13:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:40:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 13:36 run_atlas
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc       105 Mar  4 13:36 job.xml
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc      6627 Mar  4 13:36 init_data.xml
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc 295671094 Mar  4 13:36 EVNT.48717224._000056.pool.root.1
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc     15845 Mar  4 13:36 start_atlas.sh
[2026-03-04 13:40:21] drwxrwx--x. 2 boinc boinc      4096 Mar  4 13:36 shared
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc    597950 Mar  4 13:36 input.tar.gz
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc         0 Mar  4 13:36 boinc_lockfile
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc      2595 Mar  4 13:36 pandaJob.out
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc    997757 Mar  4 13:37 agis_schedconf.cvmfs.json
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc   1521291 Mar  4 13:37 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc       437 Mar  4 13:37 workernode_map.json
[2026-03-04 13:40:21] drwx------. 5 boinc boinc      4096 Mar  4 13:37 pilot3
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc       970 Mar  4 13:37 memory_monitor_summary.json
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc     20794 Mar  4 13:37 log.48973452._001386.job.log.tgz.1
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc        95 Mar  4 13:39 pilot_heartbeat.json
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc      7011 Mar  4 13:39 heartbeat.json
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc       523 Mar  4 13:39 boinc_task_state.xml
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc        22 Mar  4 13:40 wrapper_checkpoint.txt
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc      8192 Mar  4 13:40 boinc_mmap_file
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc      4733 Mar  4 13:40 pilotlog.txt
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc     81005 Mar  4 13:40 log.48973452._001386.job.log.1
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc       188 Mar  4 13:40 output.list
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc       620 Mar  4 13:40 runtime_log
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc    122880 Mar  4 13:40 result.tar.gz
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc      8635 Mar  4 13:40 runtime_log.err
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc       643 Mar  4 13:40 nDDNDm2E6H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLLJLDmnGktun.diag
[2026-03-04 13:40:21] -rw-r--r--. 1 boinc boinc     21779 Mar  4 13:40 stderr.txt
[2026-03-04 13:40:21] No HITS result produced
[2026-03-04 13:40:21]  *** Contents of shared directory: ***
[2026-03-04 13:40:21] total 289464
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc 295671094 Mar  4 13:36 ATLAS.root_0
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc     15845 Mar  4 13:36 start_atlas.sh
[2026-03-04 13:40:21] -rw-r--r--. 2 boinc boinc    597950 Mar  4 13:36 input.tar.gz
[2026-03-04 13:40:21] -rw-------. 1 boinc boinc    122880 Mar  4 13:40 result.tar.gz
13:40:22 (788250): run_atlas exited; CPU time 14.079725
13:40:22 (788250): called boinc_finish(0)

</stderr_txt>
]]>

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