Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:16:54 (3274451): wrapper (7.7.26015): starting
12:16:54 (3274451): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 12:16:54] Arguments: --nthreads 12
[2026-03-04 12:16:54] Threads: 12
[2026-03-04 12:16:54] Checking for CVMFS
[2026-03-04 12:16:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 12:16:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 12:16:55] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 12:16:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 12:16:55] 2.11.5.0 2137812 134780 365992 156890 1 51 27915910 45568000 21174 130560 0 990908980 99.803 592834354 23340 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-04 12:16:55] CVMFS is ok
[2026-03-04 12:16:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 12:16:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 12:16:55] Further information can be found at the LHC@home message board.
[2026-03-04 12:16:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 12:16:55] Checking for apptainer binary...
[2026-03-04 12:16:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 12:16:55] Running /usr/bin/apptainer --version
[2026-03-04 12:16:55] apptainer version 1.4.1-1.el9
[2026-03-04 12:16:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 12:16:56] wns0059.triumf.lcg
[2026-03-04 12:16:56] apptainer works
[2026-03-04 12:16:56] Set ATHENA_PROC_NUMBER=12
[2026-03-04 12:16:56] Set ATHENA_CORE_NUMBER=12
[2026-03-04 12:16:56] Starting ATLAS job with PandaID=7040361180
[2026-03-04 12:16:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:22:19]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | WARNING  | wrong length of table data, x=[1772655547.0], y=[24416.0] (must be same and length>=4)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . Timing measurements:
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . get job = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . initial setup = 33 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload setup = 24 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-in = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload execution = 54 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-out = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . log creation = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040361180/pilotlog.txt
[2026-03-04 12:22:19] 2026-03-04 20:21:44,498 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 12:22:19] - Log from pilotlog.txt -
[2026-03-04 12:22:19] 2026-03-04 20:21:44,328 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7040361180/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | INFO     | extracted standard info from prmon json
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | WARNING  | wrong length of table data, x=[1772655547.0], y=[24416.0] (must be same and length>=4)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . Timing measurements:
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . get job = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . initial setup = 33 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload setup = 24 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-in = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload execution = 54 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-out = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . log creation = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040361180/pilotlog.txt
[2026-03-04 12:22:19] 2026-03-04 20:21:44,499 | WARNING  | 
[2026-03-04 12:22:19] [begin log extracts]
[2026-03-04 12:22:19] - Log from pilotlog.txt -
[2026-03-04 12:22:19] 2026-03-04 20:21:44,328 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7040361180/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | INFO     | extracted standard info from prmon json
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:22:19] 2026-03-04 20:21:44,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | WARNING  | wrong length of table data, x=[1772655547.0], y=[24416.0] (must be same and length>=4)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,330 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . Timing measurements:
[2026-03-04 12:22:19] 2026-03-04 20:21:44,345 | INFO     | . get job = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . initial setup = 33 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload setup = 24 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-in = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . payload execution = 54 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . stage-out = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | . log creation = 0 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | ..............................
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 12:22:19] 2026-03-04 20:21:44,346 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7040361180/pilotlog.txt
[2026-03-04 12:22:19] [end log extracts]
[2026-03-04 12:22:19] 2026-03-04 20:21:44,499 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,500 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 12:22:19] 2026-03-04 20:21:44,804 | INFO     | time since job start (217s) is within the limit (349056.0s)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,947 | INFO     | 
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | job summary report
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | --------------------------------------------------
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | PanDA job id: 7040361180
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | task id: 48973281
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 12:19:35,499 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | pilot state: failed 
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | transexitcode: 65
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | exeerrorcode: 65
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | exitcode: 65
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | cpuconsumptiontime: 16 s
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | nevents: 0
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | neventsw: 0
[2026-03-04 12:22:19] 2026-03-04 20:21:44,948 | INFO     | pid: 3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | pgrp: 3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | corecount: 12
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | event service: False
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | sizes: {0: 2295412, 1: 2295440, 2: 2295901, 13: 2295901, 83: 2319223, 85: 2323515, 88: 2323671, 204: 2323837}
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | --------------------------------------------------
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | 
[2026-03-04 12:22:19] 2026-03-04 20:21:44,949 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,127 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | job 7040361180 has completed (purged errors)
[2026-03-04 12:22:19] 2026-03-04 20:21:45,128 | INFO     | overall cleanup function is called
[2026-03-04 12:22:19] 2026-03-04 20:21:46,136 | INFO     | --- collectZombieJob: --- 10, [3283183]
[2026-03-04 12:22:19] 2026-03-04 20:21:46,137 | INFO     | zombie collector waiting for pid 3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:46,137 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:22:19] 2026-03-04 20:21:46,137 | INFO     | collected zombie processes
[2026-03-04 12:22:19] 2026-03-04 20:21:46,137 | INFO     | will attempt to kill all subprocesses of pid=3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:46,755 | INFO     | process IDs to be killed: [3283183] (in reverse order)
[2026-03-04 12:22:19] 2026-03-04 20:21:46,889 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:22:19] 2026-03-04 20:21:46,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:22:19] 2026-03-04 20:21:46,910 | INFO     | did not find any defunct processes belonging to 3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:46,932 | INFO     | did not find any defunct processes belonging to 3283183
[2026-03-04 12:22:19] 2026-03-04 20:21:46,932 | INFO     | ready for new job
[2026-03-04 12:22:19] 2026-03-04 20:21:46,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:22:19] 2026-03-04 20:21:46,933 | INFO     | **************************************
[2026-03-04 12:22:19] 2026-03-04 20:21:46,934 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:22:19] 2026-03-04 20:21:46,934 | INFO     | **************************************
[2026-03-04 12:22:19] 2026-03-04 20:21:46,934 | INFO     | 
[2026-03-04 12:22:19] 2026-03-04 20:21:46,946 | INFO     | architecture information:
[2026-03-04 12:22:19] 2026-03-04 20:21:46,947 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:22:19] 2026-03-04 20:21:46,968 | INFO     | cat /etc/os-release:
[2026-03-04 12:22:19] NAME="CentOS Linux"
[2026-03-04 12:22:19] VERSION="7 (Core)"
[2026-03-04 12:22:19] ID="centos"
[2026-03-04 12:22:19] ID_LIKE="rhel fedora"
[2026-03-04 12:22:19] VERSION_ID="7"
[2026-03-04 12:22:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:22:19] ANSI_COLOR="0;31"
[2026-03-04 12:22:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:22:19] HOME_URL="https://www.centos.org/"
[2026-03-04 12:22:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:22:19] 
[2026-03-04 12:22:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:22:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:22:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:22:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:22:19] 
[2026-03-04 12:22:19] 2026-03-04 20:21:46,969 | INFO     | **************************************
[2026-03-04 12:22:19] 2026-03-04 20:21:47,473 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 12:22:19] 2026-03-04 20:21:47,567 | INFO     | sufficient remaining disk space (2047202033664 B)
[2026-03-04 12:22:19] 2026-03-04 20:21:47,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:22:19] 2026-03-04 20:21:47,567 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:22:19] 2026-03-04 20:21:47,567 | INFO     | update_server=False
[2026-03-04 12:22:19] 2026-03-04 20:21:47,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:22:19] 2026-03-04 20:21:47,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:22:19] 2026-03-04 20:21:47,569 | INFO     | aborting loop
[2026-03-04 12:22:19] 2026-03-04 20:21:47,729 | INFO     | all payload control threads have been joined
[2026-03-04 12:22:19] 2026-03-04 20:21:47,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:22:19] 2026-03-04 20:21:47,834 | INFO     | all job control threads have been joined
[2026-03-04 12:22:19] 2026-03-04 20:21:48,100 | INFO     | all data control threads have been joined
[2026-03-04 12:22:19] 2026-03-04 20:21:48,573 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:48,575 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:48,735 | INFO     | [payload] control thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:48,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:22:19] 2026-03-04 20:21:48,840 | INFO     | [job] control thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:48,873 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,030 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,094 | INFO     | [job] validate thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,106 | INFO     | [data] control thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,173 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,620 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:22:19] 2026-03-04 20:21:49,723 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,855 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:49,978 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:50,722 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:50,846 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:21:51,762 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:22:19] 2026-03-04 20:22:07,075 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:22:19] 2026-03-04 20:22:08,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139803851536192)>', '<ExcThread(monitor, started 139802712200960)>']
[2026-03-04 12:22:19] 2026-03-04 20:22:13,607 | INFO     | all workflow threads have been joined
[2026-03-04 12:22:19] 2026-03-04 20:22:13,607 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:22:19] 2026-03-04 20:22:13,608 | INFO     | traces error code: 0
[2026-03-04 12:22:19] 2026-03-04 20:22:13,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | INFO     | PID=3278282 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | INFO     | .. there are 42 such processes running
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:22:19] 2026-03-04 20:22:18,303 | INFO     | [monitor] control thread has ended
[2026-03-04 12:22:19] 2026-03-04 20:22:18,481 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:22:19] 2026-03-04 20:22:18,507 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:22:19] 2026-03-04 20:22:18,551 [wrapper] pilotpid: 3278282
[2026-03-04 12:22:19] 2026-03-04 20:22:18,565 [wrapper] Pilot exit status: 0
[2026-03-04 12:22:19] 2026-03-04 20:22:18,678 [wrapper] pandaids: 7040361180
[2026-03-04 12:22:19] 2026-03-04 20:22:19,007 [wrapper] cleanup supervisor_pilot 3278288 3278283
[2026-03-04 12:22:19] 2026-03-04 20:22:19,011 [wrapper] Test setup, not cleaning
[2026-03-04 12:22:19] 2026-03-04 20:22:19,013 [wrapper] apfmon messages muted
[2026-03-04 12:22:19] 2026-03-04 20:22:19,015 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:22:19] 2026-03-04 20:22:19,017 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:22:19]  *** Error codes and diagnostics ***
[2026-03-04 12:22:19]     "exeErrorCode": 65,
[2026-03-04 12:22:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 12:22:19]     "pilotErrorCode": 1305,
[2026-03-04 12:22:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 12:22:19]  *** Listing of results directory ***
[2026-03-04 12:22:19] total 288936
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc    584627 Mar  4 09:22 pilot3.tar.gz
[2026-03-04 12:22:19] -rwx------. 1 boinc boinc     36322 Mar  4 09:24 runpilot2-wrapper.sh
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc      5111 Mar  4 09:25 queuedata.json
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc       100 Mar  4 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:22:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 12:16 run_atlas
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc       105 Mar  4 12:16 job.xml
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc      6590 Mar  4 12:16 init_data.xml
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc 291715886 Mar  4 12:16 EVNT.48716896._000050.pool.root.1
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc     15845 Mar  4 12:16 start_atlas.sh
[2026-03-04 12:22:19] drwxrwx--x. 2 boinc boinc      4096 Mar  4 12:16 shared
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc    597961 Mar  4 12:16 input.tar.gz
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc         0 Mar  4 12:16 boinc_lockfile
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc      2597 Mar  4 12:16 pandaJob.out
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc    997757 Mar  4 12:17 agis_schedconf.cvmfs.json
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc   1521291 Mar  4 12:17 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc       438 Mar  4 12:18 workernode_map.json
[2026-03-04 12:22:19] drwx------. 5 boinc boinc      4096 Mar  4 12:18 pilot3
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc       524 Mar  4 12:19 boinc_task_state.xml
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc       956 Mar  4 12:19 memory_monitor_summary.json
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc     22146 Mar  4 12:19 log.48973281._001250.job.log.tgz.1
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc        95 Mar  4 12:21 pilot_heartbeat.json
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc      7008 Mar  4 12:21 heartbeat.json
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc       823 Mar  4 12:22 pilotlog.txt
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc        23 Mar  4 12:22 wrapper_checkpoint.txt
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc     88474 Mar  4 12:22 log.48973281._001250.job.log.1
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc      8192 Mar  4 12:22 boinc_mmap_file
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc       188 Mar  4 12:22 output.list
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc       620 Mar  4 12:22 runtime_log
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc    133120 Mar  4 12:22 result.tar.gz
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc      8635 Mar  4 12:22 runtime_log.err
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc       647 Mar  4 12:22 IkjMDms84H9n9Rq4apOajLDm4fhM0noT9bVooX4SDma9ILDmw1TP5m.diag
[2026-03-04 12:22:19] -rw-r--r--. 1 boinc boinc     21815 Mar  4 12:22 stderr.txt
[2026-03-04 12:22:19] No HITS result produced
[2026-03-04 12:22:19]  *** Contents of shared directory: ***
[2026-03-04 12:22:19] total 285616
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc 291715886 Mar  4 12:16 ATLAS.root_0
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc     15845 Mar  4 12:16 start_atlas.sh
[2026-03-04 12:22:19] -rw-r--r--. 2 boinc boinc    597961 Mar  4 12:16 input.tar.gz
[2026-03-04 12:22:19] -rw-------. 1 boinc boinc    133120 Mar  4 12:22 result.tar.gz
12:22:21 (3274451): run_atlas exited; CPU time 25.484154
12:22:21 (3274451): called boinc_finish(0)

</stderr_txt>
]]>

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