Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:14:19 (187227): wrapper (7.7.26015): starting
18:14:19 (187227): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 18:14:19] Arguments: --nthreads 4
[2026-03-04 18:14:19] Threads: 4
[2026-03-04 18:14:19] Checking for CVMFS
[2026-03-04 18:14:19] No cvmfs_config command found, will try listing directly
[2026-03-04 18:14:19] CVMFS is ok
[2026-03-04 18:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 18:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 18:14:19] Further information can be found at the LHC@home message board.
[2026-03-04 18:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 18:14:19] Checking for apptainer binary...
[2026-03-04 18:14:19] which: no apptainer in ((null))
[2026-03-04 18:14:19] apptainer is not installed, using version from CVMFS
[2026-03-04 18:14:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 18:14:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-04 18:14:19] apptainer works
[2026-03-04 18:14:19] Set ATHENA_PROC_NUMBER=4
[2026-03-04 18:14:19] Set ATHENA_CORE_NUMBER=4
[2026-03-04 18:14:19] Starting ATLAS job with PandaID=7039944325
[2026-03-04 18:14:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 20:33:02]  *** The last 200 lines of the pilot log: ***
[2026-03-04 20:33:02] 2026-03-04 19:32:17,131 | INFO     | job 7039944325 has state=finished
[2026-03-04 20:33:02] 2026-03-04 19:32:17,131 | INFO     | preparing for final server update for job 7039944325 in state='finished'
[2026-03-04 20:33:02] 2026-03-04 19:32:17,131 | INFO     | reading metadata from: /var/lib/boinc/var/slot12/slots/0/PanDA_Pilot-7039944325/jobReport.json
[2026-03-04 20:33:02] 2026-03-04 19:32:17,134 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot12/slots/0/workernode_map.json
[2026-03-04 20:33:02] 2026-03-04 19:32:17,134 | INFO     | this job has now completed (state=finished)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,134 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,135 | INFO     | log transfer has been attempted: DONE
[2026-03-04 20:33:02] 2026-03-04 19:32:17,135 | INFO     | job 7039944325 has finished - writing final server update
[2026-03-04 20:33:02] 2026-03-04 19:32:17,135 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19149/.job.ad'
[2026-03-04 20:33:02] 2026-03-04 19:32:17,135 | INFO     | total number of processed events: 400 (read)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,164 | INFO     | using path: /var/lib/boinc/var/slot12/slots/0/PanDA_Pilot-7039944325/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,165 | INFO     | extracted standard info from prmon json
[2026-03-04 20:33:02] 2026-03-04 19:32:17,165 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 20:33:02] 2026-03-04 19:32:17,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 20:33:02] 2026-03-04 19:32:17,165 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 20:33:02] 2026-03-04 19:32:17,165 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 20:33:02] 2026-03-04 19:32:17,168 | INFO     | fitting pss+swap vs Time
[2026-03-04 20:33:02] 2026-03-04 19:32:17,169 | INFO     | sum of square deviations: 762879420.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,169 | INFO     | sum of deviations: 14002218587.000002
[2026-03-04 20:33:02] 2026-03-04 19:32:17,169 | INFO     | mean x: 1772648598.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,170 | INFO     | mean y: 2294730.3777777776
[2026-03-04 20:33:02] 2026-03-04 19:32:17,170 | INFO     | intersect: -32533663766.359615
[2026-03-04 20:33:02] 2026-03-04 19:32:17,170 | INFO     | chi2: 1.1029559870359917
[2026-03-04 20:33:02] 2026-03-04 19:32:17,170 | INFO     | sum of square deviations: 681212772.5
[2026-03-04 20:33:02] 2026-03-04 19:32:17,171 | INFO     | sum of deviations: 13430512526.5
[2026-03-04 20:33:02] 2026-03-04 19:32:17,171 | INFO     | mean x: 1772648445.5
[2026-03-04 20:33:02] 2026-03-04 19:32:17,171 | INFO     | mean y: 2293662.2384615387
[2026-03-04 20:33:02] 2026-03-04 19:32:17,171 | INFO     | intersect: -34946518388.064804
[2026-03-04 20:33:02] 2026-03-04 19:32:17,171 | INFO     | chi2: 1.1040395724018712
[2026-03-04 20:33:02] 2026-03-04 19:32:17,172 | INFO     | current chi2=1.1040395724018712 (change=-0.09824375393178149 %)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,172 | INFO     | right removable region: 129
[2026-03-04 20:33:02] 2026-03-04 19:32:17,172 | INFO     | sum of square deviations: 681212772.5
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | sum of deviations: 1113872688.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | mean x: 1772648750.5
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | mean y: 2318222.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | intersect: -2896196175.128801
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | chi2: 0.0004047432961631364
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | current chi2=0.0004047432961631364 (change=99.96330376724725 %)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,173 | INFO     | sum of square deviations: 605592750.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,174 | INFO     | sum of deviations: 828222558.9999999
[2026-03-04 20:33:02] 2026-03-04 19:32:17,174 | INFO     | mean x: 1772648903.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,174 | INFO     | mean y: 2318795.2
[2026-03-04 20:33:02] 2026-03-04 19:32:17,174 | INFO     | intersect: -2421996572.926852
[2026-03-04 20:33:02] 2026-03-04 19:32:17,175 | INFO     | chi2: 0.00031952755359604764
[2026-03-04 20:33:02] 2026-03-04 19:32:17,175 | INFO     | current chi2=0.00031952755359604764 (change=21.054269057674908 %)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,175 | INFO     | left removable region: 20
[2026-03-04 20:33:02] 2026-03-04 19:32:17,175 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | sum of deviations: 588275399.0000002
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | mean x: 1772649025.0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | mean y: 2318990.4678899082
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | intersect: -2594741591.830881
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | chi2: 0.0002957083689685976
[2026-03-04 20:33:02] 2026-03-04 19:32:17,176 | INFO     | current memory leak: 1.47 B/s (using 109 data points, chi2=0.00)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | could have reported an average CPU frequency of 3173 MHz (8 samples)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | ..............................
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . Timing measurements:
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . get job = 0 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . initial setup = 8 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . payload setup = 8 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . stage-in = 0 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . payload execution = 8223 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . stage-out = 0 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,177 | INFO     | . log creation = 0 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,178 | INFO     | ..............................
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | 
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | job summary report
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | --------------------------------------------------
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | PanDA job id: 7039944325
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | task id: 48700930
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | errors: (none)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 20:33:02] 2026-03-04 19:32:17,270 | INFO     | pilot state: finished 
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | transexitcode: 0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | exeerrorcode: 0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | exeerrordiag: 
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | exitcode: 0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | exitmsg: OK
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | cpuconsumptiontime: 31052 s
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | nevents: 400
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | neventsw: 0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | pid: 446137
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | pgrp: 446137
[2026-03-04 20:33:02] 2026-03-04 19:32:17,271 | INFO     | corecount: 4
[2026-03-04 20:33:02] 2026-03-04 19:32:17,272 | INFO     | event service: False
[2026-03-04 20:33:02] 2026-03-04 19:32:17,272 | INFO     | sizes: {0: 2295327, 1: 2295788, 11: 2295788, 8236: 2323765, 8237: 2323764, 8239: 2332840, 8240: 2333024, 8243: 2333218}
[2026-03-04 20:33:02] 2026-03-04 19:32:17,272 | INFO     | --------------------------------------------------
[2026-03-04 20:33:02] 2026-03-04 19:32:17,272 | INFO     | 
[2026-03-04 20:33:02] 2026-03-04 19:32:17,272 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/0
[2026-03-04 20:33:02] 2026-03-04 19:32:17,306 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,306 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,306 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | job 7039944325 has completed (purged errors)
[2026-03-04 20:33:02] 2026-03-04 19:32:17,308 | INFO     | overall cleanup function is called
[2026-03-04 20:33:02] 2026-03-04 19:32:18,317 | INFO     | --- collectZombieJob: --- 10, [446137]
[2026-03-04 20:33:02] 2026-03-04 19:32:18,318 | INFO     | zombie collector waiting for pid 446137
[2026-03-04 20:33:02] 2026-03-04 19:32:18,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 20:33:02] 2026-03-04 19:32:18,318 | INFO     | collected zombie processes
[2026-03-04 20:33:02] 2026-03-04 19:32:18,318 | INFO     | will attempt to kill all subprocesses of pid=446137
[2026-03-04 20:33:02] 2026-03-04 19:32:19,071 | INFO     | process IDs to be killed: [446137] (in reverse order)
[2026-03-04 20:33:02] 2026-03-04 19:32:19,408 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 20:33:02] 2026-03-04 19:32:19,408 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 20:33:02] 2026-03-04 19:32:19,436 | INFO     | did not find any defunct processes belonging to 446137
[2026-03-04 20:33:02] 2026-03-04 19:32:19,459 | INFO     | did not find any defunct processes belonging to 446137
[2026-03-04 20:33:02] 2026-03-04 19:32:19,459 | INFO     | ready for new job
[2026-03-04 20:33:02] 2026-03-04 19:32:19,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 20:33:02] 2026-03-04 19:32:19,462 | INFO     | **************************************
[2026-03-04 20:33:02] 2026-03-04 19:32:19,462 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 20:33:02] 2026-03-04 19:32:19,462 | INFO     | **************************************
[2026-03-04 20:33:02] 2026-03-04 19:32:19,462 | INFO     | 
[2026-03-04 20:33:02] 2026-03-04 19:32:19,470 | INFO     | architecture information:
[2026-03-04 20:33:02] 2026-03-04 19:32:19,471 | INFO     | executing command: cat /etc/os-release
[2026-03-04 20:33:02] 2026-03-04 19:32:19,494 | INFO     | cat /etc/os-release:
[2026-03-04 20:33:02] NAME="CentOS Linux"
[2026-03-04 20:33:02] VERSION="7 (Core)"
[2026-03-04 20:33:02] ID="centos"
[2026-03-04 20:33:02] ID_LIKE="rhel fedora"
[2026-03-04 20:33:02] VERSION_ID="7"
[2026-03-04 20:33:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 20:33:02] ANSI_COLOR="0;31"
[2026-03-04 20:33:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 20:33:02] HOME_URL="https://www.centos.org/"
[2026-03-04 20:33:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 20:33:02] 
[2026-03-04 20:33:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 20:33:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 20:33:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 20:33:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 20:33:02] 
[2026-03-04 20:33:02] 2026-03-04 19:32:19,495 | INFO     | **************************************
[2026-03-04 20:33:02] 2026-03-04 19:32:19,998 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/0
[2026-03-04 20:33:02] 2026-03-04 19:32:20,025 | INFO     | sufficient remaining disk space (263591034880 B)
[2026-03-04 20:33:02] 2026-03-04 19:32:20,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 20:33:02] 2026-03-04 19:32:20,025 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 20:33:02] 2026-03-04 19:32:20,025 | INFO     | update_server=False
[2026-03-04 20:33:02] 2026-03-04 19:32:20,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 20:33:02] 2026-03-04 19:32:20,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:33:02] 2026-03-04 19:32:20,026 | INFO     | aborting loop
[2026-03-04 20:33:02] 2026-03-04 19:32:20,457 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 20:33:02] 2026-03-04 19:32:20,568 | INFO     | all payload control threads have been joined
[2026-03-04 20:33:02] 2026-03-04 19:32:20,860 | INFO     | all data control threads have been joined
[2026-03-04 20:33:02] 2026-03-04 19:32:20,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 20:33:02] 2026-03-04 19:32:21,031 | INFO     | [job] retrieve thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,032 | INFO     | [job] job monitor thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,289 | INFO     | [data] copytool_in thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,371 | INFO     | [payload] failed_post thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,482 | INFO     | [payload] validate_post thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,576 | INFO     | [payload] control thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,613 | INFO     | all job control threads have been joined
[2026-03-04 20:33:02] 2026-03-04 19:32:21,762 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,846 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:21,866 | INFO     | [data] control thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:22,032 | INFO     | [job] validate thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:22,169 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:22,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 20:33:02] 2026-03-04 19:32:22,618 | INFO     | [job] control thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:22,940 | INFO     | [data] copytool_out thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:23,289 | INFO     | [job] queue monitor thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:24,464 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:30,457 | INFO     | job.realtimelogging is not enabled
[2026-03-04 20:33:02] 2026-03-04 19:32:31,461 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 20:33:02] 2026-03-04 19:32:49,787 | INFO     | PID=298029 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 20:33:02] 2026-03-04 19:32:49,787 | INFO     | .. there are 30 such processes running
[2026-03-04 20:33:02] 2026-03-04 19:32:49,787 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 20:33:02] 2026-03-04 19:32:49,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 20:33:02] 2026-03-04 19:32:49,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 20:33:02] 2026-03-04 19:32:56,499 | INFO     | [monitor] cgroup control has ended
[2026-03-04 20:33:02] 2026-03-04 19:32:57,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22419426273088)>', '<ExcThread(monitor, started 22419118999296)>']
[2026-03-04 20:33:02] 2026-03-04 19:32:57,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 20:33:02] 2026-03-04 19:32:57,828 | INFO     | [monitor] control thread has ended
[2026-03-04 20:33:02] 2026-03-04 19:33:02,094 | INFO     | all workflow threads have been joined
[2026-03-04 20:33:02] 2026-03-04 19:33:02,094 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 20:33:02] 2026-03-04 19:33:02,094 | INFO     | traces error code: 0
[2026-03-04 20:33:02] 2026-03-04 19:33:02,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 20:33:02] 2026-03-04 19:33:02,324 [wrapper] ==== pilot stdout END ====
[2026-03-04 20:33:02] 2026-03-04 19:33:02,329 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 20:33:02] 2026-03-04 19:33:02,332 [wrapper] pilotpid: 298029
[2026-03-04 20:33:02] 2026-03-04 19:33:02,337 [wrapper] Pilot exit status: 0
[2026-03-04 20:33:02] 2026-03-04 19:33:02,352 [wrapper] pandaids: 7039944325
[2026-03-04 20:33:02] 2026-03-04 19:33:02,532 [wrapper] cleanup supervisor_pilot  855298 298034
[2026-03-04 20:33:02] 2026-03-04 19:33:02,536 [wrapper] Test setup, not cleaning
[2026-03-04 20:33:02] 2026-03-04 19:33:02,541 [wrapper] apfmon messages muted
[2026-03-04 20:33:02] 2026-03-04 19:33:02,545 [wrapper] ==== wrapper stdout END ====
[2026-03-04 20:33:02] 2026-03-04 19:33:02,550 [wrapper] ==== wrapper stderr END ====
[2026-03-04 20:33:02]  *** Error codes and diagnostics ***
[2026-03-04 20:33:02]     "exeErrorCode": 0,
[2026-03-04 20:33:02]     "exeErrorDiag": "",
[2026-03-04 20:33:02]     "pilotErrorCode": 0,
[2026-03-04 20:33:02]     "pilotErrorDiag": "",
[2026-03-04 20:33:02]  *** Listing of results directory ***
[2026-03-04 20:33:02] total 341004
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc    584627 Mar  4 13:56 pilot3.tar.gz
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc      5111 Mar  4 13:59 queuedata.json
[2026-03-04 20:33:02] -rwx------. 1 boinc boinc     36322 Mar  4 13:59 runpilot2-wrapper.sh
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc       100 Mar  4 18:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 20:33:02] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 18:14 run_atlas
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc       105 Mar  4 18:14 job.xml
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc      6613 Mar  4 18:14 init_data.xml
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc 189306377 Mar  4 18:14 EVNT.48700928._000094.pool.root.1
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 18:14 start_atlas.sh
[2026-03-04 20:33:02] drwxrwx--x. 2 boinc boinc      4096 Mar  4 18:14 shared
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc    597943 Mar  4 18:14 input.tar.gz
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc         0 Mar  4 18:14 boinc_lockfile
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc      2518 Mar  4 18:14 pandaJob.out
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc    997352 Mar  4 18:14 agis_schedconf.cvmfs.json
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc   1521291 Mar  4 18:14 agis_ddmendpoints.agis.ALL.json
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc       443 Mar  4 18:14 workernode_map.json
[2026-03-04 20:33:02] drwx------. 5 boinc boinc      4096 Mar  4 18:14 pilot3
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc 153033259 Mar  4 20:31 HITS.48700930._002419.pool.root.1
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc       529 Mar  4 20:31 boinc_task_state.xml
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc        95 Mar  4 20:32 pilot_heartbeat.json
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc      1027 Mar  4 20:32 memory_monitor_summary.json
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc    313331 Mar  4 20:32 log.48700930._002419.job.log.tgz.1
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc      6345 Mar  4 20:32 heartbeat.json
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc        27 Mar  4 20:33 wrapper_checkpoint.txt
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc      8192 Mar  4 20:33 boinc_mmap_file
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc      4901 Mar  4 20:33 pilotlog.txt
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc   1140939 Mar  4 20:33 log.48700930._002419.job.log.1
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc       357 Mar  4 20:33 output.list
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc       620 Mar  4 20:33 runtime_log
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc   1474560 Mar  4 20:33 result.tar.gz
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc      9204 Mar  4 20:33 runtime_log.err
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc       663 Mar  4 20:33 MDKODm5z0H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYVILDm8Frvsm.diag
[2026-03-04 20:33:02] -rw-r--r--. 1 boinc boinc     21097 Mar  4 20:33 stderr.txt
[2026-03-04 20:33:02] HITS file was successfully produced:
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc 153033259 Mar  4 20:31 shared/HITS.pool.root.1
[2026-03-04 20:33:02]  *** Contents of shared directory: ***
[2026-03-04 20:33:02] total 336368
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc 189306377 Mar  4 18:14 ATLAS.root_0
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 18:14 start_atlas.sh
[2026-03-04 20:33:02] -rw-r--r--. 2 boinc boinc    597943 Mar  4 18:14 input.tar.gz
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc 153033259 Mar  4 20:31 HITS.pool.root.1
[2026-03-04 20:33:02] -rw-------. 1 boinc boinc   1474560 Mar  4 20:33 result.tar.gz
20:33:04 (187227): run_atlas exited; CPU time 31557.498504
20:33:04 (187227): called boinc_finish(0)

</stderr_txt>
]]>

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