Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
20:59:28 (126683): wrapper (7.7.26015): starting
20:59:28 (126683): wrapper: running run_atlas (--nthreads 5)
[2026-03-04 20:59:28] Arguments: --nthreads 5
[2026-03-04 20:59:28] Threads: 5
[2026-03-04 20:59:28] Checking for CVMFS
[2026-03-04 20:59:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 20:59:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 20:59:29] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 20:59:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 20:59:29] 2.11.0.0 919232 10705 96280 156898 3 188 3973701 4096000 6454 130560 0 23320691 99.996 384842 1291 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-04 20:59:29] CVMFS is ok
[2026-03-04 20:59:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 20:59:29] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-04 20:59:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-04 20:59:29] Further information can be found at the LHC@home message board.
[2026-03-04 20:59:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 20:59:29] Checking for apptainer binary...
[2026-03-04 20:59:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 20:59:29] Running /usr/bin/apptainer --version
[2026-03-04 20:59:29] apptainer version 1.4.5
[2026-03-04 20:59:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 20:59:29] x32-linux4
[2026-03-04 20:59:29] apptainer works
[2026-03-04 20:59:29] Set ATHENA_PROC_NUMBER=5
[2026-03-04 20:59:29] Set ATHENA_CORE_NUMBER=5
[2026-03-04 20:59:30] Starting ATLAS job with PandaID=7036015362
[2026-03-04 20:59:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 01:55:33]  *** The last 200 lines of the pilot log: ***
[2026-03-05 01:55:33] 2026-03-05 06:54:45,793 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,793 | INFO     | log transfer has been attempted: DONE
[2026-03-05 01:55:33] 2026-03-05 06:54:45,793 | INFO     | job 7036015362 has finished - writing final server update
[2026-03-05 01:55:33] 2026-03-05 06:54:45,793 | INFO     | total number of processed events: 400 (read)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,802 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-7036015362/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,802 | INFO     | extracted standard info from prmon json
[2026-03-05 01:55:33] 2026-03-05 06:54:45,802 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 01:55:33] 2026-03-05 06:54:45,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 01:55:33] 2026-03-05 06:54:45,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 01:55:33] 2026-03-05 06:54:45,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 01:55:33] 2026-03-05 06:54:45,812 | INFO     | fitting pss+swap vs Time
[2026-03-05 01:55:33] 2026-03-05 06:54:45,812 | INFO     | sum of square deviations: 7562532492.5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,814 | INFO     | sum of deviations: 25423413287.000004
[2026-03-05 01:55:33] 2026-03-05 06:54:45,814 | INFO     | mean x: 1772684842.5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,814 | INFO     | mean y: 2355857.8620689656
[2026-03-05 01:55:33] 2026-03-05 06:54:45,814 | INFO     | intersect: -5956983744.734423
[2026-03-05 01:55:33] 2026-03-05 06:54:45,814 | INFO     | chi2: 2.1406758731614297
[2026-03-05 01:55:33] 2026-03-05 06:54:45,815 | INFO     | sum of square deviations: 7178069470.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | sum of deviations: 43019345308.99999
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | mean x: 1772684690.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | mean y: 2362736.042105263
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | intersect: -10621626781.168238
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | chi2: 1.3648092430410455
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | current chi2=1.3648092430410455 (change=36.24400311358466 %)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,820 | INFO     | sum of square deviations: 6806862510.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | sum of deviations: 42032593204.99999
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | mean x: 1772684537.5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | mean y: 2362330.6214285716
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | intersect: -10944021254.483635
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | chi2: 1.365194168651924
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | current chi2=1.365194168651924 (change=-0.028203619871511525 %)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,822 | INFO     | right removable region: 279
[2026-03-05 01:55:33] 2026-03-05 06:54:45,823 | INFO     | sum of square deviations: 7178069470.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,827 | INFO     | sum of deviations: -12208229143.999996
[2026-03-05 01:55:33] 2026-03-05 06:54:45,827 | INFO     | mean x: 1772684995.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,827 | INFO     | mean y: 2370649.249122807
[2026-03-05 01:55:33] 2026-03-05 06:54:45,827 | INFO     | intersect: 3017296139.9452286
[2026-03-05 01:55:33] 2026-03-05 06:54:45,828 | INFO     | chi2: 0.8110203664141145
[2026-03-05 01:55:33] 2026-03-05 06:54:45,828 | INFO     | current chi2=0.8110203664141145 (change=62.1138175759243 %)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,828 | INFO     | sum of square deviations: 6806862510.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,829 | INFO     | sum of deviations: -12769501642.5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,829 | INFO     | mean x: 1772685147.5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,830 | INFO     | mean y: 2370866.910714286
[2026-03-05 01:55:33] 2026-03-05 06:54:45,830 | INFO     | intersect: 3327883299.3098526
[2026-03-05 01:55:33] 2026-03-05 06:54:45,837 | INFO     | chi2: 0.8051031368823542
[2026-03-05 01:55:33] 2026-03-05 06:54:45,837 | INFO     | current chi2=0.8051031368823542 (change=0.7296030749416252 %)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,837 | INFO     | left removable region: 20
[2026-03-05 01:55:33] 2026-03-05 06:54:45,837 | INFO     | sum of square deviations: 5387301010.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,838 | INFO     | sum of deviations: 10187489403.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | mean x: 1772685117.0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | mean y: 2375447.694980695
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | intersect: -3349806064.117985
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | chi2: 0.0011759099589841893
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | current memory leak: 1.89 B/s (using 259 data points, chi2=0.00)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | could have reported an average CPU frequency of 3886 MHz (13 samples)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,839 | INFO     | ..............................
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . Timing measurements:
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . get job = 0 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . initial setup = 10 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . payload setup = 10 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . stage-in = 0 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . payload execution = 17655 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . stage-out = 2 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | . log creation = 0 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,840 | INFO     | ..............................
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | 
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | job summary report
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | --------------------------------------------------
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | PanDA job id: 7036015362
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | task id: 48844933
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | errors: (none)
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 01:55:33] 2026-03-05 06:54:45,973 | INFO     | pilot state: finished 
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | transexitcode: 0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | exeerrorcode: 0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | exeerrordiag: 
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | exitcode: 0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | exitmsg: OK
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | cpuconsumptiontime: 71254 s
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | nevents: 400
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | neventsw: 0
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | pid: 135440
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | pgrp: 135440
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | corecount: 5
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | event service: False
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | sizes: {0: 2295721, 1: 2295927, 11: 2295955, 17669: 2328120, 17672: 2337132, 17674: 2337188, 17676: 2337510}
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | --------------------------------------------------
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | 
[2026-03-05 01:55:33] 2026-03-05 06:54:45,974 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-03-05 01:55:33] 2026-03-05 06:54:46,011 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,011 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,011 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,011 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,012 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 01:55:33] 2026-03-05 06:54:46,013 | INFO     | job 7036015362 has completed (purged errors)
[2026-03-05 01:55:33] 2026-03-05 06:54:46,013 | INFO     | overall cleanup function is called
[2026-03-05 01:55:33] 2026-03-05 06:54:47,025 | INFO     | --- collectZombieJob: --- 10, [135440]
[2026-03-05 01:55:33] 2026-03-05 06:54:47,025 | INFO     | zombie collector waiting for pid 135440
[2026-03-05 01:55:33] 2026-03-05 06:54:47,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 01:55:33] 2026-03-05 06:54:47,025 | INFO     | collected zombie processes
[2026-03-05 01:55:33] 2026-03-05 06:54:47,025 | INFO     | will attempt to kill all subprocesses of pid=135440
[2026-03-05 01:55:33] 2026-03-05 06:54:47,212 | INFO     | process IDs to be killed: [135440] (in reverse order)
[2026-03-05 01:55:33] 2026-03-05 06:54:47,327 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 01:55:33] 2026-03-05 06:54:47,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 01:55:33] 2026-03-05 06:54:47,336 | INFO     | did not find any defunct processes belonging to 135440
[2026-03-05 01:55:33] 2026-03-05 06:54:47,343 | INFO     | did not find any defunct processes belonging to 135440
[2026-03-05 01:55:33] 2026-03-05 06:54:47,343 | INFO     | ready for new job
[2026-03-05 01:55:33] 2026-03-05 06:54:47,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 01:55:33] 2026-03-05 06:54:47,349 | INFO     | **************************************
[2026-03-05 01:55:33] 2026-03-05 06:54:47,349 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 01:55:33] 2026-03-05 06:54:47,349 | INFO     | **************************************
[2026-03-05 01:55:33] 2026-03-05 06:54:47,349 | INFO     | 
[2026-03-05 01:55:33] 2026-03-05 06:54:47,354 | INFO     | architecture information:
[2026-03-05 01:55:33] 2026-03-05 06:54:47,355 | INFO     | executing command: cat /etc/os-release
[2026-03-05 01:55:33] 2026-03-05 06:54:47,378 | INFO     | cat /etc/os-release:
[2026-03-05 01:55:33] NAME="CentOS Linux"
[2026-03-05 01:55:33] VERSION="7 (Core)"
[2026-03-05 01:55:33] ID="centos"
[2026-03-05 01:55:33] ID_LIKE="rhel fedora"
[2026-03-05 01:55:33] VERSION_ID="7"
[2026-03-05 01:55:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 01:55:33] ANSI_COLOR="0;31"
[2026-03-05 01:55:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 01:55:33] HOME_URL="https://www.centos.org/"
[2026-03-05 01:55:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 01:55:33] 
[2026-03-05 01:55:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 01:55:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 01:55:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 01:55:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 01:55:33] 
[2026-03-05 01:55:33] 2026-03-05 06:54:47,378 | INFO     | **************************************
[2026-03-05 01:55:33] 2026-03-05 06:54:47,881 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-03-05 01:55:33] 2026-03-05 06:54:47,907 | INFO     | sufficient remaining disk space (134507134976 B)
[2026-03-05 01:55:33] 2026-03-05 06:54:47,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 01:55:33] 2026-03-05 06:54:47,908 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 01:55:33] 2026-03-05 06:54:47,908 | INFO     | update_server=False
[2026-03-05 01:55:33] 2026-03-05 06:54:47,908 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 01:55:33] 2026-03-05 06:54:47,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 01:55:33] 2026-03-05 06:54:48,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 01:55:33] 2026-03-05 06:54:48,078 | INFO     | aborting loop
[2026-03-05 01:55:33] 2026-03-05 06:54:48,112 | INFO     | all data control threads have been joined
[2026-03-05 01:55:33] 2026-03-05 06:54:48,221 | INFO     | all job control threads have been joined
[2026-03-05 01:55:33] 2026-03-05 06:54:48,913 | INFO     | [job] retrieve thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:48,913 | INFO     | [job] queue monitor thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,083 | INFO     | [job] job monitor thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,117 | INFO     | [data] control thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,224 | INFO     | all payload control threads have been joined
[2026-03-05 01:55:33] 2026-03-05 06:54:49,226 | INFO     | [job] control thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,318 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 01:55:33] 2026-03-05 06:54:49,417 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,501 | INFO     | [payload] validate_post thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:49,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 01:55:33] 2026-03-05 06:54:49,982 | INFO     | [data] copytool_in thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:50,229 | INFO     | [payload] control thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:50,311 | INFO     | [payload] failed_post thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:50,321 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:50,391 | INFO     | [job] validate thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:51,414 | INFO     | [data] copytool_out thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:54:53,892 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 01:55:33] 2026-03-05 06:55:18,258 | INFO     | PID=130867 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 01:55:33] 2026-03-05 06:55:18,258 | INFO     | .. there are 8 such processes running
[2026-03-05 01:55:33] 2026-03-05 06:55:18,258 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 01:55:33] 2026-03-05 06:55:18,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 01:55:33] 2026-03-05 06:55:18,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 01:55:33] 2026-03-05 06:55:27,247 | INFO     | [monitor] cgroup control has ended
[2026-03-05 01:55:33] 2026-03-05 06:55:28,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125926396405568)>', '<ExcThread(monitor, started 125926041949952)>']
[2026-03-05 01:55:33] 2026-03-05 06:55:28,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 01:55:33] 2026-03-05 06:55:28,309 | INFO     | [monitor] control thread has ended
[2026-03-05 01:55:33] 2026-03-05 06:55:33,277 | INFO     | all workflow threads have been joined
[2026-03-05 01:55:33] 2026-03-05 06:55:33,278 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 01:55:33] 2026-03-05 06:55:33,278 | INFO     | traces error code: 0
[2026-03-05 01:55:33] 2026-03-05 06:55:33,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 01:55:33] 2026-03-05 06:55:33,429 [wrapper] ==== pilot stdout END ====
[2026-03-05 01:55:33] 2026-03-05 06:55:33,432 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 01:55:33] 2026-03-05 06:55:33,436 [wrapper] pilotpid: 130867
[2026-03-05 01:55:33] 2026-03-05 06:55:33,440 [wrapper] Pilot exit status: 0
[2026-03-05 01:55:33] 2026-03-05 06:55:33,458 [wrapper] pandaids: 7036015362
[2026-03-05 01:55:33] 2026-03-05 06:55:33,526 [wrapper] cleanup supervisor_pilot  344168 130868
[2026-03-05 01:55:33] 2026-03-05 06:55:33,530 [wrapper] Test setup, not cleaning
[2026-03-05 01:55:33] 2026-03-05 06:55:33,539 [wrapper] apfmon messages muted
[2026-03-05 01:55:33] 2026-03-05 06:55:33,542 [wrapper] ==== wrapper stdout END ====
[2026-03-05 01:55:33] 2026-03-05 06:55:33,548 [wrapper] ==== wrapper stderr END ====
[2026-03-05 01:55:33]  *** Error codes and diagnostics ***
[2026-03-05 01:55:33]     "exeErrorCode": 0,
[2026-03-05 01:55:33]     "exeErrorDiag": "",
[2026-03-05 01:55:33]     "pilotErrorCode": 0,
[2026-03-05 01:55:33]     "pilotErrorDiag": "",
[2026-03-05 01:55:33]  *** Listing of results directory ***
[2026-03-05 01:55:33] total 468708
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc    584627 Mar  2 09:48 pilot3.tar.gz
[2026-03-05 01:55:33] -rwx------ 1 boinc boinc     36322 Mar  2 09:51 runpilot2-wrapper.sh
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc      5111 Mar  2 09:52 queuedata.json
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc       100 Mar  4 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 01:55:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 20:59 run_atlas
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc       105 Mar  4 20:59 job.xml
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc 232454815 Mar  4 20:59 EVNT.48454686._000003.pool.root.1
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc     15845 Mar  4 20:59 start_atlas.sh
[2026-03-05 01:55:33] drwxrwx--x 2 boinc boinc      4096 Mar  4 20:59 shared
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc    597961 Mar  4 20:59 input.tar.gz
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc      9742 Mar  4 20:59 init_data.xml
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc         0 Mar  4 20:59 boinc_setup_complete
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc         0 Mar  4 20:59 boinc_lockfile
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc      2624 Mar  4 20:59 pandaJob.out
[2026-03-05 01:55:33] -rw------- 1 boinc boinc    997757 Mar  4 20:59 agis_schedconf.cvmfs.json
[2026-03-05 01:55:33] -rw------- 1 boinc boinc       423 Mar  4 20:59 workernode_map.json
[2026-03-05 01:55:33] drwx------ 5 boinc boinc      4096 Mar  4 20:59 pilot3
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc       530 Mar  5 01:54 boinc_task_state.xml
[2026-03-05 01:55:33] -rw------- 1 boinc boinc 237593864 Mar  5 01:54 HITS.48844933._000067.pool.root.1
[2026-03-05 01:55:33] -rw------- 1 boinc boinc      1039 Mar  5 01:54 memory_monitor_summary.json
[2026-03-05 01:55:33] -rw------- 1 boinc boinc   1521291 Mar  5 01:54 agis_ddmendpoints.agis.ALL.json
[2026-03-05 01:55:33] -rw------- 1 boinc boinc    472312 Mar  5 01:54 log.48844933._000067.job.log.tgz.1
[2026-03-05 01:55:33] -rw------- 1 boinc boinc      6278 Mar  5 01:54 heartbeat.json
[2026-03-05 01:55:33] -rw------- 1 boinc boinc        95 Mar  5 01:55 pilot_heartbeat.json
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc        28 Mar  5 01:55 wrapper_checkpoint.txt
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc      8192 Mar  5 01:55 boinc_mmap_file
[2026-03-05 01:55:33] -rw------- 1 boinc boinc      4826 Mar  5 01:55 pilotlog.txt
[2026-03-05 01:55:33] -rw------- 1 boinc boinc   2507128 Mar  5 01:55 log.48844933._000067.job.log.1
[2026-03-05 01:55:33] -rw------- 1 boinc boinc       357 Mar  5 01:55 output.list
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc       620 Mar  5 01:55 runtime_log
[2026-03-05 01:55:33] -rw------- 1 boinc boinc   3000320 Mar  5 01:55 result.tar.gz
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc      8892 Mar  5 01:55 runtime_log.err
[2026-03-05 01:55:33] -rw------- 1 boinc boinc       647 Mar  5 01:55 foQNDmgnJH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOlDLDmRvxeZn.diag
[2026-03-05 01:55:33] -rw-r--r-- 1 boinc boinc     21140 Mar  5 01:55 stderr.txt
[2026-03-05 01:55:33] HITS file was successfully produced:
[2026-03-05 01:55:33] -rw------- 1 boinc boinc 237593864 Mar  5 01:54 shared/HITS.pool.root.1
[2026-03-05 01:55:33]  *** Contents of shared directory: ***
[2026-03-05 01:55:33] total 462576
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc 232454815 Mar  4 20:59 ATLAS.root_0
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc     15845 Mar  4 20:59 start_atlas.sh
[2026-03-05 01:55:33] -rw-r--r-- 2 boinc boinc    597961 Mar  4 20:59 input.tar.gz
[2026-03-05 01:55:33] -rw------- 1 boinc boinc 237593864 Mar  5 01:54 HITS.pool.root.1
[2026-03-05 01:55:33] -rw------- 1 boinc boinc   3000320 Mar  5 01:55 result.tar.gz
01:55:34 (126683): run_atlas exited; CPU time 71541.878689
01:55:34 (126683): called boinc_finish(0)

</stderr_txt>
]]>

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