Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:19:31 (543817): wrapper (7.7.26015): starting
03:19:31 (543817): wrapper: running run_atlas (--nthreads 3)
[2026-03-05 03:19:31] Arguments: --nthreads 3
[2026-03-05 03:19:31] Threads: 3
[2026-03-05 03:19:31] Checking for CVMFS
[2026-03-05 03:19:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 03:19:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 03:19:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 03:19:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 03:19:31] 2.9.2.0 12617 3848 80624 156899 3 49 28356549 36864001 0 130560 0 1484300 99.981 136537 11326 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-05 03:19:31] CVMFS is ok
[2026-03-05 03:19:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 03:19:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 03:19:31] Further information can be found at the LHC@home message board.
[2026-03-05 03:19:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 03:19:31] Checking for apptainer binary...
[2026-03-05 03:19:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 03:19:31] Running /usr/bin/apptainer --version
[2026-03-05 03:19:31] apptainer version 1.4.1-1.1
[2026-03-05 03:19:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 03:19:31] thA335a
[2026-03-05 03:19:31] apptainer works
[2026-03-05 03:19:32] Set ATHENA_PROC_NUMBER=3
[2026-03-05 03:19:32] Set ATHENA_CORE_NUMBER=3
[2026-03-05 03:19:32] Starting ATLAS job with PandaID=7036160131
[2026-03-05 03:19:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 04:57:55]  *** The last 200 lines of the pilot log: ***
[2026-03-05 04:57:55] 2026-03-05 03:56:57,428 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 04:57:55] 2026-03-05 03:56:57,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:57:55] 2026-03-05 03:56:57,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 04:57:55] 2026-03-05 03:56:57,781 | INFO     | all payload control threads have been joined
[2026-03-05 04:57:55] 2026-03-05 03:56:58,031 | WARNING  | process 552284 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 04:57:55] 2026-03-05 03:56:58,059 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 04:57:55] 2026-03-05 03:56:58,093 | INFO     | number of running child processes to parent process 552284: 1
[2026-03-05 04:57:55] 2026-03-05 03:56:58,093 | INFO     | maximum number of monitored processes: 6
[2026-03-05 04:57:55] 2026-03-05 03:56:58,093 | INFO     | aborting job monitoring since job object (job id=7036160131) has expired
[2026-03-05 04:57:55] 2026-03-05 03:56:58,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 04:57:55] 2026-03-05 03:56:58,093 | INFO     | will abort loop
[2026-03-05 04:57:55] 2026-03-05 03:56:58,434 | INFO     | [job] retrieve thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:58,434 | INFO     | [job] queue monitor thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:58,467 | INFO     | [payload] validate_post thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:58,506 | INFO     | all data control threads have been joined
[2026-03-05 04:57:55] 2026-03-05 03:56:58,786 | INFO     | [payload] control thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,009 | INFO     | all job control threads have been joined
[2026-03-05 04:57:55] 2026-03-05 03:56:59,099 | INFO     | [job] job monitor thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,287 | INFO     | [job] validate thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,413 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,456 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,511 | INFO     | [data] control thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,575 | INFO     | [data] copytool_in thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,595 | INFO     | [payload] failed_post thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,659 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:56:59,696 | INFO     | [data] copytool_out thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:57:00,015 | INFO     | [job] control thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:57:00,204 | INFO     | job.realtimelogging is not enabled
[2026-03-05 04:57:55] 2026-03-05 03:57:01,210 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:57:01,435 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 04:57:55] 2026-03-05 03:57:28,103 | INFO     | PID=547859 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 04:57:55] 2026-03-05 03:57:28,104 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 04:57:55] 2026-03-05 03:57:28,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 04:57:55] 2026-03-05 03:57:28,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 04:57:55] 2026-03-05 03:57:49,348 | INFO     | [monitor] cgroup control has ended
[2026-03-05 04:57:55] 2026-03-05 03:57:50,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609444996928)>', '<ExcThread(monitor, started 140608354113280)>']
[2026-03-05 04:57:55] 2026-03-05 03:57:51,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 04:57:55] 2026-03-05 03:57:51,224 | INFO     | [monitor] control thread has ended
[2026-03-05 04:57:55] 2026-03-05 03:57:55,511 | INFO     | all workflow threads have been joined
[2026-03-05 04:57:55] 2026-03-05 03:57:55,512 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 04:57:55] 2026-03-05 03:57:55,512 | INFO     | traces error code: 0
[2026-03-05 04:57:55] 2026-03-05 03:57:55,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 04:57:55] 2026-03-05 03:57:55,562 [wrapper] ==== pilot stdout END ====
[2026-03-05 04:57:55] 2026-03-05 03:57:55,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 04:57:55] 2026-03-05 03:57:55,567 [wrapper] pilotpid: 547859
[2026-03-05 04:57:55] 2026-03-05 03:57:55,569 [wrapper] Pilot exit status: 0
[2026-03-05 04:57:55] 2026-03-05 03:57:55,577 [wrapper] pandaids: 7036160131
[2026-03-05 04:57:55] 2026-03-05 03:57:55,595 [wrapper] cleanup supervisor_pilot  557479 547860
[2026-03-05 04:57:55] 2026-03-05 03:57:55,597 [wrapper] Test setup, not cleaning
[2026-03-05 04:57:55] 2026-03-05 03:57:55,600 [wrapper] apfmon messages muted
[2026-03-05 04:57:55] 2026-03-05 03:57:55,602 [wrapper] ==== wrapper stdout END ====
[2026-03-05 04:57:55] 2026-03-05 03:57:55,604 [wrapper] ==== wrapper stderr END ====
[2026-03-05 04:57:55]  *** Error codes and diagnostics ***
[2026-03-05 04:57:55]     "exeErrorCode": 0,
[2026-03-05 04:57:55]     "exeErrorDiag": "",
[2026-03-05 04:57:55]     "pilotErrorCode": 0,
[2026-03-05 04:57:55]     "pilotErrorDiag": "",
[2026-03-05 04:57:55]  *** Listing of results directory ***
[2026-03-05 04:57:55] total 354308
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc    584627 Mar  3 00:56 pilot3.tar.gz
[2026-03-05 04:57:55] -rwx------ 1 boinc boinc     36322 Mar  3 01:01 runpilot2-wrapper.sh
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      5111 Mar  3 01:02 queuedata.json
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc       100 Mar  5 03:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 04:57:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  5 03:19 run_atlas
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc       105 Mar  5 03:19 job.xml
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc 207568327 Mar  5 03:19 EVNT.48461825._000003.pool.root.1
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc    597974 Mar  5 03:19 input.tar.gz
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc     15845 Mar  5 03:19 start_atlas.sh
[2026-03-05 04:57:55] drwxrwx--x 2 boinc boinc      4096 Mar  5 03:19 shared
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc         0 Mar  5 03:19 boinc_setup_complete
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      6448 Mar  5 03:19 init_data.xml
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc         0 Mar  5 03:19 boinc_lockfile
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      2628 Mar  5 03:19 pandaJob.out
[2026-03-05 04:57:55] -rw------- 1 boinc boinc    997757 Mar  5 03:19 agis_schedconf.cvmfs.json
[2026-03-05 04:57:55] -rw------- 1 boinc boinc   1521291 Mar  5 03:19 agis_ddmendpoints.agis.ALL.json
[2026-03-05 04:57:55] -rw------- 1 boinc boinc       424 Mar  5 03:19 workernode_map.json
[2026-03-05 04:57:55] drwx------ 5 boinc boinc      4096 Mar  5 03:19 pilot3
[2026-03-05 04:57:55] -rw------- 1 boinc boinc 149119431 Mar  5 04:56 HITS.48852115._000055.pool.root.1
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc       529 Mar  5 04:56 boinc_task_state.xml
[2026-03-05 04:57:55] -rw------- 1 boinc boinc      1013 Mar  5 04:56 memory_monitor_summary.json
[2026-03-05 04:57:55] -rw------- 1 boinc boinc    256078 Mar  5 04:56 log.48852115._000055.job.log.tgz.1
[2026-03-05 04:57:55] -rw------- 1 boinc boinc      6286 Mar  5 04:56 heartbeat.json
[2026-03-05 04:57:55] -rw------- 1 boinc boinc        95 Mar  5 04:57 pilot_heartbeat.json
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      8192 Mar  5 04:57 boinc_mmap_file
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc        27 Mar  5 04:57 wrapper_checkpoint.txt
[2026-03-05 04:57:55] -rw------- 1 boinc boinc      5341 Mar  5 04:57 pilotlog.txt
[2026-03-05 04:57:55] -rw------- 1 boinc boinc    846875 Mar  5 04:57 log.48852115._000055.job.log.1
[2026-03-05 04:57:55] -rw------- 1 boinc boinc       357 Mar  5 04:57 output.list
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc       620 Mar  5 04:57 runtime_log
[2026-03-05 04:57:55] -rw------- 1 boinc boinc   1116160 Mar  5 04:57 result.tar.gz
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      8901 Mar  5 04:57 runtime_log.err
[2026-03-05 04:57:55] -rw------- 1 boinc boinc       658 Mar  5 04:57 ebMMDmWNSH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmA9ELDmJDb9dm.diag
[2026-03-05 04:57:55] -rw-r--r-- 1 boinc boinc      7917 Mar  5 04:57 stderr.txt
[2026-03-05 04:57:55] HITS file was successfully produced:
[2026-03-05 04:57:55] -rw------- 1 boinc boinc 149119431 Mar  5 04:56 shared/HITS.pool.root.1
[2026-03-05 04:57:55]  *** Contents of shared directory: ***
[2026-03-05 04:57:55] total 350032
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc 207568327 Mar  5 03:19 ATLAS.root_0
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc    597974 Mar  5 03:19 input.tar.gz
[2026-03-05 04:57:55] -rw-r--r-- 2 boinc boinc     15845 Mar  5 03:19 start_atlas.sh
[2026-03-05 04:57:55] -rw------- 1 boinc boinc 149119431 Mar  5 04:56 HITS.pool.root.1
[2026-03-05 04:57:55] -rw------- 1 boinc boinc   1116160 Mar  5 04:57 result.tar.gz
04:57:57 (543817): run_atlas exited; CPU time 16799.602905
04:57:57 (543817): called boinc_finish(0)

</stderr_txt>
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