Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:51 (3525283): wrapper (7.7.26015): starting
14:46:51 (3525283): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 14:46:51] Arguments: --nthreads 4
[2026-03-05 14:46:51] Threads: 4
[2026-03-05 14:46:51] Checking for CVMFS
[2026-03-05 14:46:51] No cvmfs_config command found, will try listing directly
[2026-03-05 14:46:51] CVMFS is ok
[2026-03-05 14:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 14:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 14:46:51] Further information can be found at the LHC@home message board.
[2026-03-05 14:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 14:46:51] Checking for apptainer binary...
[2026-03-05 14:46:51] which: no apptainer in ((null))
[2026-03-05 14:46:51] apptainer is not installed, using version from CVMFS
[2026-03-05 14:46:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 14:46:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-05 14:46:51] apptainer works
[2026-03-05 14:46:51] Set ATHENA_PROC_NUMBER=4
[2026-03-05 14:46:51] Set ATHENA_CORE_NUMBER=4
[2026-03-05 14:46:51] Starting ATLAS job with PandaID=7039362824
[2026-03-05 14:46:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 16:19:27]  *** The last 200 lines of the pilot log: ***
[2026-03-05 16:19:27]  guid=4e1812c5-b8b0-408c-941f-eac576da502e
[2026-03-05 16:19:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 16:19:27]  is_altstaged=None
[2026-03-05 16:19:27]  is_tar=False
[2026-03-05 16:19:27]  lfn=log.48958577._000004.job.log.tgz.1
[2026-03-05 16:19:27]  mtime=0
[2026-03-05 16:19:27]  protocol_id=None
[2026-03-05 16:19:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 16:19:27]  replicas=None
[2026-03-05 16:19:27]  scope=mc23_13p6TeV
[2026-03-05 16:19:27]  status=None
[2026-03-05 16:19:27]  status_code=0
[2026-03-05 16:19:27]  storage_token=
[2026-03-05 16:19:27]  surl=/var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7039362824/log.48958577._000004.job.log.tgz.1
[2026-03-05 16:19:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/1b/log.48958577._000004.job.log.tgz.1
[2026-03-05 16:19:27]  workdir=None
[2026-03-05 16:19:27] ]
[2026-03-05 16:19:27] 2026-03-05 15:18:21,004 | INFO     | transferring file log.48958577._000004.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7039362824/log.48958577._000004.job.log.tgz.1 to /var/lib/
[2026-03-05 16:19:27] 2026-03-05 15:18:21,007 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7039362824/log.48958577._000004.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/0/
[2026-03-05 16:19:27] 2026-03-05 15:18:21,033 | INFO     | adding to output.list: log.48958577._000004.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/1b/log.48958577._000004.job.log.tg
[2026-03-05 16:19:27] 2026-03-05 15:18:21,034 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 16:19:27] 2026-03-05 15:18:21,034 | INFO     | summary of transferred files:
[2026-03-05 16:19:27] 2026-03-05 15:18:21,034 | INFO     |  -- lfn=log.48958577._000004.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 16:19:27] 2026-03-05 15:18:21,034 | INFO     | stage-out finished correctly
[2026-03-05 16:19:27] 2026-03-05 15:18:21,683 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 16:19:27] 2026-03-05 15:18:21,776 | INFO     | job 7039362824 has state=finished
[2026-03-05 16:19:27] 2026-03-05 15:18:21,776 | INFO     | preparing for final server update for job 7039362824 in state='finished'
[2026-03-05 16:19:27] 2026-03-05 15:18:21,777 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7039362824/jobReport.json
[2026-03-05 16:19:27] 2026-03-05 15:18:21,778 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/0/workernode_map.json
[2026-03-05 16:19:27] 2026-03-05 15:18:21,778 | INFO     | this job has now completed (state=finished)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,778 | INFO     | log transfer has been attempted: DONE
[2026-03-05 16:19:27] 2026-03-05 15:18:21,778 | INFO     | job 7039362824 has finished - writing final server update
[2026-03-05 16:19:27] 2026-03-05 15:18:21,779 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59960/.job.ad'
[2026-03-05 16:19:27] 2026-03-05 15:18:21,779 | INFO     | total number of processed events: 400 (read)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,802 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7039362824/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,802 | INFO     | extracted standard info from prmon json
[2026-03-05 16:19:27] 2026-03-05 15:18:21,802 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 16:19:27] 2026-03-05 15:18:21,802 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 16:19:27] 2026-03-05 15:18:21,803 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 16:19:27] 2026-03-05 15:18:21,803 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 16:19:27] 2026-03-05 15:18:21,804 | INFO     | fitting pss+swap vs Time
[2026-03-05 16:19:27] 2026-03-05 15:18:21,804 | INFO     | sum of square deviations: 177275882.0
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | sum of deviations: 501802530.99999994
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | mean x: 1772721251.0
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | mean y: 2347156.578313253
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | intersect: -5015571809.461783
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | chi2: 0.0003801262874618379
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | current memory leak: 2.83 B/s (using 83 data points, chi2=0.00)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | could have reported an average CPU frequency of 3600 MHz (7 samples)
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | ..............................
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . Timing measurements:
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . get job = 0 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . initial setup = 5 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . payload setup = 5 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . stage-in = 0 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . payload execution = 5455 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . stage-out = 0 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | . log creation = 0 s
[2026-03-05 16:19:27] 2026-03-05 15:18:21,805 | INFO     | ..............................
[2026-03-05 16:19:27] 2026-03-05 15:18:22,342 | INFO     | 
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | job summary report
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | --------------------------------------------------
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | PanDA job id: 7039362824
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | task id: 48958577
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | errors: (none)
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | pilot state: finished 
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | transexitcode: 0
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | exeerrorcode: 0
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | exeerrordiag: 
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | exitcode: 0
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | exitmsg: OK
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | cpuconsumptiontime: 20740 s
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | nevents: 400
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | neventsw: 0
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | pid: 3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | pgrp: 3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | corecount: 4
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | event service: False
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | sizes: {0: 2295770, 11: 2295770, 5464: 2322373, 5465: 2331451, 5466: 2331589}
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | --------------------------------------------------
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | 
[2026-03-05 16:19:27] 2026-03-05 15:18:22,343 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/0
[2026-03-05 16:19:27] 2026-03-05 15:18:22,363 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,363 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | job 7039362824 has completed (purged errors)
[2026-03-05 16:19:27] 2026-03-05 15:18:22,364 | INFO     | overall cleanup function is called
[2026-03-05 16:19:27] 2026-03-05 15:18:23,370 | INFO     | --- collectZombieJob: --- 10, [3550526]
[2026-03-05 16:19:27] 2026-03-05 15:18:23,371 | INFO     | zombie collector waiting for pid 3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:23,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 16:19:27] 2026-03-05 15:18:23,371 | INFO     | collected zombie processes
[2026-03-05 16:19:27] 2026-03-05 15:18:23,371 | INFO     | will attempt to kill all subprocesses of pid=3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:23,863 | INFO     | process IDs to be killed: [3550526] (in reverse order)
[2026-03-05 16:19:27] 2026-03-05 15:18:24,094 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 16:19:27] 2026-03-05 15:18:24,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 16:19:27] 2026-03-05 15:18:24,132 | INFO     | did not find any defunct processes belonging to 3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:24,163 | INFO     | did not find any defunct processes belonging to 3550526
[2026-03-05 16:19:27] 2026-03-05 15:18:24,164 | INFO     | ready for new job
[2026-03-05 16:19:27] 2026-03-05 15:18:24,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 16:19:27] 2026-03-05 15:18:24,165 | INFO     | **************************************
[2026-03-05 16:19:27] 2026-03-05 15:18:24,165 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 16:19:27] 2026-03-05 15:18:24,165 | INFO     | **************************************
[2026-03-05 16:19:27] 2026-03-05 15:18:24,165 | INFO     | 
[2026-03-05 16:19:27] 2026-03-05 15:18:24,171 | INFO     | architecture information:
[2026-03-05 16:19:27] 2026-03-05 15:18:24,171 | INFO     | executing command: cat /etc/os-release
[2026-03-05 16:19:27] 2026-03-05 15:18:24,190 | INFO     | cat /etc/os-release:
[2026-03-05 16:19:27] NAME="CentOS Linux"
[2026-03-05 16:19:27] VERSION="7 (Core)"
[2026-03-05 16:19:27] ID="centos"
[2026-03-05 16:19:27] ID_LIKE="rhel fedora"
[2026-03-05 16:19:27] VERSION_ID="7"
[2026-03-05 16:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 16:19:27] ANSI_COLOR="0;31"
[2026-03-05 16:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 16:19:27] HOME_URL="https://www.centos.org/"
[2026-03-05 16:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 16:19:27] 
[2026-03-05 16:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 16:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 16:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 16:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 16:19:27] 
[2026-03-05 16:19:27] 2026-03-05 15:18:24,190 | INFO     | **************************************
[2026-03-05 16:19:27] 2026-03-05 15:18:24,693 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | INFO     | sufficient remaining disk space (20156776448 B)
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | INFO     | update_server=False
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 16:19:27] 2026-03-05 15:18:24,707 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 16:19:27] 2026-03-05 15:18:25,221 | INFO     | all data control threads have been joined
[2026-03-05 16:19:27] 2026-03-05 15:18:25,712 | INFO     | [job] retrieve thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:25,773 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,005 | INFO     | [payload] validate_post thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,137 | INFO     | all job control threads have been joined
[2026-03-05 16:19:27] 2026-03-05 15:18:26,208 | INFO     | all payload control threads have been joined
[2026-03-05 16:19:27] 2026-03-05 15:18:26,226 | INFO     | [data] control thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,267 | INFO     | [job] validate thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,594 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,644 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,686 | INFO     | [payload] failed_post thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,730 | INFO     | [data] copytool_out thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:26,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:19:27] 2026-03-05 15:18:26,882 | INFO     | [data] copytool_in thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:27,143 | INFO     | [job] control thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:27,173 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:27,187 | WARNING  | process 3550526 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 16:19:27] 2026-03-05 15:18:27,213 | INFO     | [payload] control thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:27,530 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 16:19:27] 2026-03-05 15:18:27,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 16:19:27] 2026-03-05 15:18:27,883 | INFO     | [job] queue monitor thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:27,998 | INFO     | number of running child processes to parent process 3550526: 1
[2026-03-05 16:19:27] 2026-03-05 15:18:27,998 | INFO     | maximum number of monitored processes: 6
[2026-03-05 16:19:27] 2026-03-05 15:18:27,999 | INFO     | aborting job monitoring since job object (job id=7039362824) has expired
[2026-03-05 16:19:27] 2026-03-05 15:18:27,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 16:19:27] 2026-03-05 15:18:27,999 | INFO     | will abort loop
[2026-03-05 16:19:27] 2026-03-05 15:18:29,004 | INFO     | [job] job monitor thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:31,748 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 16:19:27] 2026-03-05 15:18:54,240 | INFO     | PID=3538252 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 16:19:27] 2026-03-05 15:18:54,240 | INFO     | .. there are 45 such processes running
[2026-03-05 16:19:27] 2026-03-05 15:18:54,241 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 16:19:27] 2026-03-05 15:18:54,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 16:19:27] 2026-03-05 15:18:54,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 16:19:27] 2026-03-05 15:19:13,412 | INFO     | [monitor] cgroup control has ended
[2026-03-05 16:19:27] 2026-03-05 15:19:13,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22890720778048)>', '<ExcThread(monitor, started 22890472007424)>']
[2026-03-05 16:19:27] 2026-03-05 15:19:14,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 16:19:27] 2026-03-05 15:19:14,341 | INFO     | [monitor] control thread has ended
[2026-03-05 16:19:27] 2026-03-05 15:19:18,685 | INFO     | all workflow threads have been joined
[2026-03-05 16:19:27] 2026-03-05 15:19:18,686 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 16:19:27] 2026-03-05 15:19:18,686 | INFO     | traces error code: 0
[2026-03-05 16:19:27] 2026-03-05 15:19:18,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 16:19:27] 2026-03-05 15:19:18,857 [wrapper] ==== pilot stdout END ====
[2026-03-05 16:19:27] 2026-03-05 15:19:18,860 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 16:19:27] 2026-03-05 15:19:18,863 [wrapper] pilotpid: 3538252
[2026-03-05 16:19:27] 2026-03-05 15:19:18,866 [wrapper] Pilot exit status: 0
[2026-03-05 16:19:27] 2026-03-05 15:19:18,876 [wrapper] pandaids: 7039362824
[2026-03-05 16:19:27] 2026-03-05 15:19:19,016 [wrapper] cleanup supervisor_pilot  217916 3538254
[2026-03-05 16:19:27] 2026-03-05 15:19:19,022 [wrapper] Test setup, not cleaning
[2026-03-05 16:19:27] 2026-03-05 15:19:19,027 [wrapper] apfmon messages muted
[2026-03-05 16:19:27] 2026-03-05 15:19:19,038 [wrapper] ==== wrapper stdout END ====
[2026-03-05 16:19:27] 2026-03-05 15:19:19,043 [wrapper] ==== wrapper stderr END ====
[2026-03-05 16:19:27]  *** Error codes and diagnostics ***
[2026-03-05 16:19:27]     "exeErrorCode": 0,
[2026-03-05 16:19:27]     "exeErrorDiag": "",
[2026-03-05 16:19:27]     "pilotErrorCode": 0,
[2026-03-05 16:19:27]     "pilotErrorDiag": "",
[2026-03-05 16:19:27]  *** Listing of results directory ***
[2026-03-05 16:19:27] total 456872
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc    584627 Mar  4 12:53 pilot3.tar.gz
[2026-03-05 16:19:27] -rwx------. 1 boinc boinc     36322 Mar  4 12:57 runpilot2-wrapper.sh
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc      5111 Mar  4 12:59 queuedata.json
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc       100 Mar  5 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 16:19:27] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 14:46 run_atlas
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc       105 Mar  5 14:46 job.xml
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc    597934 Mar  5 14:46 input.tar.gz
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc      6707 Mar  5 14:46 init_data.xml
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc 267849525 Mar  5 14:46 EVNT.48958575._000001.pool.root.1
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar  5 14:46 start_atlas.sh
[2026-03-05 16:19:27] drwxrwx--x. 2 boinc boinc      4096 Mar  5 14:46 shared
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc         0 Mar  5 14:46 boinc_lockfile
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc      2531 Mar  5 14:46 pandaJob.out
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc    998452 Mar  5 14:46 agis_schedconf.cvmfs.json
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc   1521291 Mar  5 14:46 agis_ddmendpoints.agis.ALL.json
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc       445 Mar  5 14:47 workernode_map.json
[2026-03-05 16:19:27] drwx------. 5 boinc boinc      4096 Mar  5 14:47 pilot3
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc 193928852 Mar  5 16:17 HITS.48958577._000004.pool.root.1
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc       530 Mar  5 16:18 boinc_task_state.xml
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc      1031 Mar  5 16:18 memory_monitor_summary.json
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc    266778 Mar  5 16:18 log.48958577._000004.job.log.tgz.1
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc      6341 Mar  5 16:18 heartbeat.json
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc        95 Mar  5 16:18 pilot_heartbeat.json
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc        27 Mar  5 16:19 wrapper_checkpoint.txt
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc      5363 Mar  5 16:19 pilotlog.txt
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc    795141 Mar  5 16:19 log.48958577._000004.job.log.1
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc       357 Mar  5 16:19 output.list
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc       620 Mar  5 16:19 runtime_log
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc   1075200 Mar  5 16:19 result.tar.gz
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc       662 Mar  5 16:19 tb7LDmq1zH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZOILDm8kI6Wm.diag
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc      9221 Mar  5 16:19 runtime_log.err
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc      8192 Mar  5 16:19 boinc_mmap_file
[2026-03-05 16:19:27] -rw-r--r--. 1 boinc boinc     21274 Mar  5 16:19 stderr.txt
[2026-03-05 16:19:27] HITS file was successfully produced:
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc 193928852 Mar  5 16:17 shared/HITS.pool.root.1
[2026-03-05 16:19:27]  *** Contents of shared directory: ***
[2026-03-05 16:19:27] total 452616
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc    597934 Mar  5 14:46 input.tar.gz
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc 267849525 Mar  5 14:46 ATLAS.root_0
[2026-03-05 16:19:27] -rw-r--r--. 2 boinc boinc     15845 Mar  5 14:46 start_atlas.sh
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc 193928852 Mar  5 16:17 HITS.pool.root.1
[2026-03-05 16:19:27] -rw-------. 1 boinc boinc   1075200 Mar  5 16:19 result.tar.gz
16:19:28 (3525283): run_atlas exited; CPU time 20989.213326
16:19:28 (3525283): called boinc_finish(0)

</stderr_txt>
]]>

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