Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:57:43 (24183): wrapper (7.7.26015): starting
00:57:43 (24183): wrapper: running run_atlas (--nthreads 8)
[2026-03-05 00:57:43] Arguments: --nthreads 8
[2026-03-05 00:57:43] Threads: 8
[2026-03-05 00:57:43] Checking for CVMFS
[2026-03-05 00:57:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 00:57:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 00:57:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 00:57:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 00:57:47] 2.11.2.0 25933 113847 109092 156896 2 94 22796905 25165824 1092 130560 158 34027112 99.846 24417296 913 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-05 00:57:47] CVMFS is ok
[2026-03-05 00:57:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 00:57:47] Checking for apptainer binary...
[2026-03-05 00:57:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-05 00:57:47] Running /usr/bin/apptainer --version
[2026-03-05 00:57:47] apptainer version 1.3.2-1.el7
[2026-03-05 00:57:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 00:58:08] cg-vwn397.simple-grid.lan
[2026-03-05 00:58:08] apptainer works
[2026-03-05 00:58:08] Set ATHENA_PROC_NUMBER=8
[2026-03-05 00:58:08] Set ATHENA_CORE_NUMBER=8
[2026-03-05 00:58:08] Starting ATLAS job with PandaID=7036015757
[2026-03-05 00:58:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 11:09:42]  *** The last 200 lines of the pilot log: ***
[2026-03-05 11:09:42] 2026-03-05 10:08:40,773 | INFO     | job 7036015757 has finished - writing final server update
[2026-03-05 11:09:42] 2026-03-05 10:08:40,773 | INFO     | total number of processed events: 400 (read)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,775 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7036015757/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,776 | INFO     | extracted standard info from prmon json
[2026-03-05 11:09:42] 2026-03-05 10:08:40,776 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 11:09:42] 2026-03-05 10:08:40,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 11:09:42] 2026-03-05 10:08:40,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 11:09:42] 2026-03-05 10:08:40,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 11:09:42] 2026-03-05 10:08:40,788 | INFO     | fitting pss+swap vs Time
[2026-03-05 11:09:42] 2026-03-05 10:08:40,789 | INFO     | sum of square deviations: 63684421967.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,802 | INFO     | sum of deviations: 299653179962.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,803 | INFO     | mean x: 1772687318.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,803 | INFO     | mean y: 2502786.4322033897
[2026-03-05 11:09:42] 2026-03-05 10:08:40,803 | INFO     | intersect: -8338491379.123769
[2026-03-05 11:09:42] 2026-03-05 10:08:40,804 | INFO     | chi2: 6.868306178290034
[2026-03-05 11:09:42] 2026-03-05 10:08:40,805 | INFO     | sum of square deviations: 62079005820.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,815 | INFO     | sum of deviations: 336310319303.00006
[2026-03-05 11:09:42] 2026-03-05 10:08:40,816 | INFO     | mean x: 1772687166.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,816 | INFO     | mean y: 2506242.7965811966
[2026-03-05 11:09:42] 2026-03-05 10:08:40,816 | INFO     | intersect: -9600949530.16493
[2026-03-05 11:09:42] 2026-03-05 10:08:40,817 | INFO     | chi2: 6.11811471587232
[2026-03-05 11:09:42] 2026-03-05 10:08:40,817 | INFO     | current chi2=6.11811471587232 (change=10.922510484302334 %)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,817 | INFO     | right removable region: 584
[2026-03-05 11:09:42] 2026-03-05 10:08:40,818 | INFO     | sum of square deviations: 62079005820.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,838 | INFO     | sum of deviations: 95062902701.00003
[2026-03-05 11:09:42] 2026-03-05 10:08:40,838 | INFO     | mean x: 1772687471.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,838 | INFO     | mean y: 2522213.5025641024
[2026-03-05 11:09:42] 2026-03-05 10:08:40,838 | INFO     | intersect: -2712031834.9880733
[2026-03-05 11:09:42] 2026-03-05 10:08:40,839 | INFO     | chi2: 2.5258625907171206
[2026-03-05 11:09:42] 2026-03-05 10:08:40,839 | INFO     | current chi2=2.5258625907171206 (change=63.2243740283289 %)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,840 | INFO     | sum of square deviations: 60500799485.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,850 | INFO     | sum of deviations: -20923647423.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,855 | INFO     | mean x: 1772687623.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,855 | INFO     | mean y: 2533400.6327586207
[2026-03-05 11:09:42] 2026-03-05 10:08:40,855 | INFO     | intersect: 615601180.5934536
[2026-03-05 11:09:42] 2026-03-05 10:08:40,856 | INFO     | chi2: 0.9669432145197725
[2026-03-05 11:09:42] 2026-03-05 10:08:40,856 | INFO     | current chi2=0.9669432145197725 (change=61.7182970256016 %)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,857 | INFO     | sum of square deviations: 58949570400.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,871 | INFO     | sum of deviations: -47736635007.00003
[2026-03-05 11:09:42] 2026-03-05 10:08:40,872 | INFO     | mean x: 1772687776.0
[2026-03-05 11:09:42] 2026-03-05 10:08:40,872 | INFO     | mean y: 2536034.137391304
[2026-03-05 11:09:42] 2026-03-05 10:08:40,872 | INFO     | intersect: 1438036730.2422543
[2026-03-05 11:09:42] 2026-03-05 10:08:40,873 | INFO     | chi2: 0.8875306411967365
[2026-03-05 11:09:42] 2026-03-05 10:08:40,873 | INFO     | current chi2=0.8875306411967365 (change=8.212744257425275 %)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,873 | INFO     | left removable region: 30
[2026-03-05 11:09:42] 2026-03-05 10:08:40,874 | INFO     | sum of square deviations: 52723751342.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,883 | INFO     | sum of deviations: -19162756489.000004
[2026-03-05 11:09:42] 2026-03-05 10:08:40,883 | INFO     | mean x: 1772688050.5
[2026-03-05 11:09:42] 2026-03-05 10:08:40,884 | INFO     | mean y: 2540866.7545126355
[2026-03-05 11:09:42] 2026-03-05 10:08:40,884 | INFO     | intersect: 646834730.1031388
[2026-03-05 11:09:42] 2026-03-05 10:08:40,885 | INFO     | chi2: 0.05884724883173427
[2026-03-05 11:09:42] 2026-03-05 10:08:40,885 | INFO     | current memory leak: -0.36 B/s (using 554 data points, chi2=0.06)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,886 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2026-03-05 11:09:42] 2026-03-05 10:08:40,886 | INFO     | ..............................
[2026-03-05 11:09:42] 2026-03-05 10:08:40,886 | INFO     | . Timing measurements:
[2026-03-05 11:09:42] 2026-03-05 10:08:40,886 | INFO     | . get job = 0 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . initial setup = 122 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . payload setup = 149 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . stage-in = 0 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . payload execution = 36085 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . stage-out = 6 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | . log creation = 1 s
[2026-03-05 11:09:42] 2026-03-05 10:08:40,887 | INFO     | ..............................
[2026-03-05 11:09:42] 2026-03-05 10:08:41,031 | INFO     | 
[2026-03-05 11:09:42] 2026-03-05 10:08:41,031 | INFO     | job summary report
[2026-03-05 11:09:42] 2026-03-05 10:08:41,031 | INFO     | --------------------------------------------------
[2026-03-05 11:09:42] 2026-03-05 10:08:41,031 | INFO     | PanDA job id: 7036015757
[2026-03-05 11:09:42] 2026-03-05 10:08:41,031 | INFO     | task id: 48845726
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | errors: (none)
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | pilot state: finished 
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | transexitcode: 0
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | exeerrorcode: 0
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | exeerrordiag: 
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | exitcode: 0
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | exitmsg: OK
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | cpuconsumptiontime: 156029 s
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | nevents: 400
[2026-03-05 11:09:42] 2026-03-05 10:08:41,032 | INFO     | neventsw: 0
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | pid: 32651
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | pgrp: 32651
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | corecount: 8
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | event service: False
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | sizes: {0: 2294795, 1: 2295480, 2: 2295941, 36239: 2336586, 36246: 2345640, 36249: 2345778}
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | --------------------------------------------------
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | 
[2026-03-05 11:09:42] 2026-03-05 10:08:41,033 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-05 11:09:42] 2026-03-05 10:08:41,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | job 7036015757 has completed (purged errors)
[2026-03-05 11:09:42] 2026-03-05 10:08:41,545 | INFO     | overall cleanup function is called
[2026-03-05 11:09:42] 2026-03-05 10:08:42,554 | INFO     | --- collectZombieJob: --- 10, [32651]
[2026-03-05 11:09:42] 2026-03-05 10:08:42,554 | INFO     | zombie collector waiting for pid 32651
[2026-03-05 11:09:42] 2026-03-05 10:08:42,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 11:09:42] 2026-03-05 10:08:42,554 | INFO     | collected zombie processes
[2026-03-05 11:09:42] 2026-03-05 10:08:42,554 | INFO     | will attempt to kill all subprocesses of pid=32651
[2026-03-05 11:09:42] 2026-03-05 10:08:42,645 | INFO     | process IDs to be killed: [32651] (in reverse order)
[2026-03-05 11:09:42] 2026-03-05 10:08:42,711 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 11:09:42] 2026-03-05 10:08:42,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 11:09:42] 2026-03-05 10:08:42,713 | INFO     | did not find any defunct processes belonging to 32651
[2026-03-05 11:09:42] 2026-03-05 10:08:42,715 | INFO     | did not find any defunct processes belonging to 32651
[2026-03-05 11:09:42] 2026-03-05 10:08:42,715 | INFO     | ready for new job
[2026-03-05 11:09:42] 2026-03-05 10:08:42,716 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 11:09:42] 2026-03-05 10:08:42,719 | INFO     | **************************************
[2026-03-05 11:09:42] 2026-03-05 10:08:42,719 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 11:09:42] 2026-03-05 10:08:42,719 | INFO     | **************************************
[2026-03-05 11:09:42] 2026-03-05 10:08:42,719 | INFO     | 
[2026-03-05 11:09:42] 2026-03-05 10:08:42,720 | INFO     | pilot is running in a VM
[2026-03-05 11:09:42] 2026-03-05 10:08:42,720 | INFO     | architecture information:
[2026-03-05 11:09:42] 2026-03-05 10:08:42,721 | INFO     | executing command: cat /etc/os-release
[2026-03-05 11:09:42] 2026-03-05 10:08:42,945 | INFO     | cat /etc/os-release:
[2026-03-05 11:09:42] NAME="CentOS Linux"
[2026-03-05 11:09:42] VERSION="7 (Core)"
[2026-03-05 11:09:42] ID="centos"
[2026-03-05 11:09:42] ID_LIKE="rhel fedora"
[2026-03-05 11:09:42] VERSION_ID="7"
[2026-03-05 11:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 11:09:42] ANSI_COLOR="0;31"
[2026-03-05 11:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 11:09:42] HOME_URL="https://www.centos.org/"
[2026-03-05 11:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 11:09:42] 
[2026-03-05 11:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 11:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 11:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 11:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 11:09:42] 
[2026-03-05 11:09:42] 2026-03-05 10:08:42,946 | INFO     | **************************************
[2026-03-05 11:09:42] 2026-03-05 10:08:43,449 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-05 11:09:42] 2026-03-05 10:08:43,672 | INFO     | sufficient remaining disk space (495700672512 B)
[2026-03-05 11:09:42] 2026-03-05 10:08:43,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 11:09:42] 2026-03-05 10:08:43,672 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 11:09:42] 2026-03-05 10:08:43,672 | INFO     | update_server=False
[2026-03-05 11:09:42] 2026-03-05 10:08:43,672 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 11:09:42] 2026-03-05 10:08:43,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 11:09:42] 2026-03-05 10:08:43,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:09:42] 2026-03-05 10:08:43,679 | INFO     | aborting loop
[2026-03-05 11:09:42] 2026-03-05 10:08:43,714 | INFO     | all payload control threads have been joined
[2026-03-05 11:09:42] 2026-03-05 10:08:44,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 11:09:42] 2026-03-05 10:08:44,678 | INFO     | [job] retrieve thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:44,685 | INFO     | [job] job monitor thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:44,720 | INFO     | [payload] control thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:44,725 | INFO     | all data control threads have been joined
[2026-03-05 11:09:42] 2026-03-05 10:08:44,786 | INFO     | [payload] validate_post thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:44,823 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:44,975 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,097 | INFO     | all job control threads have been joined
[2026-03-05 11:09:42] 2026-03-05 10:08:45,625 | INFO     | [job] validate thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,648 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,668 | INFO     | [data] copytool_in thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,680 | INFO     | [data] copytool_out thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,731 | INFO     | [data] control thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,754 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:45,811 | INFO     | [payload] failed_post thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:46,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 11:09:42] 2026-03-05 10:08:46,103 | INFO     | [job] control thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:47,054 | INFO     | [job] queue monitor thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:08:48,158 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 11:09:42] 2026-03-05 10:09:12,249 | INFO     | 36375s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-05 11:09:42] 2026-03-05 10:09:13,364 | INFO     | PID=28201 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-05 11:09:42] 2026-03-05 10:09:13,365 | INFO     | .. there are 2 such processes running
[2026-03-05 11:09:42] 2026-03-05 10:09:13,365 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 11:09:42] 2026-03-05 10:09:13,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 11:09:42] 2026-03-05 10:09:13,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 11:09:42] 2026-03-05 10:09:31,584 | INFO     | [monitor] cgroup control has ended
[2026-03-05 11:09:42] 2026-03-05 10:09:31,940 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359291672384)>', '<ExcThread(monitor, started 140358725924608)>']
[2026-03-05 11:09:42] 2026-03-05 10:09:32,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 11:09:42] 2026-03-05 10:09:32,479 | INFO     | [monitor] control thread has ended
[2026-03-05 11:09:42] 2026-03-05 10:09:36,966 | INFO     | all workflow threads have been joined
[2026-03-05 11:09:42] 2026-03-05 10:09:36,966 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 11:09:42] 2026-03-05 10:09:36,966 | INFO     | traces error code: 0
[2026-03-05 11:09:42] 2026-03-05 10:09:36,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 11:09:42] 2026-03-05 10:09:37,378 [wrapper] ==== pilot stdout END ====
[2026-03-05 11:09:42] 2026-03-05 10:09:37,488 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 11:09:42] 2026-03-05 10:09:37,605 [wrapper] pilotpid: 28201
[2026-03-05 11:09:42] 2026-03-05 10:09:37,708 [wrapper] Pilot exit status: 0
[2026-03-05 11:09:42] 2026-03-05 10:09:37,888 [wrapper] pandaids: 7036015757
[2026-03-05 11:09:42] 2026-03-05 10:09:38,622 [wrapper] cleanup supervisor_pilot 26660 28202
[2026-03-05 11:09:42] 2026-03-05 10:09:38,726 [wrapper] Test setup, not cleaning
[2026-03-05 11:09:42] 2026-03-05 10:09:38,836 [wrapper] apfmon messages muted
[2026-03-05 11:09:42] 2026-03-05 10:09:38,968 [wrapper] ==== wrapper stdout END ====
[2026-03-05 11:09:42] 2026-03-05 10:09:39,093 [wrapper] ==== wrapper stderr END ====
[2026-03-05 11:09:42]  *** Error codes and diagnostics ***
[2026-03-05 11:09:42]     "exeErrorCode": 0,
[2026-03-05 11:09:42]     "exeErrorDiag": "",
[2026-03-05 11:09:42]     "pilotErrorCode": 0,
[2026-03-05 11:09:42]     "pilotErrorDiag": "",
[2026-03-05 11:09:42]  *** Listing of results directory ***
[2026-03-05 11:09:42] total 549496
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc    584627 Mar  2 15:48 pilot3.tar.gz
[2026-03-05 11:09:42] -rwx------. 1 boinc boinc     36322 Mar  2 15:51 runpilot2-wrapper.sh
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc      5111 Mar  2 15:52 queuedata.json
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc       100 Mar  5 00:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 11:09:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 00:57 run_atlas
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc       105 Mar  5 00:57 job.xml
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc      6391 Mar  5 00:57 init_data.xml
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc 262365835 Mar  5 00:57 EVNT.48450584._000003.pool.root.1
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc     15845 Mar  5 00:57 start_atlas.sh
[2026-03-05 11:09:42] drwxrwx--x. 2 boinc boinc        68 Mar  5 00:57 shared
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc    597966 Mar  5 00:57 input.tar.gz
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc         0 Mar  5 00:57 boinc_lockfile
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc      2623 Mar  5 00:58 pandaJob.out
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc       415 Mar  5 01:04 workernode_map.json
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc    997765 Mar  5 01:04 agis_schedconf.cvmfs.json
[2026-03-05 11:09:42] drwx------. 5 boinc boinc      4096 Mar  5 01:04 pilot3
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc 284754603 Mar  5 11:06 HITS.48845726._000057.pool.root.1
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc       532 Mar  5 11:07 boinc_task_state.xml
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc      1019 Mar  5 11:08 memory_monitor_summary.json
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc   1521291 Mar  5 11:08 agis_ddmendpoints.agis.ALL.json
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc        95 Mar  5 11:08 pilot_heartbeat.json
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc    762028 Mar  5 11:08 log.48845726._000057.job.log.tgz.1
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc      6317 Mar  5 11:08 heartbeat.json
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc      8192 Mar  5 11:09 boinc_mmap_file
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc        29 Mar  5 11:09 wrapper_checkpoint.txt
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc      4996 Mar  5 11:09 pilotlog.txt
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc   5055177 Mar  5 11:09 log.48845726._000057.job.log.1
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc       357 Mar  5 11:09 output.list
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc       620 Mar  5 11:09 runtime_log
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc   5836800 Mar  5 11:09 result.tar.gz
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc      8816 Mar  5 11:09 runtime_log.err
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc       658 Mar  5 11:09 2KHODmgnJH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxlDLDmHDWdgm.diag
[2026-03-05 11:09:42] -rw-r--r--. 1 boinc boinc     20727 Mar  5 11:09 stderr.txt
[2026-03-05 11:09:42] HITS file was successfully produced:
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc 284754603 Mar  5 11:06 shared/HITS.pool.root.1
[2026-03-05 11:09:42]  *** Contents of shared directory: ***
[2026-03-05 11:09:42] total 540604
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc 262365835 Mar  5 00:57 ATLAS.root_0
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc     15845 Mar  5 00:57 start_atlas.sh
[2026-03-05 11:09:42] -rw-r--r--. 2 boinc boinc    597966 Mar  5 00:57 input.tar.gz
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc 284754603 Mar  5 11:06 HITS.pool.root.1
[2026-03-05 11:09:42] -rw-------. 1 boinc boinc   5836800 Mar  5 11:09 result.tar.gz
11:09:43 (24183): run_atlas exited; CPU time 156438.370756
11:09:43 (24183): called boinc_finish(0)

</stderr_txt>
]]>

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