Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:59 (2187252): wrapper (7.7.26015): starting
12:04:59 (2187252): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 12:04:59] Arguments: --nthreads 4
[2026-03-05 12:04:59] Threads: 4
[2026-03-05 12:04:59] Checking for CVMFS
[2026-03-05 12:04:59] No cvmfs_config command found, will try listing directly
[2026-03-05 12:04:59] CVMFS is ok
[2026-03-05 12:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 12:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 12:04:59] Further information can be found at the LHC@home message board.
[2026-03-05 12:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 12:04:59] Checking for apptainer binary...
[2026-03-05 12:04:59] which: no apptainer in ((null))
[2026-03-05 12:04:59] apptainer is not installed, using version from CVMFS
[2026-03-05 12:04:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 12:04:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-05 12:04:59] apptainer works
[2026-03-05 12:04:59] Set ATHENA_PROC_NUMBER=4
[2026-03-05 12:04:59] Set ATHENA_CORE_NUMBER=4
[2026-03-05 12:04:59] Starting ATLAS job with PandaID=7038975772
[2026-03-05 12:04:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 14:46:34]  *** The last 200 lines of the pilot log: ***
[2026-03-05 14:46:34] 2026-03-05 13:45:34,175 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 14:46:34] 2026-03-05 13:45:34,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 14:46:34] 2026-03-05 13:45:34,176 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | fitting pss+swap vs Time
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | sum of square deviations: 1223016419.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | sum of deviations: 8972994531.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | mean x: 1772713523.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | mean y: 2300762.379746835
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | intersect: -13003696947.690441
[2026-03-05 14:46:34] 2026-03-05 13:45:34,178 | INFO     | chi2: 1.93200182018834
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | sum of square deviations: 1110539892.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | sum of deviations: 18485881761.999996
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | mean x: 1772713371.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | mean y: 2313311.6928104577
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | intersect: -29506009631.30907
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | chi2: 1.1072649883846428
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | current chi2=1.1072649883846428 (change=42.68820159410089 %)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,179 | INFO     | sum of square deviations: 1005179777.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | sum of deviations: 17785957605.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | mean x: 1772713218.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | mean y: 2312298.2635135134
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | intersect: -31364616158.10799
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | chi2: 1.1079697358316805
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | current chi2=1.1079697358316805 (change=-0.0636475870212216 %)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | right removable region: 147
[2026-03-05 14:46:34] 2026-03-05 13:45:34,180 | INFO     | sum of square deviations: 1110539892.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | sum of deviations: -7051814049.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | mean x: 1772713676.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | mean y: 2322099.836601307
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | intersect: 11258871545.1322
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | chi2: 0.846963110978426
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | current chi2=0.846963110978426 (change=56.16137096103457 %)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | sum of square deviations: 1005179777.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | sum of deviations: -7328564430.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,181 | INFO     | mean x: 1772713828.5
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | mean y: 2322495.060810811
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | intersect: 12926823968.592321
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | chi2: 0.8471533238254854
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | current chi2=0.8471533238254854 (change=-0.022458220977250996 %)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | left removable region: 20
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | sum of square deviations: 635130048.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | sum of deviations: 1275576063.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | mean x: 1772713798.0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | mean y: 2337573.1417322834
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | intersect: -3557927437.778704
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | chi2: 6.331471249726451e-05
[2026-03-05 14:46:34] 2026-03-05 13:45:34,182 | INFO     | current memory leak: 2.01 B/s (using 127 data points, chi2=0.00)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | could have reported an average CPU frequency of 3592 MHz (9 samples)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | ..............................
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . Timing measurements:
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . get job = 0 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . initial setup = 5 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . payload setup = 5 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . stage-in = 0 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . payload execution = 9596 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . stage-out = 0 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | . log creation = 0 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,183 | INFO     | ..............................
[2026-03-05 14:46:34] 2026-03-05 13:45:34,584 | INFO     | 
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | job summary report
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | --------------------------------------------------
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | PanDA job id: 7038975772
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | task id: 48849014
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | errors: (none)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | pilot state: finished 
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | transexitcode: 0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | exeerrorcode: 0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | exeerrordiag: 
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | exitcode: 0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | exitmsg: OK
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | cpuconsumptiontime: 36926 s
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | nevents: 400
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | neventsw: 0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | pid: 2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | pgrp: 2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | corecount: 4
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | event service: False
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | sizes: {0: 2295406, 1: 2295810, 11: 2295810, 9606: 2324352, 9608: 2333374, 9610: 2333816}
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | --------------------------------------------------
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | 
[2026-03-05 14:46:34] 2026-03-05 13:45:34,585 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/0
[2026-03-05 14:46:34] 2026-03-05 13:45:34,601 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | job 7038975772 has completed (purged errors)
[2026-03-05 14:46:34] 2026-03-05 13:45:34,602 | INFO     | overall cleanup function is called
[2026-03-05 14:46:34] 2026-03-05 13:45:35,295 | INFO     | PID=2200501 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 14:46:34] 2026-03-05 13:45:35,295 | INFO     | .. there are 44 such processes running
[2026-03-05 14:46:34] 2026-03-05 13:45:35,608 | INFO     | --- collectZombieJob: --- 10, [2216662]
[2026-03-05 14:46:34] 2026-03-05 13:45:35,609 | INFO     | zombie collector waiting for pid 2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:35,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 14:46:34] 2026-03-05 13:45:35,609 | INFO     | collected zombie processes
[2026-03-05 14:46:34] 2026-03-05 13:45:35,609 | INFO     | will attempt to kill all subprocesses of pid=2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:36,080 | INFO     | process IDs to be killed: [2216662] (in reverse order)
[2026-03-05 14:46:34] 2026-03-05 13:45:36,308 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 14:46:34] 2026-03-05 13:45:36,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 14:46:34] 2026-03-05 13:45:36,379 | INFO     | did not find any defunct processes belonging to 2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:36,449 | INFO     | did not find any defunct processes belonging to 2216662
[2026-03-05 14:46:34] 2026-03-05 13:45:36,449 | INFO     | ready for new job
[2026-03-05 14:46:34] 2026-03-05 13:45:36,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 14:46:34] 2026-03-05 13:45:36,451 | INFO     | **************************************
[2026-03-05 14:46:34] 2026-03-05 13:45:36,451 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 14:46:34] 2026-03-05 13:45:36,451 | INFO     | **************************************
[2026-03-05 14:46:34] 2026-03-05 13:45:36,451 | INFO     | 
[2026-03-05 14:46:34] 2026-03-05 13:45:36,458 | INFO     | architecture information:
[2026-03-05 14:46:34] 2026-03-05 13:45:36,458 | INFO     | executing command: cat /etc/os-release
[2026-03-05 14:46:34] 2026-03-05 13:45:36,471 | INFO     | cat /etc/os-release:
[2026-03-05 14:46:34] NAME="CentOS Linux"
[2026-03-05 14:46:34] VERSION="7 (Core)"
[2026-03-05 14:46:34] ID="centos"
[2026-03-05 14:46:34] ID_LIKE="rhel fedora"
[2026-03-05 14:46:34] VERSION_ID="7"
[2026-03-05 14:46:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 14:46:34] ANSI_COLOR="0;31"
[2026-03-05 14:46:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 14:46:34] HOME_URL="https://www.centos.org/"
[2026-03-05 14:46:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 14:46:34] 
[2026-03-05 14:46:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 14:46:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 14:46:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 14:46:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 14:46:34] 
[2026-03-05 14:46:34] 2026-03-05 13:45:36,471 | INFO     | **************************************
[2026-03-05 14:46:34] 2026-03-05 13:45:36,787 | WARNING  | process 2216662 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 14:46:34] 2026-03-05 13:45:36,974 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-05 14:46:34] 2026-03-05 13:45:36,990 | INFO     | sufficient remaining disk space (20649607168 B)
[2026-03-05 14:46:34] 2026-03-05 13:45:36,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 14:46:34] 2026-03-05 13:45:36,991 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 14:46:34] 2026-03-05 13:45:36,991 | INFO     | update_server=False
[2026-03-05 14:46:34] 2026-03-05 13:45:36,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 14:46:34] 2026-03-05 13:45:37,133 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 14:46:34] 2026-03-05 13:45:37,167 | INFO     | all job control threads have been joined
[2026-03-05 14:46:34] 2026-03-05 13:45:37,320 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 14:46:34] 2026-03-05 13:45:37,537 | INFO     | all data control threads have been joined
[2026-03-05 14:46:34] 2026-03-05 13:45:37,617 | INFO     | number of running child processes to parent process 2216662: 1
[2026-03-05 14:46:34] 2026-03-05 13:45:37,617 | INFO     | maximum number of monitored processes: 6
[2026-03-05 14:46:34] 2026-03-05 13:45:37,617 | INFO     | aborting job monitoring since job object (job id=7038975772) has expired
[2026-03-05 14:46:34] 2026-03-05 13:45:37,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 14:46:34] 2026-03-05 13:45:37,617 | INFO     | will abort loop
[2026-03-05 14:46:34] 2026-03-05 13:45:37,684 | INFO     | all payload control threads have been joined
[2026-03-05 14:46:34] 2026-03-05 13:45:37,996 | INFO     | [job] retrieve thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,025 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,171 | INFO     | [job] control thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,543 | INFO     | [data] control thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,621 | INFO     | [job] job monitor thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,683 | INFO     | [job] validate thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,689 | INFO     | [payload] control thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,807 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,928 | INFO     | [payload] failed_post thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:38,975 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:39,104 | INFO     | [data] copytool_in thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:39,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 14:46:34] 2026-03-05 13:45:39,240 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:39,324 | INFO     | [data] copytool_out thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:39,352 | INFO     | [payload] validate_post thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:40,161 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 14:46:34] 2026-03-05 13:45:40,241 | INFO     | [job] queue monitor thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:45:44,167 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 14:46:34] 2026-03-05 13:46:07,973 | INFO     | PID=2200501 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 14:46:34] 2026-03-05 13:46:07,973 | INFO     | .. there are 44 such processes running
[2026-03-05 14:46:34] 2026-03-05 13:46:07,974 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 14:46:34] 2026-03-05 13:46:07,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 14:46:34] 2026-03-05 13:46:07,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 14:46:34] 2026-03-05 13:46:29,031 | INFO     | [monitor] cgroup control has ended
[2026-03-05 14:46:34] 2026-03-05 13:46:29,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23216232077120)>', '<ExcThread(monitor, started 23215983552256)>']
[2026-03-05 14:46:34] 2026-03-05 13:46:30,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 14:46:34] 2026-03-05 13:46:30,080 | INFO     | [monitor] control thread has ended
[2026-03-05 14:46:34] 2026-03-05 13:46:34,451 | INFO     | all workflow threads have been joined
[2026-03-05 14:46:34] 2026-03-05 13:46:34,452 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 14:46:34] 2026-03-05 13:46:34,452 | INFO     | traces error code: 0
[2026-03-05 14:46:34] 2026-03-05 13:46:34,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 14:46:34] 2026-03-05 13:46:34,677 [wrapper] ==== pilot stdout END ====
[2026-03-05 14:46:34] 2026-03-05 13:46:34,681 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 14:46:34] 2026-03-05 13:46:34,684 [wrapper] pilotpid: 2200501
[2026-03-05 14:46:34] 2026-03-05 13:46:34,686 [wrapper] Pilot exit status: 0
[2026-03-05 14:46:34] 2026-03-05 13:46:34,694 [wrapper] pandaids: 7038975772
[2026-03-05 14:46:34] 2026-03-05 13:46:34,821 [wrapper] cleanup supervisor_pilot 3462245 2200502
[2026-03-05 14:46:34] 2026-03-05 13:46:34,823 [wrapper] Test setup, not cleaning
[2026-03-05 14:46:34] 2026-03-05 13:46:34,826 [wrapper] apfmon messages muted
[2026-03-05 14:46:34] 2026-03-05 13:46:34,829 [wrapper] ==== wrapper stdout END ====
[2026-03-05 14:46:34] 2026-03-05 13:46:34,832 [wrapper] ==== wrapper stderr END ====
[2026-03-05 14:46:34]  *** Error codes and diagnostics ***
[2026-03-05 14:46:34]     "exeErrorCode": 0,
[2026-03-05 14:46:34]     "exeErrorDiag": "",
[2026-03-05 14:46:34]     "pilotErrorCode": 0,
[2026-03-05 14:46:34]     "pilotErrorDiag": "",
[2026-03-05 14:46:34]  *** Listing of results directory ***
[2026-03-05 14:46:34] total 479224
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc    584627 Mar  4 11:35 pilot3.tar.gz
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc      5111 Mar  4 11:36 queuedata.json
[2026-03-05 14:46:34] -rwx------. 1 boinc boinc     36322 Mar  4 11:37 runpilot2-wrapper.sh
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc       100 Mar  5 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 14:46:34] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 12:04 run_atlas
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc       105 Mar  5 12:04 job.xml
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc     15845 Mar  5 12:04 start_atlas.sh
[2026-03-05 14:46:34] drwxrwx--x. 2 boinc boinc      4096 Mar  5 12:04 shared
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc    597967 Mar  5 12:04 input.tar.gz
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc      6707 Mar  5 12:04 init_data.xml
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc 263342163 Mar  5 12:04 EVNT.48456453._000002.pool.root.1
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc         0 Mar  5 12:04 boinc_lockfile
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc      2608 Mar  5 12:04 pandaJob.out
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc    998505 Mar  5 12:05 agis_schedconf.cvmfs.json
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc   1521291 Mar  5 12:05 agis_ddmendpoints.agis.ALL.json
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc       445 Mar  5 12:05 workernode_map.json
[2026-03-05 14:46:34] drwx------. 5 boinc boinc      4096 Mar  5 12:05 pilot3
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc 220059817 Mar  5 14:45 HITS.48849014._000078.pool.root.1
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc       529 Mar  5 14:45 boinc_task_state.xml
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc      1033 Mar  5 14:45 memory_monitor_summary.json
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc    331548 Mar  5 14:45 log.48849014._000078.job.log.tgz.1
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc      6346 Mar  5 14:45 heartbeat.json
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc        95 Mar  5 14:46 pilot_heartbeat.json
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc        27 Mar  5 14:46 wrapper_checkpoint.txt
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc      5363 Mar  5 14:46 pilotlog.txt
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc      8192 Mar  5 14:46 boinc_mmap_file
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc   1362060 Mar  5 14:46 log.48849014._000078.job.log.1
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc       357 Mar  5 14:46 output.list
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc       620 Mar  5 14:46 runtime_log
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc   1710080 Mar  5 14:46 result.tar.gz
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc      9221 Mar  5 14:46 runtime_log.err
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc       663 Mar  5 14:46 9tbNDmemyH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4AILDmSF73Dm.diag
[2026-03-05 14:46:34] -rw-r--r--. 1 boinc boinc     20951 Mar  5 14:46 stderr.txt
[2026-03-05 14:46:34] HITS file was successfully produced:
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc 220059817 Mar  5 14:45 shared/HITS.pool.root.1
[2026-03-05 14:46:34]  *** Contents of shared directory: ***
[2026-03-05 14:46:34] total 474356
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc     15845 Mar  5 12:04 start_atlas.sh
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc    597967 Mar  5 12:04 input.tar.gz
[2026-03-05 14:46:34] -rw-r--r--. 2 boinc boinc 263342163 Mar  5 12:04 ATLAS.root_0
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc 220059817 Mar  5 14:45 HITS.pool.root.1
[2026-03-05 14:46:34] -rw-------. 1 boinc boinc   1710080 Mar  5 14:46 result.tar.gz
14:46:46 (2187252): run_atlas exited; CPU time 37399.619263
14:46:46 (2187252): called boinc_finish(0)

</stderr_txt>
]]>

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