Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:53 (3028908): wrapper (7.7.26015): starting
11:13:53 (3028908): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 11:13:53] Arguments: --nthreads 8
[2026-03-04 11:13:53] Threads: 8
[2026-03-04 11:13:53] Checking for CVMFS
[2026-03-04 11:13:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 11:13:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 11:13:54] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 11:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 11:13:55] 2.13.3.0 5644 90045 420096 156880 1 978 26407657 32935936 21029 16776704 0 246169185 99.588 329596384 37101 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-04 11:13:55] CVMFS is ok
[2026-03-04 11:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:13:55] Further information can be found at the LHC@home message board.
[2026-03-04 11:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:13:55] Checking for apptainer binary...
[2026-03-04 11:13:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 11:13:55] Running /usr/bin/apptainer --version
[2026-03-04 11:13:55] apptainer version 1.4.5-2.el9
[2026-03-04 11:13:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:13:56] c6-2-29-4.aglt2.org
[2026-03-04 11:13:56] apptainer works
[2026-03-04 11:13:56] Set ATHENA_PROC_NUMBER=8
[2026-03-04 11:13:56] Set ATHENA_CORE_NUMBER=8
[2026-03-04 11:13:56] Starting ATLAS job with PandaID=7037673954
[2026-03-04 11:13:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 18:32:12]  *** The last 200 lines of the pilot log: ***
[2026-03-04 18:32:12] 2026-03-04 23:31:31,561 | INFO     | job 7037673954 has state=finished
[2026-03-04 18:32:12] 2026-03-04 23:31:31,562 | INFO     | preparing for final server update for job 7037673954 in state='finished'
[2026-03-04 18:32:12] 2026-03-04 23:31:31,562 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7037673954/jobReport.json
[2026-03-04 18:32:12] 2026-03-04 23:31:31,565 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-03-04 18:32:12] 2026-03-04 23:31:31,566 | INFO     | this job has now completed (state=finished)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,566 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,566 | INFO     | log transfer has been attempted: DONE
[2026-03-04 18:32:12] 2026-03-04 23:31:31,566 | INFO     | job 7037673954 has finished - writing final server update
[2026-03-04 18:32:12] 2026-03-04 23:31:31,567 | INFO     | total number of processed events: 400 (read)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,665 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7037673954/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,666 | INFO     | extracted standard info from prmon json
[2026-03-04 18:32:12] 2026-03-04 23:31:31,666 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 18:32:12] 2026-03-04 23:31:31,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 18:32:12] 2026-03-04 23:31:31,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 18:32:12] 2026-03-04 23:31:31,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 18:32:12] 2026-03-04 23:31:31,709 | INFO     | fitting pss+swap vs Time
[2026-03-04 18:32:12] 2026-03-04 23:31:31,710 | INFO     | sum of square deviations: 24480933644.759933
[2026-03-04 18:32:12] 2026-03-04 23:31:31,744 | INFO     | sum of deviations: -53559932860.57347
[2026-03-04 18:32:12] 2026-03-04 23:31:31,744 | INFO     | mean x: 1772653999.4662004
[2026-03-04 18:32:12] 2026-03-04 23:31:31,744 | INFO     | mean y: 2514299.132867133
[2026-03-04 18:32:12] 2026-03-04 23:31:31,744 | INFO     | intersect: 3880766271.633068
[2026-03-04 18:32:12] 2026-03-04 23:31:31,777 | INFO     | chi2: 2.798748548857346
[2026-03-04 18:32:12] 2026-03-04 23:31:31,778 | INFO     | sum of square deviations: 23634913663.660316
[2026-03-04 18:32:12] 2026-03-04 23:31:31,814 | INFO     | sum of deviations: -27034885049.264107
[2026-03-04 18:32:12] 2026-03-04 23:31:31,815 | INFO     | mean x: 1772653846.971698
[2026-03-04 18:32:12] 2026-03-04 23:31:31,815 | INFO     | mean y: 2519035.0613207547
[2026-03-04 18:32:12] 2026-03-04 23:31:31,815 | INFO     | intersect: 2030175817.1844587
[2026-03-04 18:32:12] 2026-03-04 23:31:31,815 | INFO     | chi2: 2.1132432458791737
[2026-03-04 18:32:12] 2026-03-04 23:31:31,815 | INFO     | current chi2=2.1132432458791737 (change=24.493279442986964 %)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,816 | INFO     | right removable region: 423
[2026-03-04 18:32:12] 2026-03-04 23:31:31,816 | INFO     | sum of square deviations: 23634817832.60142
[2026-03-04 18:32:12] 2026-03-04 23:31:31,824 | INFO     | sum of deviations: -138468548981.49533
[2026-03-04 18:32:12] 2026-03-04 23:31:31,824 | INFO     | mean x: 1772654151.9693396
[2026-03-04 18:32:12] 2026-03-04 23:31:31,824 | INFO     | mean y: 2529543.7311320757
[2026-03-04 18:32:12] 2026-03-04 23:31:31,825 | INFO     | intersect: 10387921553.422827
[2026-03-04 18:32:12] 2026-03-04 23:31:31,825 | INFO     | chi2: 0.9225074276637614
[2026-03-04 18:32:12] 2026-03-04 23:31:31,825 | INFO     | current chi2=0.9225074276637614 (change=67.03857414985008 %)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,830 | INFO     | sum of square deviations: 22808474682.31503
[2026-03-04 18:32:12] 2026-03-04 23:31:31,838 | INFO     | sum of deviations: -142234904611.05002
[2026-03-04 18:32:12] 2026-03-04 23:31:31,838 | INFO     | mean x: 1772654304.4677804
[2026-03-04 18:32:12] 2026-03-04 23:31:31,838 | INFO     | mean y: 2530228.107398568
[2026-03-04 18:32:12] 2026-03-04 23:31:31,838 | INFO     | intersect: 11056900124.216154
[2026-03-04 18:32:12] 2026-03-04 23:31:31,839 | INFO     | chi2: 0.8962801406251326
[2026-03-04 18:32:12] 2026-03-04 23:31:31,839 | INFO     | current chi2=0.8962801406251326 (change=2.843043454408712 %)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,839 | INFO     | left removable region: 20
[2026-03-04 18:32:12] 2026-03-04 23:31:31,839 | INFO     | sum of square deviations: 20294095426.297626
[2026-03-04 18:32:12] 2026-03-04 23:31:31,847 | INFO     | sum of deviations: -101025980951.34993
[2026-03-04 18:32:12] 2026-03-04 23:31:31,847 | INFO     | mean x: 1772654426.4665012
[2026-03-04 18:32:12] 2026-03-04 23:31:31,847 | INFO     | mean y: 2532537.7518610423
[2026-03-04 18:32:12] 2026-03-04 23:31:31,847 | INFO     | intersect: 8826978691.162025
[2026-03-04 18:32:12] 2026-03-04 23:31:31,848 | INFO     | chi2: 0.1933591882703202
[2026-03-04 18:32:12] 2026-03-04 23:31:31,848 | INFO     | current memory leak: -4.98 B/s (using 403 data points, chi2=0.19)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | could have reported an average CPU frequency of 2902 MHz (18 samples)
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | ..............................
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | . Timing measurements:
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | . get job = 0 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | . initial setup = 21 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,849 | INFO     | . payload setup = 23 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,854 | INFO     | . stage-in = 0 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,854 | INFO     | . payload execution = 26151 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,854 | INFO     | . stage-out = 5 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,854 | INFO     | . log creation = 0 s
[2026-03-04 18:32:12] 2026-03-04 23:31:31,854 | INFO     | ..............................
[2026-03-04 18:32:12] 2026-03-04 23:31:32,407 | INFO     | 
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | job summary report
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | --------------------------------------------------
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | PanDA job id: 7037673954
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | task id: 48700874
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | errors: (none)
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | pilot state: finished 
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | transexitcode: 0
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | exeerrorcode: 0
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | exeerrordiag: 
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | exitcode: 0
[2026-03-04 18:32:12] 2026-03-04 23:31:32,409 | INFO     | exitmsg: OK
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | cpuconsumptiontime: 35356 s
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | nevents: 400
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | neventsw: 0
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | pid: 3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | pgrp: 3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | corecount: 8
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | event service: False
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | sizes: {0: 2285954, 1: 2286639, 2: 2287100, 13: 2287100, 26179: 2323056, 26180: 2323055, 26186: 2341002, 26189: 2341058, 26190: 2341252}
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | --------------------------------------------------
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | 
[2026-03-04 18:32:12] 2026-03-04 23:31:32,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-03-04 18:32:12] 2026-03-04 23:31:32,588 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,588 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,588 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | job 7037673954 has completed (purged errors)
[2026-03-04 18:32:12] 2026-03-04 23:31:32,590 | INFO     | overall cleanup function is called
[2026-03-04 18:32:12] 2026-03-04 23:31:33,599 | INFO     | --- collectZombieJob: --- 10, [3047765]
[2026-03-04 18:32:12] 2026-03-04 23:31:33,600 | INFO     | zombie collector waiting for pid 3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:33,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 18:32:12] 2026-03-04 23:31:33,600 | INFO     | collected zombie processes
[2026-03-04 18:32:12] 2026-03-04 23:31:33,600 | INFO     | will attempt to kill all subprocesses of pid=3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:33,951 | INFO     | PID=3037869 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 18:32:12] 2026-03-04 23:31:33,956 | INFO     | .. there are 30 such processes running
[2026-03-04 18:32:12] 2026-03-04 23:31:34,715 | INFO     | process IDs to be killed: [3047765] (in reverse order)
[2026-03-04 18:32:12] 2026-03-04 23:31:34,962 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 18:32:12] 2026-03-04 23:31:34,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 18:32:12] 2026-03-04 23:31:34,979 | INFO     | did not find any defunct processes belonging to 3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:35,028 | INFO     | did not find any defunct processes belonging to 3047765
[2026-03-04 18:32:12] 2026-03-04 23:31:35,028 | INFO     | ready for new job
[2026-03-04 18:32:12] 2026-03-04 23:31:35,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 18:32:12] 2026-03-04 23:31:35,032 | INFO     | **************************************
[2026-03-04 18:32:12] 2026-03-04 23:31:35,032 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 18:32:12] 2026-03-04 23:31:35,032 | INFO     | **************************************
[2026-03-04 18:32:12] 2026-03-04 23:31:35,032 | INFO     | 
[2026-03-04 18:32:12] 2026-03-04 23:31:35,097 | INFO     | architecture information:
[2026-03-04 18:32:12] 2026-03-04 23:31:35,104 | INFO     | executing command: cat /etc/os-release
[2026-03-04 18:32:12] 2026-03-04 23:31:35,254 | INFO     | cat /etc/os-release:
[2026-03-04 18:32:12] NAME="CentOS Linux"
[2026-03-04 18:32:12] VERSION="7 (Core)"
[2026-03-04 18:32:12] ID="centos"
[2026-03-04 18:32:12] ID_LIKE="rhel fedora"
[2026-03-04 18:32:12] VERSION_ID="7"
[2026-03-04 18:32:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 18:32:12] ANSI_COLOR="0;31"
[2026-03-04 18:32:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 18:32:12] HOME_URL="https://www.centos.org/"
[2026-03-04 18:32:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 18:32:12] 
[2026-03-04 18:32:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 18:32:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 18:32:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 18:32:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 18:32:12] 
[2026-03-04 18:32:12] 2026-03-04 23:31:35,254 | INFO     | **************************************
[2026-03-04 18:32:12] 2026-03-04 23:31:35,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-03-04 18:32:12] 2026-03-04 23:31:35,876 | INFO     | sufficient remaining disk space (75711381504 B)
[2026-03-04 18:32:12] 2026-03-04 23:31:35,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 18:32:12] 2026-03-04 23:31:35,877 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 18:32:12] 2026-03-04 23:31:35,877 | INFO     | update_server=False
[2026-03-04 18:32:12] 2026-03-04 23:31:35,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 18:32:12] 2026-03-04 23:31:35,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 18:32:12] 2026-03-04 23:31:35,885 | INFO     | aborting loop
[2026-03-04 18:32:12] 2026-03-04 23:31:35,967 | INFO     | all payload control threads have been joined
[2026-03-04 18:32:12] 2026-03-04 23:31:36,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 18:32:12] 2026-03-04 23:31:36,512 | INFO     | all data control threads have been joined
[2026-03-04 18:32:12] 2026-03-04 23:31:36,883 | INFO     | [job] retrieve thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:36,895 | INFO     | [job] job monitor thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:36,899 | INFO     | all job control threads have been joined
[2026-03-04 18:32:12] 2026-03-04 23:31:36,974 | INFO     | [payload] control thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,085 | INFO     | [payload] validate_post thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,095 | INFO     | [monitor] cgroup control has ended
[2026-03-04 18:32:12] 2026-03-04 23:31:37,410 | INFO     | [payload] failed_post thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 18:32:12] 2026-03-04 23:31:37,502 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,520 | INFO     | [data] control thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 18:32:12] 2026-03-04 23:31:37,902 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:37,906 | INFO     | [job] control thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,021 | INFO     | [data] copytool_in thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,162 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,214 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,369 | INFO     | [job] validate thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,432 | INFO     | [data] copytool_out thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:38,487 | INFO     | [job] queue monitor thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:41,596 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 18:32:12] 2026-03-04 23:31:42,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543649740608)>', '<ExcThread(monitor, started 140543292053248)>']
[2026-03-04 18:32:12] 2026-03-04 23:31:47,444 | INFO     | all workflow threads have been joined
[2026-03-04 18:32:12] 2026-03-04 23:31:47,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 18:32:12] 2026-03-04 23:31:47,444 | INFO     | traces error code: 0
[2026-03-04 18:32:12] 2026-03-04 23:31:47,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 18:32:12] 2026-03-04 23:32:11,137 | INFO     | PID=3037869 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 18:32:12] 2026-03-04 23:32:11,137 | INFO     | .. there are 30 such processes running
[2026-03-04 18:32:12] 2026-03-04 23:32:11,177 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 18:32:12] 2026-03-04 23:32:11,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 18:32:12] 2026-03-04 23:32:11,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 18:32:12] 2026-03-04 23:32:11,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 18:32:12] 2026-03-04 23:32:11,178 | INFO     | [monitor] control thread has ended
[2026-03-04 18:32:12] 2026-03-04 23:32:11,459 [wrapper] ==== pilot stdout END ====
[2026-03-04 18:32:12] 2026-03-04 23:32:11,482 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 18:32:12] 2026-03-04 23:32:11,536 [wrapper] pilotpid: 3037869
[2026-03-04 18:32:12] 2026-03-04 23:32:11,595 [wrapper] Pilot exit status: 0
[2026-03-04 18:32:12] 2026-03-04 23:32:11,696 [wrapper] pandaids: 7037673954
[2026-03-04 18:32:12] 2026-03-04 23:32:11,919 [wrapper] cleanup supervisor_pilot 4134600 3037870
[2026-03-04 18:32:12] 2026-03-04 23:32:11,955 [wrapper] Test setup, not cleaning
[2026-03-04 18:32:12] 2026-03-04 23:32:12,007 [wrapper] apfmon messages muted
[2026-03-04 18:32:12] 2026-03-04 23:32:12,037 [wrapper] ==== wrapper stdout END ====
[2026-03-04 18:32:12] 2026-03-04 23:32:12,057 [wrapper] ==== wrapper stderr END ====
[2026-03-04 18:32:12]  *** Error codes and diagnostics ***
[2026-03-04 18:32:12]     "exeErrorCode": 0,
[2026-03-04 18:32:12]     "exeErrorDiag": "",
[2026-03-04 18:32:12]     "pilotErrorCode": 0,
[2026-03-04 18:32:12]     "pilotErrorDiag": "",
[2026-03-04 18:32:12]  *** Listing of results directory ***
[2026-03-04 18:32:12] total 340324
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas    584627 Mar  4 03:44 pilot3.tar.gz
[2026-03-04 18:32:12] -rwx------. 1 boincer umatlas     36322 Mar  4 03:47 runpilot2-wrapper.sh
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas      5111 Mar  4 03:50 queuedata.json
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas       100 Mar  4 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 18:32:12] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  4 11:13 run_atlas
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas       105 Mar  4 11:13 job.xml
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas 188253587 Mar  4 11:13 EVNT.48700872._000084.pool.root.1
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 11:13 start_atlas.sh
[2026-03-04 18:32:12] drwxrwx--x. 2 boincer umatlas      4096 Mar  4 11:13 shared
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas    597952 Mar  4 11:13 input.tar.gz
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas         0 Mar  4 11:13 boinc_lockfile
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas      2550 Mar  4 11:13 pandaJob.out
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas        57 Mar  4 11:13 setup.sh.local
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas    997352 Mar  4 11:14 agis_schedconf.cvmfs.json
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas       441 Mar  4 11:14 workernode_map.json
[2026-03-04 18:32:12] drwx------. 5 boincer umatlas      4096 Mar  4 11:14 pilot3
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas      6842 Mar  4 18:29 init_data.xml
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas 149251868 Mar  4 18:29 HITS.48700874._002164.pool.root.1
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas       530 Mar  4 18:30 boinc_task_state.xml
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas      1040 Mar  4 18:31 memory_monitor_summary.json
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas   1521291 Mar  4 18:31 agis_ddmendpoints.agis.ALL.json
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas    589539 Mar  4 18:31 log.48700874._002164.job.log.tgz.1
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas      6385 Mar  4 18:31 heartbeat.json
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas        28 Mar  4 18:32 wrapper_checkpoint.txt
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas      8192 Mar  4 18:32 boinc_mmap_file
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas        95 Mar  4 18:32 pilot_heartbeat.json
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas       823 Mar  4 18:32 pilotlog.txt
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas   2938601 Mar  4 18:32 log.48700874._002164.job.log.1
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas       357 Mar  4 18:32 output.list
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas       620 Mar  4 18:32 runtime_log
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas   3543040 Mar  4 18:32 result.tar.gz
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas      9347 Mar  4 18:32 runtime_log.err
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas       657 Mar  4 18:32 LaHLDmi4wH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkvHLDmAdWFim.diag
[2026-03-04 18:32:12] -rw-r--r--. 1 boincer umatlas     21448 Mar  4 18:32 stderr.txt
[2026-03-04 18:32:12] HITS file was successfully produced:
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas 149251868 Mar  4 18:29 shared/HITS.pool.root.1
[2026-03-04 18:32:12]  *** Contents of shared directory: ***
[2026-03-04 18:32:12] total 333664
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas 188253587 Mar  4 11:13 ATLAS.root_0
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 11:13 start_atlas.sh
[2026-03-04 18:32:12] -rw-r--r--. 2 boincer umatlas    597952 Mar  4 11:13 input.tar.gz
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas 149251868 Mar  4 18:29 HITS.pool.root.1
[2026-03-04 18:32:12] -rw-------. 1 boincer umatlas   3543040 Mar  4 18:32 result.tar.gz
18:32:14 (3028908): run_atlas exited; CPU time 36297.992260
18:32:14 (3028908): called boinc_finish(0)

</stderr_txt>
]]>

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