Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:51:13 (956689): wrapper (7.7.26015): starting
22:51:13 (956689): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 22:51:13] Arguments: --nthreads 4
[2026-03-04 22:51:13] Threads: 4
[2026-03-04 22:51:13] Checking for CVMFS
[2026-03-04 22:51:13] No cvmfs_config command found, will try listing directly
[2026-03-04 22:51:13] CVMFS is ok
[2026-03-04 22:51:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 22:51:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 22:51:13] Further information can be found at the LHC@home message board.
[2026-03-04 22:51:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 22:51:13] Checking for apptainer binary...
[2026-03-04 22:51:13] which: no apptainer in ((null))
[2026-03-04 22:51:13] apptainer is not installed, using version from CVMFS
[2026-03-04 22:51:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 22:51:13] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-03-04 22:51:13] apptainer works
[2026-03-04 22:51:13] Set ATHENA_PROC_NUMBER=4
[2026-03-04 22:51:13] Set ATHENA_CORE_NUMBER=4
[2026-03-04 22:51:13] Starting ATLAS job with PandaID=7038513168
[2026-03-04 22:51:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 01:25:04]  *** The last 200 lines of the pilot log: ***
[2026-03-05 01:25:04] 2026-03-05 00:23:29,311 | INFO     | job 7038513168 has state=finished
[2026-03-05 01:25:04] 2026-03-05 00:23:29,311 | INFO     | preparing for final server update for job 7038513168 in state='finished'
[2026-03-05 01:25:04] 2026-03-05 00:23:29,312 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7038513168/jobReport.json
[2026-03-05 01:25:04] 2026-03-05 00:23:29,314 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/0/workernode_map.json
[2026-03-05 01:25:04] 2026-03-05 00:23:29,314 | INFO     | this job has now completed (state=finished)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,314 | INFO     | log transfer has been attempted: DONE
[2026-03-05 01:25:04] 2026-03-05 00:23:29,315 | INFO     | job 7038513168 has finished - writing final server update
[2026-03-05 01:25:04] 2026-03-05 00:23:29,317 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_14486/.job.ad'
[2026-03-05 01:25:04] 2026-03-05 00:23:29,318 | INFO     | total number of processed events: 400 (read)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,342 | INFO     | using path: /var/lib/boinc/var/slot60/slots/0/PanDA_Pilot-7038513168/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,343 | INFO     | extracted standard info from prmon json
[2026-03-05 01:25:04] 2026-03-05 00:23:29,343 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 01:25:04] 2026-03-05 00:23:29,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 01:25:04] 2026-03-05 00:23:29,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 01:25:04] 2026-03-05 00:23:29,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 01:25:04] 2026-03-05 00:23:29,346 | INFO     | fitting pss+swap vs Time
[2026-03-05 01:25:04] 2026-03-05 00:23:29,346 | INFO     | sum of square deviations: 1025693650.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,347 | INFO     | sum of deviations: 20628566298.000004
[2026-03-05 01:25:04] 2026-03-05 00:23:29,347 | INFO     | mean x: 1772665653.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,347 | INFO     | mean y: 2298971.7315436243
[2026-03-05 01:25:04] 2026-03-05 00:23:29,348 | INFO     | intersect: -35649233966.09835
[2026-03-05 01:25:04] 2026-03-05 00:23:29,348 | INFO     | chi2: 1.395564795304466
[2026-03-05 01:25:04] 2026-03-05 00:23:29,348 | INFO     | sum of square deviations: 925859220.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,349 | INFO     | sum of deviations: 19782227593.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,349 | INFO     | mean x: 1772665500.5
[2026-03-05 01:25:04] 2026-03-05 00:23:29,349 | INFO     | mean y: 2297678.861111111
[2026-03-05 01:25:04] 2026-03-05 00:23:29,349 | INFO     | intersect: -37873085121.93905
[2026-03-05 01:25:04] 2026-03-05 00:23:29,350 | INFO     | chi2: 1.3969049938396563
[2026-03-05 01:25:04] 2026-03-05 00:23:29,350 | INFO     | current chi2=1.3969049938396563 (change=-0.09603269871090418 %)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,350 | INFO     | right removable region: 143
[2026-03-05 01:25:04] 2026-03-05 00:23:29,350 | INFO     | sum of square deviations: 925859220.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | sum of deviations: 583437519.5000001
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | mean x: 1772665805.5
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | mean y: 2329098.826388889
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | intersect: -1114730296.513855
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | chi2: 0.001652378446926124
[2026-03-05 01:25:04] 2026-03-05 00:23:29,351 | INFO     | current chi2=0.001652378446926124 (change=99.88159786973088 %)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,352 | INFO     | sum of square deviations: 832722590.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,352 | INFO     | sum of deviations: 561709533.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | mean x: 1772665958.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | mean y: 2329132.503597122
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | intersect: -1193415259.915465
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | chi2: 0.0016242760780881573
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | current chi2=0.0016242760780881573 (change=1.7007223066994666 %)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | left removable region: 20
[2026-03-05 01:25:04] 2026-03-05 00:23:29,353 | INFO     | sum of square deviations: 576985702.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,354 | INFO     | sum of deviations: 1112852951.0000002
[2026-03-05 01:25:04] 2026-03-05 00:23:29,354 | INFO     | mean x: 1772666080.0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,354 | INFO     | mean y: 2327367.300813008
[2026-03-05 01:25:04] 2026-03-05 00:23:29,354 | INFO     | intersect: -3416677074.9714885
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | chi2: 0.0005759310950844325
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | current memory leak: 1.93 B/s (using 123 data points, chi2=0.00)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | could have reported an average CPU frequency of 2667 MHz (9 samples)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | ..............................
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | . Timing measurements:
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | . get job = 0 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,355 | INFO     | . initial setup = 14 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | . payload setup = 14 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | . stage-in = 0 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | . payload execution = 9077 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | . stage-out = 0 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | . log creation = 0 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,356 | INFO     | ..............................
[2026-03-05 01:25:04] 2026-03-05 00:23:29,450 | INFO     | 
[2026-03-05 01:25:04] 2026-03-05 00:23:29,450 | INFO     | job summary report
[2026-03-05 01:25:04] 2026-03-05 00:23:29,450 | INFO     | --------------------------------------------------
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | PanDA job id: 7038513168
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | task id: 48955010
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | errors: (none)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | pilot state: finished 
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | transexitcode: 0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | exeerrorcode: 0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | exeerrordiag: 
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | exitcode: 0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | exitmsg: OK
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | cpuconsumptiontime: 34383 s
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | nevents: 400
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | neventsw: 0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,451 | INFO     | pid: 970959
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | pgrp: 970959
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | corecount: 4
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | event service: False
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | sizes: {0: 2295326, 1: 2295787, 9095: 2324524, 9096: 2324523, 9097: 2333599, 9098: 2333655, 9099: 2334041}
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | --------------------------------------------------
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | 
[2026-03-05 01:25:04] 2026-03-05 00:23:29,452 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/0
[2026-03-05 01:25:04] 2026-03-05 00:23:29,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 01:25:04] 2026-03-05 00:23:29,487 | INFO     | job 7038513168 has completed (purged errors)
[2026-03-05 01:25:04] 2026-03-05 00:23:29,487 | INFO     | overall cleanup function is called
[2026-03-05 01:25:04] 2026-03-05 00:23:30,497 | INFO     | --- collectZombieJob: --- 10, [970959]
[2026-03-05 01:25:04] 2026-03-05 00:23:30,497 | INFO     | zombie collector waiting for pid 970959
[2026-03-05 01:25:04] 2026-03-05 00:23:30,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 01:25:04] 2026-03-05 00:23:30,498 | INFO     | collected zombie processes
[2026-03-05 01:25:04] 2026-03-05 00:23:30,498 | INFO     | will attempt to kill all subprocesses of pid=970959
[2026-03-05 01:25:04] 2026-03-05 00:23:31,322 | INFO     | process IDs to be killed: [970959] (in reverse order)
[2026-03-05 01:25:04] 2026-03-05 00:23:31,681 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 01:25:04] 2026-03-05 00:23:31,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 01:25:04] 2026-03-05 00:23:31,718 | INFO     | did not find any defunct processes belonging to 970959
[2026-03-05 01:25:04] 2026-03-05 00:23:31,752 | INFO     | did not find any defunct processes belonging to 970959
[2026-03-05 01:25:04] 2026-03-05 00:23:31,752 | INFO     | ready for new job
[2026-03-05 01:25:04] 2026-03-05 00:23:31,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 01:25:04] 2026-03-05 00:23:31,755 | INFO     | **************************************
[2026-03-05 01:25:04] 2026-03-05 00:23:31,755 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 01:25:04] 2026-03-05 00:23:31,755 | INFO     | **************************************
[2026-03-05 01:25:04] 2026-03-05 00:23:31,755 | INFO     | 
[2026-03-05 01:25:04] 2026-03-05 00:23:31,764 | INFO     | architecture information:
[2026-03-05 01:25:04] 2026-03-05 00:23:31,765 | INFO     | executing command: cat /etc/os-release
[2026-03-05 01:25:04] 2026-03-05 00:23:31,789 | INFO     | cat /etc/os-release:
[2026-03-05 01:25:04] NAME="CentOS Linux"
[2026-03-05 01:25:04] VERSION="7 (Core)"
[2026-03-05 01:25:04] ID="centos"
[2026-03-05 01:25:04] ID_LIKE="rhel fedora"
[2026-03-05 01:25:04] VERSION_ID="7"
[2026-03-05 01:25:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 01:25:04] ANSI_COLOR="0;31"
[2026-03-05 01:25:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 01:25:04] HOME_URL="https://www.centos.org/"
[2026-03-05 01:25:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 01:25:04] 
[2026-03-05 01:25:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 01:25:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 01:25:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 01:25:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 01:25:04] 
[2026-03-05 01:25:04] 2026-03-05 00:23:31,789 | INFO     | **************************************
[2026-03-05 01:25:04] 2026-03-05 00:23:32,291 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/0
[2026-03-05 01:25:04] 2026-03-05 00:23:32,314 | INFO     | sufficient remaining disk space (256752222208 B)
[2026-03-05 01:25:04] 2026-03-05 00:23:32,315 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 01:25:04] 2026-03-05 00:23:32,315 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 01:25:04] 2026-03-05 00:23:32,315 | INFO     | update_server=False
[2026-03-05 01:25:04] 2026-03-05 00:23:32,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 01:25:04] 2026-03-05 00:23:32,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 01:25:04] 2026-03-05 00:23:32,459 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 01:25:04] 2026-03-05 00:23:32,459 | INFO     | aborting loop
[2026-03-05 01:25:04] 2026-03-05 00:23:32,735 | INFO     | all payload control threads have been joined
[2026-03-05 01:25:04] 2026-03-05 00:23:32,800 | INFO     | all data control threads have been joined
[2026-03-05 01:25:04] 2026-03-05 00:23:33,319 | INFO     | all job control threads have been joined
[2026-03-05 01:25:04] 2026-03-05 00:23:33,320 | INFO     | [job] retrieve thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,464 | INFO     | [job] job monitor thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,551 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,722 | INFO     | [data] copytool_in thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,740 | INFO     | [payload] control thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,805 | INFO     | [data] control thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:33,849 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 01:25:04] 2026-03-05 00:23:34,322 | INFO     | [data] copytool_out thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,324 | INFO     | [job] control thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,454 | INFO     | [payload] failed_post thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 01:25:04] 2026-03-05 00:23:34,474 | INFO     | [job] validate thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,773 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:34,826 | INFO     | [payload] validate_post thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:35,465 | INFO     | [job] queue monitor thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:38,256 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:23:43,213 | INFO     | job.realtimelogging is not enabled
[2026-03-05 01:25:04] 2026-03-05 00:23:44,218 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 01:25:04] 2026-03-05 00:24:02,270 | INFO     | PID=965494 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 01:25:04] 2026-03-05 00:24:02,270 | INFO     | .. there are 23 such processes running
[2026-03-05 01:25:04] 2026-03-05 00:24:02,271 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 01:25:04] 2026-03-05 00:24:02,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 01:25:04] 2026-03-05 00:24:02,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 01:25:04] 2026-03-05 00:24:03,294 | INFO     | [monitor] cgroup control has ended
[2026-03-05 01:25:04] 2026-03-05 00:24:04,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23411546031936)>', '<ExcThread(monitor, started 23411301811968)>']
[2026-03-05 01:25:04] 2026-03-05 00:24:04,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 01:25:04] 2026-03-05 00:24:04,281 | INFO     | [monitor] control thread has ended
[2026-03-05 01:25:04] 2026-03-05 00:24:09,088 | INFO     | all workflow threads have been joined
[2026-03-05 01:25:04] 2026-03-05 00:24:09,088 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 01:25:04] 2026-03-05 00:24:09,089 | INFO     | traces error code: 0
[2026-03-05 01:25:04] 2026-03-05 00:24:09,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 01:25:04] 2026-03-05 00:24:09,309 [wrapper] ==== pilot stdout END ====
[2026-03-05 01:25:04] 2026-03-05 00:24:09,313 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 01:25:04] 2026-03-05 00:24:09,318 [wrapper] pilotpid: 965494
[2026-03-05 01:25:04] 2026-03-05 00:24:09,323 [wrapper] Pilot exit status: 0
[2026-03-05 01:25:04] 2026-03-05 00:24:09,339 [wrapper] pandaids: 7038513168
[2026-03-05 01:25:04] 2026-03-05 00:24:09,551 [wrapper] cleanup supervisor_pilot 1424527 965495
[2026-03-05 01:25:04] 2026-03-05 00:24:09,556 [wrapper] Test setup, not cleaning
[2026-03-05 01:25:04] 2026-03-05 00:24:09,560 [wrapper] apfmon messages muted
[2026-03-05 01:25:04] 2026-03-05 00:24:09,564 [wrapper] ==== wrapper stdout END ====
[2026-03-05 01:25:04] 2026-03-05 00:24:09,570 [wrapper] ==== wrapper stderr END ====
[2026-03-05 01:25:04]  *** Error codes and diagnostics ***
[2026-03-05 01:25:04]     "exeErrorCode": 0,
[2026-03-05 01:25:04]     "exeErrorDiag": "",
[2026-03-05 01:25:04]     "pilotErrorCode": 0,
[2026-03-05 01:25:04]     "pilotErrorDiag": "",
[2026-03-05 01:25:04]  *** Listing of results directory ***
[2026-03-05 01:25:04] total 619444
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc    584627 Mar  4 14:58 pilot3.tar.gz
[2026-03-05 01:25:04] -rwx------. 1 boinc boinc     36322 Mar  4 15:56 runpilot2-wrapper.sh
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc      5111 Mar  4 15:59 queuedata.json
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc       100 Mar  4 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 01:25:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 22:51 run_atlas
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc       105 Mar  4 22:51 job.xml
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc 442642920 Mar  4 22:51 EVNT.46701403._001027.pool.root.1
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc      6613 Mar  4 22:51 init_data.xml
[2026-03-05 01:25:04] drwxrwx--x. 2 boinc boinc      4096 Mar  4 22:51 shared
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc    597947 Mar  4 22:51 input.tar.gz
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc     15845 Mar  4 22:51 start_atlas.sh
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc         0 Mar  4 22:51 boinc_lockfile
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc      2560 Mar  4 22:51 pandaJob.out
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc    997757 Mar  4 22:51 agis_schedconf.cvmfs.json
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc   1521291 Mar  4 22:51 agis_ddmendpoints.agis.ALL.json
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc       443 Mar  4 22:51 workernode_map.json
[2026-03-05 01:25:04] drwx------. 5 boinc boinc      4096 Mar  4 22:51 pilot3
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc 184465263 Mar  5 01:22 HITS.48955010._001344.pool.root.1
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc       530 Mar  5 01:22 boinc_task_state.xml
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc        95 Mar  5 01:23 pilot_heartbeat.json
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc      1030 Mar  5 01:23 memory_monitor_summary.json
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc    363755 Mar  5 01:23 log.48955010._001344.job.log.tgz.1
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc      6354 Mar  5 01:23 heartbeat.json
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc      4902 Mar  5 01:24 pilotlog.txt
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc   1269096 Mar  5 01:24 log.48955010._001344.job.log.1
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc       357 Mar  5 01:24 output.list
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc       620 Mar  5 01:24 runtime_log
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc   1648640 Mar  5 01:24 result.tar.gz
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc       663 Mar  5 01:24 x1OKDmyo2H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZmILDmDpdQYo.diag
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc      9204 Mar  5 01:24 runtime_log.err
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc        27 Mar  5 01:25 wrapper_checkpoint.txt
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc      8192 Mar  5 01:25 boinc_mmap_file
[2026-03-05 01:25:04] -rw-r--r--. 1 boinc boinc     21095 Mar  5 01:25 stderr.txt
[2026-03-05 01:25:04] HITS file was successfully produced:
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc 184465263 Mar  5 01:22 shared/HITS.pool.root.1
[2026-03-05 01:25:04]  *** Contents of shared directory: ***
[2026-03-05 01:25:04] total 614636
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc 442642920 Mar  4 22:51 ATLAS.root_0
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc    597947 Mar  4 22:51 input.tar.gz
[2026-03-05 01:25:04] -rw-r--r--. 2 boinc boinc     15845 Mar  4 22:51 start_atlas.sh
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc 184465263 Mar  5 01:22 HITS.pool.root.1
[2026-03-05 01:25:04] -rw-------. 1 boinc boinc   1648640 Mar  5 01:24 result.tar.gz
01:25:06 (956689): run_atlas exited; CPU time 34968.368484
01:25:06 (956689): called boinc_finish(0)

</stderr_txt>
]]>

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