Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:44 (1872734): wrapper (7.7.26015): starting
13:21:44 (1872734): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 13:21:44] Arguments: --nthreads 4
[2026-03-09 13:21:44] Threads: 4
[2026-03-09 13:21:44] Checking for CVMFS
[2026-03-09 13:21:44] No cvmfs_config command found, will try listing directly
[2026-03-09 13:21:44] CVMFS is ok
[2026-03-09 13:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 13:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 13:21:45] Further information can be found at the LHC@home message board.
[2026-03-09 13:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 13:21:45] Checking for apptainer binary...
[2026-03-09 13:21:45] which: no apptainer in ((null))
[2026-03-09 13:21:45] apptainer is not installed, using version from CVMFS
[2026-03-09 13:21:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 13:21:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-09 13:21:45] apptainer works
[2026-03-09 13:21:45] Set ATHENA_PROC_NUMBER=4
[2026-03-09 13:21:45] Set ATHENA_CORE_NUMBER=4
[2026-03-09 13:21:45] Starting ATLAS job with PandaID=7038495535
[2026-03-09 13:21:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:30:36 (2360559): wrapper (7.7.26015): starting
16:30:36 (2360559): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 16:30:36] Arguments: --nthreads 4
[2026-03-09 16:30:36] Threads: 4
[2026-03-09 16:30:36] This job has been restarted, cleaning up previous attempt
[2026-03-09 16:30:37] Checking for CVMFS
[2026-03-09 16:30:37] No cvmfs_config command found, will try listing directly
[2026-03-09 16:30:37] CVMFS is ok
[2026-03-09 16:30:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 16:30:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 16:30:37] Further information can be found at the LHC@home message board.
[2026-03-09 16:30:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 16:30:37] Checking for apptainer binary...
[2026-03-09 16:30:37] which: no apptainer in ((null))
[2026-03-09 16:30:37] apptainer is not installed, using version from CVMFS
[2026-03-09 16:30:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 16:30:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-09 16:30:38] apptainer works
[2026-03-09 16:30:38] Set ATHENA_PROC_NUMBER=4
[2026-03-09 16:30:38] Set ATHENA_CORE_NUMBER=4
[2026-03-09 16:30:38] Starting ATLAS job with PandaID=7038495535
[2026-03-09 16:30:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 19:27:46]  *** The last 200 lines of the pilot log: ***
[2026-03-09 19:27:46] 2026-03-09 18:27:03,265 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,265 | INFO     | reading metadata from: /var/lib/boinc/var/slot8/slots/1/PanDA_Pilot-7038495535/jobReport.json
[2026-03-09 19:27:46] 2026-03-09 18:27:03,267 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot8/slots/1/workernode_map.json
[2026-03-09 19:27:46] 2026-03-09 18:27:03,268 | INFO     | this job has now completed (state=finished)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,268 | INFO     | log transfer has been attempted: DONE
[2026-03-09 19:27:46] 2026-03-09 18:27:03,268 | INFO     | job 7038495535 has finished - writing final server update
[2026-03-09 19:27:46] 2026-03-09 18:27:03,269 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2356785/.job.ad'
[2026-03-09 19:27:46] 2026-03-09 18:27:03,269 | INFO     | total number of processed events: 400 (read)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,293 | INFO     | using path: /var/lib/boinc/var/slot8/slots/1/PanDA_Pilot-7038495535/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,293 | INFO     | extracted standard info from prmon json
[2026-03-09 19:27:46] 2026-03-09 18:27:03,294 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 19:27:46] 2026-03-09 18:27:03,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 19:27:46] 2026-03-09 18:27:03,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 19:27:46] 2026-03-09 18:27:03,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 19:27:46] 2026-03-09 18:27:03,297 | INFO     | fitting pss+swap vs Time
[2026-03-09 19:27:46] 2026-03-09 18:27:03,298 | INFO     | sum of square deviations: 1577798794.9941938
[2026-03-09 19:27:46] 2026-03-09 18:27:03,299 | INFO     | sum of deviations: 9622240844.627913
[2026-03-09 19:27:46] 2026-03-09 18:27:03,299 | INFO     | mean x: 1773075554.5058138
[2026-03-09 19:27:46] 2026-03-09 18:27:03,299 | INFO     | mean y: 2326468.3720930233
[2026-03-09 19:27:46] 2026-03-09 18:27:03,299 | INFO     | intersect: -10810814012.72449
[2026-03-09 19:27:46] 2026-03-09 18:27:03,299 | INFO     | chi2: 1.3913157525725048
[2026-03-09 19:27:46] 2026-03-09 18:27:03,300 | INFO     | sum of square deviations: 1444159384.9940135
[2026-03-09 19:27:46] 2026-03-09 18:27:03,301 | INFO     | sum of deviations: 9350366228.634735
[2026-03-09 19:27:46] 2026-03-09 18:27:03,301 | INFO     | mean x: 1773075402.0059881
[2026-03-09 19:27:46] 2026-03-09 18:27:03,301 | INFO     | mean y: 2326158.365269461
[2026-03-09 19:27:46] 2026-03-09 18:27:03,301 | INFO     | intersect: -11477642418.516203
[2026-03-09 19:27:46] 2026-03-09 18:27:03,301 | INFO     | chi2: 1.3923345405931795
[2026-03-09 19:27:46] 2026-03-09 18:27:03,302 | INFO     | current chi2=1.3923345405931795 (change=-0.0732247887505741 %)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,302 | INFO     | right removable region: 166
[2026-03-09 19:27:46] 2026-03-09 18:27:03,302 | INFO     | sum of square deviations: 1444158774.9940135
[2026-03-09 19:27:46] 2026-03-09 18:27:03,303 | INFO     | sum of deviations: -12237098701.15569
[2026-03-09 19:27:46] 2026-03-09 18:27:03,303 | INFO     | mean x: 1773075707.0059881
[2026-03-09 19:27:46] 2026-03-09 18:27:03,303 | INFO     | mean y: 2351028.155688623
[2026-03-09 19:27:46] 2026-03-09 18:27:03,303 | INFO     | intersect: 15026531753.258873
[2026-03-09 19:27:46] 2026-03-09 18:27:03,304 | INFO     | chi2: 0.03573919685934188
[2026-03-09 19:27:46] 2026-03-09 18:27:03,304 | INFO     | current chi2=0.03573919685934188 (change=97.43126628205991 %)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,304 | INFO     | sum of square deviations: 1318286342.493832
[2026-03-09 19:27:46] 2026-03-09 18:27:03,305 | INFO     | sum of deviations: -11744342462.234556
[2026-03-09 19:27:46] 2026-03-09 18:27:03,305 | INFO     | mean x: 1773075859.506173
[2026-03-09 19:27:46] 2026-03-09 18:27:03,305 | INFO     | mean y: 2350410.234567901
[2026-03-09 19:27:46] 2026-03-09 18:27:03,305 | INFO     | intersect: 15798319339.237415
[2026-03-09 19:27:46] 2026-03-09 18:27:03,306 | INFO     | chi2: 0.03341003980827459
[2026-03-09 19:27:46] 2026-03-09 18:27:03,306 | INFO     | current chi2=0.03341003980827459 (change=6.517093991323073 %)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,306 | INFO     | left removable region: 20
[2026-03-09 19:27:46] 2026-03-09 18:27:03,306 | INFO     | sum of square deviations: 964984590.4931524
[2026-03-09 19:27:46] 2026-03-09 18:27:03,307 | INFO     | sum of deviations: -7752191795.589041
[2026-03-09 19:27:46] 2026-03-09 18:27:03,307 | INFO     | mean x: 1773075981.5068493
[2026-03-09 19:27:46] 2026-03-09 18:27:03,307 | INFO     | mean y: 2345750.0890410957
[2026-03-09 19:27:46] 2026-03-09 18:27:03,307 | INFO     | intersect: 14246329759.998388
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | chi2: 0.029774903708521015
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | current memory leak: -8.03 B/s (using 146 data points, chi2=0.03)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | could have reported an average CPU frequency of 2647 MHz (9 samples)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | ..............................
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | . Timing measurements:
[2026-03-09 19:27:46] 2026-03-09 18:27:03,308 | INFO     | . get job = 0 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . initial setup = 1 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . payload setup = 24 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . stage-in = 0 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . payload execution = 10503 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . stage-out = 1 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | . log creation = 0 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,309 | INFO     | ..............................
[2026-03-09 19:27:46] 2026-03-09 18:27:03,721 | INFO     | 
[2026-03-09 19:27:46] 2026-03-09 18:27:03,721 | INFO     | job summary report
[2026-03-09 19:27:46] 2026-03-09 18:27:03,721 | INFO     | --------------------------------------------------
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | PanDA job id: 7038495535
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | task id: 48955015
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | errors: (none)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | pilot state: finished 
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | transexitcode: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | exeerrorcode: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | exeerrordiag: 
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | exitcode: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | exitmsg: OK
[2026-03-09 19:27:46] 2026-03-09 18:27:03,722 | INFO     | cpuconsumptiontime: 36526 s
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | nevents: 400
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | neventsw: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | pid: 2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | pgrp: 2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | corecount: 4
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | event service: False
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | sizes: {0: 2279864, 1: 2280268, 10532: 2309299, 10534: 2318317, 10537: 2318373, 10540: 2318631}
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | --------------------------------------------------
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | 
[2026-03-09 19:27:46] 2026-03-09 18:27:03,723 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot8/slots/1
[2026-03-09 19:27:46] 2026-03-09 18:27:03,806 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,807 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,808 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,809 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,809 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 19:27:46] 2026-03-09 18:27:03,809 | INFO     | job 7038495535 has completed (purged errors)
[2026-03-09 19:27:46] 2026-03-09 18:27:03,809 | INFO     | overall cleanup function is called
[2026-03-09 19:27:46] 2026-03-09 18:27:04,785 | INFO     | PID=2365196 has CPU usage=17.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 19:27:46] 2026-03-09 18:27:04,786 | INFO     | .. there are 30 such processes running
[2026-03-09 19:27:46] 2026-03-09 18:27:04,826 | INFO     | --- collectZombieJob: --- 10, [2368303]
[2026-03-09 19:27:46] 2026-03-09 18:27:04,826 | INFO     | zombie collector waiting for pid 2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:04,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 19:27:46] 2026-03-09 18:27:04,826 | INFO     | collected zombie processes
[2026-03-09 19:27:46] 2026-03-09 18:27:04,826 | INFO     | will attempt to kill all subprocesses of pid=2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:05,733 | INFO     | process IDs to be killed: [2368303] (in reverse order)
[2026-03-09 19:27:46] 2026-03-09 18:27:06,194 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 19:27:46] 2026-03-09 18:27:06,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 19:27:46] 2026-03-09 18:27:06,230 | INFO     | did not find any defunct processes belonging to 2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:06,260 | INFO     | did not find any defunct processes belonging to 2368303
[2026-03-09 19:27:46] 2026-03-09 18:27:06,261 | INFO     | ready for new job
[2026-03-09 19:27:46] 2026-03-09 18:27:06,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 19:27:46] 2026-03-09 18:27:06,263 | INFO     | **************************************
[2026-03-09 19:27:46] 2026-03-09 18:27:06,263 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 19:27:46] 2026-03-09 18:27:06,263 | INFO     | **************************************
[2026-03-09 19:27:46] 2026-03-09 18:27:06,263 | INFO     | 
[2026-03-09 19:27:46] 2026-03-09 18:27:06,275 | INFO     | architecture information:
[2026-03-09 19:27:46] 2026-03-09 18:27:06,276 | INFO     | executing command: cat /etc/os-release
[2026-03-09 19:27:46] 2026-03-09 18:27:06,311 | INFO     | cat /etc/os-release:
[2026-03-09 19:27:46] NAME="CentOS Linux"
[2026-03-09 19:27:46] VERSION="7 (Core)"
[2026-03-09 19:27:46] ID="centos"
[2026-03-09 19:27:46] ID_LIKE="rhel fedora"
[2026-03-09 19:27:46] VERSION_ID="7"
[2026-03-09 19:27:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 19:27:46] ANSI_COLOR="0;31"
[2026-03-09 19:27:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 19:27:46] HOME_URL="https://www.centos.org/"
[2026-03-09 19:27:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 19:27:46] 
[2026-03-09 19:27:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 19:27:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 19:27:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 19:27:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 19:27:46] 
[2026-03-09 19:27:46] 2026-03-09 18:27:06,311 | INFO     | **************************************
[2026-03-09 19:27:46] 2026-03-09 18:27:06,814 | INFO     | executing command: df -mP /var/lib/boinc/var/slot8/slots/1
[2026-03-09 19:27:46] 2026-03-09 18:27:06,856 | INFO     | sufficient remaining disk space (58159267840 B)
[2026-03-09 19:27:46] 2026-03-09 18:27:06,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 19:27:46] 2026-03-09 18:27:06,857 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 19:27:46] 2026-03-09 18:27:06,857 | INFO     | update_server=False
[2026-03-09 19:27:46] 2026-03-09 18:27:06,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 19:27:46] 2026-03-09 18:27:06,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 19:27:46] 2026-03-09 18:27:07,153 | INFO     | all data control threads have been joined
[2026-03-09 19:27:46] 2026-03-09 18:27:07,189 | INFO     | all job control threads have been joined
[2026-03-09 19:27:46] 2026-03-09 18:27:07,453 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:27:46] 2026-03-09 18:27:07,453 | INFO     | aborting loop
[2026-03-09 19:27:46] 2026-03-09 18:27:07,491 | INFO     | all payload control threads have been joined
[2026-03-09 19:27:46] 2026-03-09 18:27:07,862 | INFO     | [job] retrieve thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 19:27:46] 2026-03-09 18:27:08,158 | INFO     | [data] control thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,194 | INFO     | [job] control thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,208 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,257 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 19:27:46] 2026-03-09 18:27:08,458 | INFO     | [job] job monitor thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,496 | INFO     | [payload] control thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:08,627 | INFO     | [payload] validate_post thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,012 | INFO     | [data] copytool_in thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,133 | INFO     | [job] validate thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,157 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,158 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,453 | INFO     | [job] queue monitor thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:09,457 | INFO     | [payload] failed_post thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:10,032 | INFO     | [data] copytool_out thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:10,864 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 19:27:46] 2026-03-09 18:27:37,946 | INFO     | PID=2365196 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 19:27:46] 2026-03-09 18:27:37,947 | INFO     | .. there are 30 such processes running
[2026-03-09 19:27:46] 2026-03-09 18:27:37,947 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 19:27:46] 2026-03-09 18:27:37,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 19:27:46] 2026-03-09 18:27:37,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 19:27:46] 2026-03-09 18:27:39,176 | INFO     | [monitor] cgroup control has ended
[2026-03-09 19:27:46] 2026-03-09 18:27:40,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22422516578112)>', '<ExcThread(monitor, started 22422210209536)>']
[2026-03-09 19:27:46] 2026-03-09 18:27:40,962 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 19:27:46] 2026-03-09 18:27:40,962 | INFO     | [monitor] control thread has ended
[2026-03-09 19:27:46] 2026-03-09 18:27:45,973 | INFO     | all workflow threads have been joined
[2026-03-09 19:27:46] 2026-03-09 18:27:45,973 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 19:27:46] 2026-03-09 18:27:45,973 | INFO     | traces error code: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:45,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 19:27:46] 2026-03-09 18:27:46,228 [wrapper] ==== pilot stdout END ====
[2026-03-09 19:27:46] 2026-03-09 18:27:46,255 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 19:27:46] 2026-03-09 18:27:46,260 [wrapper] pilotpid: 2365196
[2026-03-09 19:27:46] 2026-03-09 18:27:46,279 [wrapper] Pilot exit status: 0
[2026-03-09 19:27:46] 2026-03-09 18:27:46,400 [wrapper] pandaids: 7038495535 7038495535
[2026-03-09 19:27:46] 2026-03-09 18:27:46,651 [wrapper] cleanup supervisor_pilot 2833641 2365197
[2026-03-09 19:27:46] 2026-03-09 18:27:46,661 [wrapper] Test setup, not cleaning
[2026-03-09 19:27:46] 2026-03-09 18:27:46,668 [wrapper] apfmon messages muted
[2026-03-09 19:27:46] 2026-03-09 18:27:46,679 [wrapper] ==== wrapper stdout END ====
[2026-03-09 19:27:46] 2026-03-09 18:27:46,683 [wrapper] ==== wrapper stderr END ====
[2026-03-09 19:27:46]  *** Error codes and diagnostics ***
[2026-03-09 19:27:46]     "exeErrorCode": 0,
[2026-03-09 19:27:46]     "exeErrorDiag": "",
[2026-03-09 19:27:46]     "pilotErrorCode": 0,
[2026-03-09 19:27:46]     "pilotErrorDiag": "",
[2026-03-09 19:27:46]  *** Listing of results directory ***
[2026-03-09 19:27:46] total 1049132
[2026-03-09 19:27:46] drwx------. 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc    584627 Mar  4 14:58 pilot3.tar.gz
[2026-03-09 19:27:46] -rwx------. 1 boinc boinc     36322 Mar  4 14:59 runpilot2-wrapper.sh
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc      5111 Mar  4 15:01 queuedata.json
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc       100 Mar  9 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 19:27:46] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 12:04 run_atlas
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc       105 Mar  9 12:04 job.xml
[2026-03-09 19:27:46] -rw-r--r--. 3 boinc boinc 438883745 Mar  9 13:21 EVNT.46701403._002047.pool.root.1
[2026-03-09 19:27:46] -rw-r--r--. 3 boinc boinc 438883745 Mar  9 13:21 ATLAS.root_0
[2026-03-09 19:27:46] drwxrwx--x. 2 boinc boinc      4096 Mar  9 13:21 shared
[2026-03-09 19:27:46] -rw-r--r--. 2 boinc boinc    597953 Mar  9 13:21 input.tar.gz
[2026-03-09 19:27:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:21 start_atlas.sh
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc         0 Mar  9 13:21 boinc_lockfile
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc      2568 Mar  9 16:30 pandaJob.out
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc   1002554 Mar  9 16:31 agis_schedconf.cvmfs.json
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc   1511578 Mar  9 16:31 agis_ddmendpoints.agis.ALL.json
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc       442 Mar  9 16:31 workernode_map.json
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc      6620 Mar  9 18:04 init_data.xml
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc 189006721 Mar  9 19:26 HITS.48955015._000250.pool.root.1
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc       532 Mar  9 19:26 boinc_task_state.xml
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc      1027 Mar  9 19:26 memory_monitor_summary.json
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc    386307 Mar  9 19:26 log.48955015._000250.job.log.tgz.1
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc        97 Mar  9 19:26 pilot_heartbeat.json
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc      6354 Mar  9 19:27 heartbeat.json
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc      8192 Mar  9 19:27 boinc_mmap_file
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc        28 Mar  9 19:27 wrapper_checkpoint.txt
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc      4828 Mar  9 19:27 pilotlog.txt
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc   1412544 Mar  9 19:27 log.48955015._000250.job.log.1
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc       357 Mar  9 19:27 output.list
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc       620 Mar  9 19:27 runtime_log
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc   1812480 Mar  9 19:27 result.tar.gz
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc      9265 Mar  9 19:27 runtime_log.err
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc       790 Mar  9 19:27 038KDmyv1H9n9Rq4apOajLDm4fhM0noT9bVooX4SDmVdILDmzVSJYm.diag
[2026-03-09 19:27:46] -rw-r--r--. 1 boinc boinc     23194 Mar  9 19:27 stderr.txt
[2026-03-09 19:27:46] HITS file was successfully produced:
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc 189006721 Mar  9 19:26 shared/HITS.pool.root.1
[2026-03-09 19:27:46]  *** Contents of shared directory: ***
[2026-03-09 19:27:46] total 615560
[2026-03-09 19:27:46] -rw-r--r--. 3 boinc boinc 438883745 Mar  9 13:21 ATLAS.root_0
[2026-03-09 19:27:46] -rw-r--r--. 2 boinc boinc    597953 Mar  9 13:21 input.tar.gz
[2026-03-09 19:27:46] -rw-r--r--. 2 boinc boinc     15845 Mar  9 13:21 start_atlas.sh
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc 189006721 Mar  9 19:26 HITS.pool.root.1
[2026-03-09 19:27:46] -rw-------. 1 boinc boinc   1812480 Mar  9 19:27 result.tar.gz
19:27:48 (2360559): run_atlas exited; CPU time 37117.625487
19:27:48 (2360559): called boinc_finish(0)

</stderr_txt>
]]>

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