Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:41:31 (524746): wrapper (7.7.26015): starting
22:41:31 (524746): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 22:41:31] Arguments: --nthreads 4
[2026-03-05 22:41:31] Threads: 4
[2026-03-05 22:41:31] Checking for CVMFS
[2026-03-05 22:41:31] No cvmfs_config command found, will try listing directly
[2026-03-05 22:41:31] CVMFS is ok
[2026-03-05 22:41:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 22:41:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 22:41:31] Further information can be found at the LHC@home message board.
[2026-03-05 22:41:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 22:41:31] Checking for apptainer binary...
[2026-03-05 22:41:31] which: no apptainer in ((null))
[2026-03-05 22:41:31] apptainer is not installed, using version from CVMFS
[2026-03-05 22:41:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 22:41:31] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-05 22:41:31] apptainer works
[2026-03-05 22:41:31] Set ATHENA_PROC_NUMBER=4
[2026-03-05 22:41:31] Set ATHENA_CORE_NUMBER=4
[2026-03-05 22:41:31] Starting ATLAS job with PandaID=7039878910
[2026-03-05 22:41:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 23:49:57]  *** The last 200 lines of the pilot log: ***
[2026-03-05 23:49:57]  storage_token=
[2026-03-05 23:49:57]  surl=/var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/log.48700930._002337.job.log.tgz.1
[2026-03-05 23:49:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/c7/log.48700930._002337.job.log.tgz.1
[2026-03-05 23:49:57]  workdir=None
[2026-03-05 23:49:57] ]
[2026-03-05 23:49:57] 2026-03-05 22:49:09,005 | INFO     | transferring file log.48700930._002337.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/log.48700930._002337.job.log.tgz.1 to /var/lib/b
[2026-03-05 23:49:57] 2026-03-05 22:49:09,006 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/log.48700930._002337.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/3/lo
[2026-03-05 23:49:57] 2026-03-05 22:49:09,021 | INFO     | adding to output.list: log.48700930._002337.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/c7/log.48700930._002337.job.log.tg
[2026-03-05 23:49:57] 2026-03-05 22:49:09,022 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 23:49:57] 2026-03-05 22:49:09,022 | INFO     | summary of transferred files:
[2026-03-05 23:49:57] 2026-03-05 22:49:09,022 | INFO     |  -- lfn=log.48700930._002337.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 23:49:57] 2026-03-05 22:49:09,022 | INFO     | stage-out finished correctly
[2026-03-05 23:49:57] 2026-03-05 22:49:09,350 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 23:49:57] 2026-03-05 22:49:10,933 | INFO     | time since job start (4046s) is within the limit (349056.0s)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,633 | INFO     | job 7039878910 has state=finished
[2026-03-05 23:49:57] 2026-03-05 22:49:11,633 | INFO     | preparing for final server update for job 7039878910 in state='finished'
[2026-03-05 23:49:57] 2026-03-05 22:49:11,634 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/jobReport.json
[2026-03-05 23:49:57] 2026-03-05 22:49:11,635 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/3/workernode_map.json
[2026-03-05 23:49:57] 2026-03-05 22:49:11,635 | INFO     | this job has now completed (state=finished)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,635 | INFO     | log transfer has been attempted: DONE
[2026-03-05 23:49:57] 2026-03-05 22:49:11,635 | INFO     | job 7039878910 has finished - writing final server update
[2026-03-05 23:49:57] 2026-03-05 22:49:11,636 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_306099/.job.ad'
[2026-03-05 23:49:57] 2026-03-05 22:49:11,636 | INFO     | total number of processed events: 400 (read)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,652 | INFO     | using path: /var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,652 | INFO     | extracted standard info from prmon json
[2026-03-05 23:49:57] 2026-03-05 22:49:11,652 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 23:49:57] 2026-03-05 22:49:11,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 23:49:57] 2026-03-05 22:49:11,653 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 23:49:57] 2026-03-05 22:49:11,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 23:49:57] 2026-03-05 22:49:11,654 | INFO     | fitting pss+swap vs Time
[2026-03-05 23:49:57] 2026-03-05 22:49:11,654 | INFO     | sum of square deviations: 63666310.0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,654 | INFO     | sum of deviations: 89280637.00000001
[2026-03-05 23:49:57] 2026-03-05 22:49:11,654 | INFO     | mean x: 1772749000.0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,654 | INFO     | mean y: 2320765.7288135593
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | intersect: -2483643317.333532
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | chi2: 0.00033263047907808476
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | current memory leak: 1.40 B/s (using 59 data points, chi2=0.00)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | could have reported an average CPU frequency of 3575 MHz (6 samples)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | ..............................
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . Timing measurements:
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . get job = 0 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . initial setup = 5 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . payload setup = 5 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . stage-in = 0 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . payload execution = 4023 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . stage-out = 0 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | . log creation = 0 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,655 | INFO     | ..............................
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | 
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | job summary report
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | --------------------------------------------------
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | PanDA job id: 7039878910
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | task id: 48700930
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | errors: (none)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | pilot state: finished 
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | transexitcode: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,838 | INFO     | exeerrorcode: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | exeerrordiag: 
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | exitcode: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | exitmsg: OK
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | cpuconsumptiontime: 15277 s
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | nevents: 400
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | neventsw: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | pid: 546108
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | pgrp: 546108
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | corecount: 4
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | event service: False
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | sizes: {0: 2295760, 11: 2295760, 4033: 2321625, 4034: 2330701, 4036: 2330839}
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | --------------------------------------------------
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | 
[2026-03-05 23:49:57] 2026-03-05 22:49:11,839 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/3
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | job 7039878910 has completed (purged errors)
[2026-03-05 23:49:57] 2026-03-05 22:49:11,858 | INFO     | overall cleanup function is called
[2026-03-05 23:49:57] 2026-03-05 22:49:11,929 | WARNING  | process 546108 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 23:49:57] 2026-03-05 22:49:12,867 | INFO     | --- collectZombieJob: --- 10, [546108]
[2026-03-05 23:49:57] 2026-03-05 22:49:12,867 | INFO     | zombie collector waiting for pid 546108
[2026-03-05 23:49:57] 2026-03-05 22:49:12,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 23:49:57] 2026-03-05 22:49:12,868 | INFO     | collected zombie processes
[2026-03-05 23:49:57] 2026-03-05 22:49:12,868 | INFO     | will attempt to kill all subprocesses of pid=546108
[2026-03-05 23:49:57] 2026-03-05 22:49:13,069 | INFO     | using path: /var/lib/boinc/var/slot60/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 23:49:57] 2026-03-05 22:49:13,070 | INFO     | using path: /var/lib/boinc/var/slot60/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 23:49:57] 2026-03-05 22:49:13,070 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-05 23:49:57] 2026-03-05 22:49:13,070 | WARNING  | maxPSS not found in memory monitor output
[2026-03-05 23:49:57] 2026-03-05 22:49:13,071 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/payload.stdout) since it has not been created yet
[2026-03-05 23:49:57] 2026-03-05 22:49:13,071 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/3
[2026-03-05 23:49:57] 2026-03-05 22:49:13,088 | INFO     | sufficient remaining disk space (20796407808 B)
[2026-03-05 23:49:57] 2026-03-05 22:49:13,088 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-05 23:49:57] 2026-03-05 22:49:13,088 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot60/slots/3/PanDA_Pilot-7039878910/HITS.48700930._002337.pool.root.1 since it does not exist
[2026-03-05 23:49:57] 2026-03-05 22:49:14,637 | INFO     | PID=531917 has CPU usage=17.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 23:49:57] 2026-03-05 22:49:14,637 | INFO     | .. there are 45 such processes running
[2026-03-05 23:49:57] 2026-03-05 22:49:15,115 | INFO     | process IDs to be killed: [546108] (in reverse order)
[2026-03-05 23:49:57] 2026-03-05 22:49:15,150 | INFO     | number of running child processes to parent process 546108: 1
[2026-03-05 23:49:57] 2026-03-05 22:49:15,150 | INFO     | maximum number of monitored processes: 6
[2026-03-05 23:49:57] 2026-03-05 22:49:15,151 | INFO     | aborting job monitoring since job object (job id=7039878910) has expired
[2026-03-05 23:49:57] 2026-03-05 22:49:15,342 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 23:49:57] 2026-03-05 22:49:15,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 23:49:57] 2026-03-05 22:49:15,371 | INFO     | did not find any defunct processes belonging to 546108
[2026-03-05 23:49:57] 2026-03-05 22:49:15,400 | INFO     | did not find any defunct processes belonging to 546108
[2026-03-05 23:49:57] 2026-03-05 22:49:15,400 | INFO     | ready for new job
[2026-03-05 23:49:57] 2026-03-05 22:49:15,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 23:49:57] 2026-03-05 22:49:15,401 | INFO     | **************************************
[2026-03-05 23:49:57] 2026-03-05 22:49:15,401 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 23:49:57] 2026-03-05 22:49:15,401 | INFO     | **************************************
[2026-03-05 23:49:57] 2026-03-05 22:49:15,401 | INFO     | 
[2026-03-05 23:49:57] 2026-03-05 22:49:15,407 | INFO     | architecture information:
[2026-03-05 23:49:57] 2026-03-05 22:49:15,407 | INFO     | executing command: cat /etc/os-release
[2026-03-05 23:49:57] 2026-03-05 22:49:15,421 | INFO     | cat /etc/os-release:
[2026-03-05 23:49:57] NAME="CentOS Linux"
[2026-03-05 23:49:57] VERSION="7 (Core)"
[2026-03-05 23:49:57] ID="centos"
[2026-03-05 23:49:57] ID_LIKE="rhel fedora"
[2026-03-05 23:49:57] VERSION_ID="7"
[2026-03-05 23:49:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 23:49:57] ANSI_COLOR="0;31"
[2026-03-05 23:49:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 23:49:57] HOME_URL="https://www.centos.org/"
[2026-03-05 23:49:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 23:49:57] 
[2026-03-05 23:49:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 23:49:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 23:49:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 23:49:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 23:49:57] 
[2026-03-05 23:49:57] 2026-03-05 22:49:15,421 | INFO     | **************************************
[2026-03-05 23:49:57] 2026-03-05 22:49:15,924 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/3
[2026-03-05 23:49:57] 2026-03-05 22:49:15,942 | INFO     | sufficient remaining disk space (20796407808 B)
[2026-03-05 23:49:57] 2026-03-05 22:49:15,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 23:49:57] 2026-03-05 22:49:15,942 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 23:49:57] 2026-03-05 22:49:15,942 | INFO     | update_server=False
[2026-03-05 23:49:57] 2026-03-05 22:49:15,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 23:49:57] 2026-03-05 22:49:15,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 23:49:57] 2026-03-05 22:49:15,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 23:49:57] 2026-03-05 22:49:15,943 | INFO     | will abort loop
[2026-03-05 23:49:57] 2026-03-05 22:49:15,978 | INFO     | all payload control threads have been joined
[2026-03-05 23:49:57] 2026-03-05 22:49:16,492 | INFO     | all data control threads have been joined
[2026-03-05 23:49:57] 2026-03-05 22:49:16,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 23:49:57] 2026-03-05 22:49:16,947 | INFO     | [job] retrieve thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:16,948 | INFO     | [job] job monitor thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:16,983 | INFO     | [payload] control thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,055 | INFO     | all job control threads have been joined
[2026-03-05 23:49:57] 2026-03-05 22:49:17,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 23:49:57] 2026-03-05 22:49:17,253 | INFO     | [payload] validate_post thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,393 | INFO     | [job] validate thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,497 | INFO     | [data] control thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,530 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,623 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,725 | INFO     | [job] queue monitor thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:17,940 | INFO     | [data] copytool_in thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:18,061 | INFO     | [job] control thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:18,203 | INFO     | [payload] failed_post thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:18,246 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:19,094 | INFO     | [data] copytool_out thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:19,949 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:26,806 | INFO     | job.realtimelogging is not enabled
[2026-03-05 23:49:57] 2026-03-05 22:49:27,815 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 23:49:57] 2026-03-05 22:49:47,225 | INFO     | PID=531917 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-05 23:49:57] 2026-03-05 22:49:47,226 | INFO     | .. there are 44 such processes running
[2026-03-05 23:49:57] 2026-03-05 22:49:47,226 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 23:49:57] 2026-03-05 22:49:47,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 23:49:57] 2026-03-05 22:49:47,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 23:49:57] 2026-03-05 22:49:50,245 | INFO     | [monitor] cgroup control has ended
[2026-03-05 23:49:57] 2026-03-05 22:49:51,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22841333593920)>', '<ExcThread(monitor, started 22841019819776)>']
[2026-03-05 23:49:57] 2026-03-05 22:49:52,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 23:49:57] 2026-03-05 22:49:52,250 | INFO     | [monitor] control thread has ended
[2026-03-05 23:49:57] 2026-03-05 22:49:56,764 | INFO     | all workflow threads have been joined
[2026-03-05 23:49:57] 2026-03-05 22:49:56,764 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 23:49:57] 2026-03-05 22:49:56,765 | INFO     | traces error code: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:56,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 23:49:57] 2026-03-05 22:49:56,953 [wrapper] ==== pilot stdout END ====
[2026-03-05 23:49:57] 2026-03-05 22:49:56,955 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 23:49:57] 2026-03-05 22:49:56,957 [wrapper] pilotpid: 531917
[2026-03-05 23:49:57] 2026-03-05 22:49:56,958 [wrapper] Pilot exit status: 0
[2026-03-05 23:49:57] 2026-03-05 22:49:56,965 [wrapper] pandaids: 7039878910
[2026-03-05 23:49:57] 2026-03-05 22:49:57,098 [wrapper] cleanup supervisor_pilot  928183 531918
[2026-03-05 23:49:57] 2026-03-05 22:49:57,100 [wrapper] Test setup, not cleaning
[2026-03-05 23:49:57] 2026-03-05 22:49:57,103 [wrapper] apfmon messages muted
[2026-03-05 23:49:57] 2026-03-05 22:49:57,105 [wrapper] ==== wrapper stdout END ====
[2026-03-05 23:49:57] 2026-03-05 22:49:57,107 [wrapper] ==== wrapper stderr END ====
[2026-03-05 23:49:57]  *** Error codes and diagnostics ***
[2026-03-05 23:49:57]     "exeErrorCode": 0,
[2026-03-05 23:49:57]     "exeErrorDiag": "",
[2026-03-05 23:49:57]     "pilotErrorCode": 0,
[2026-03-05 23:49:57]     "pilotErrorDiag": "",
[2026-03-05 23:49:57]  *** Listing of results directory ***
[2026-03-05 23:49:57] total 339332
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc      5111 Mar  4 13:56 queuedata.json
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc    584627 Mar  4 13:56 pilot3.tar.gz
[2026-03-05 23:49:57] -rwx------. 1 boinc boinc     36322 Mar  4 13:56 runpilot2-wrapper.sh
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc       100 Mar  5 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 23:49:57] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 22:41 run_atlas
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc       105 Mar  5 22:41 job.xml
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc      6702 Mar  5 22:41 init_data.xml
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc 192034804 Mar  5 22:41 EVNT.48700928._000091.pool.root.1
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc     15845 Mar  5 22:41 start_atlas.sh
[2026-03-05 23:49:57] drwxrwx--x. 2 boinc boinc      4096 Mar  5 22:41 shared
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc    597944 Mar  5 22:41 input.tar.gz
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc         0 Mar  5 22:41 boinc_lockfile
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc      2518 Mar  5 22:41 pandaJob.out
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc    998552 Mar  5 22:41 agis_schedconf.cvmfs.json
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc   1521291 Mar  5 22:41 agis_ddmendpoints.agis.ALL.json
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc       444 Mar  5 22:41 workernode_map.json
[2026-03-05 23:49:57] drwx------. 5 boinc boinc      4096 Mar  5 22:41 pilot3
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc 149801584 Mar  5 23:48 HITS.48700930._002337.pool.root.1
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc       529 Mar  5 23:48 boinc_task_state.xml
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc        95 Mar  5 23:48 pilot_heartbeat.json
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc      1029 Mar  5 23:49 memory_monitor_summary.json
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc    247622 Mar  5 23:49 log.48700930._002337.job.log.tgz.1
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc      6344 Mar  5 23:49 heartbeat.json
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc      8192 Mar  5 23:49 boinc_mmap_file
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc        27 Mar  5 23:49 wrapper_checkpoint.txt
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc      4902 Mar  5 23:49 pilotlog.txt
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc    601838 Mar  5 23:49 log.48700930._002337.job.log.1
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc       357 Mar  5 23:49 output.list
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc       620 Mar  5 23:49 runtime_log
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc    870400 Mar  5 23:49 result.tar.gz
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc      9204 Mar  5 23:49 runtime_log.err
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc       662 Mar  5 23:49 phaNDmuw0H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzLKLDmi7yPJo.diag
[2026-03-05 23:49:57] -rw-r--r--. 1 boinc boinc     22318 Mar  5 23:49 stderr.txt
[2026-03-05 23:49:57] HITS file was successfully produced:
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc 149801584 Mar  5 23:48 shared/HITS.pool.root.1
[2026-03-05 23:49:57]  *** Contents of shared directory: ***
[2026-03-05 23:49:57] total 335288
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc 192034804 Mar  5 22:41 ATLAS.root_0
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc     15845 Mar  5 22:41 start_atlas.sh
[2026-03-05 23:49:57] -rw-r--r--. 2 boinc boinc    597944 Mar  5 22:41 input.tar.gz
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc 149801584 Mar  5 23:48 HITS.pool.root.1
[2026-03-05 23:49:57] -rw-------. 1 boinc boinc    870400 Mar  5 23:49 result.tar.gz
23:49:59 (524746): run_atlas exited; CPU time 15434.493489
23:49:59 (524746): called boinc_finish(0)

</stderr_txt>
]]>

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