Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:40:16 (9602): wrapper (7.7.26015): starting
07:40:16 (9602): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 07:40:16] Arguments: --nthreads 8
[2026-03-04 07:40:16] Threads: 8
[2026-03-04 07:40:16] Checking for CVMFS
[2026-03-04 07:40:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 07:40:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 07:40:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 07:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 07:40:16] 2.11.2.0 2804 181221 74064 156880 3 52 19297633 20275200 1 130560 0 42387911 99.815 12845316 30748 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-04 07:40:16] CVMFS is ok
[2026-03-04 07:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:40:16] Further information can be found at the LHC@home message board.
[2026-03-04 07:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:40:16] Checking for apptainer binary...
[2026-03-04 07:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 07:40:16] Running /usr/bin/apptainer --version
[2026-03-04 07:40:16] apptainer version 1.3.2-1.el7
[2026-03-04 07:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:40:18] c-204-3.aglt2.org
[2026-03-04 07:40:18] apptainer works
[2026-03-04 07:40:18] Set ATHENA_PROC_NUMBER=8
[2026-03-04 07:40:18] Set ATHENA_CORE_NUMBER=8
[2026-03-04 07:40:18] Starting ATLAS job with PandaID=7037895075
[2026-03-04 07:40:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 10:11:03]  *** The last 200 lines of the pilot log: ***
[2026-03-04 10:11:03] 2026-03-04 15:09:58,386 | INFO     | extracted standard info from prmon json
[2026-03-04 10:11:03] 2026-03-04 15:09:58,386 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 10:11:03] 2026-03-04 15:09:58,386 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 10:11:03] 2026-03-04 15:09:58,386 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 10:11:03] 2026-03-04 15:09:58,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 10:11:03] 2026-03-04 15:09:58,389 | INFO     | fitting pss+swap vs Time
[2026-03-04 10:11:03] 2026-03-04 15:09:58,389 | INFO     | sum of square deviations: 984941258.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,390 | INFO     | sum of deviations: 24489381775.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,390 | INFO     | mean x: 1772632521.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,390 | INFO     | mean y: 2767212.5782312923
[2026-03-04 10:11:03] 2026-03-04 15:09:58,391 | INFO     | intersect: -44071612047.0524
[2026-03-04 10:11:03] 2026-03-04 15:09:58,391 | INFO     | chi2: 2.2810290172744057
[2026-03-04 10:11:03] 2026-03-04 15:09:58,391 | INFO     | sum of square deviations: 887813855.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,392 | INFO     | sum of deviations: 33987793157.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,392 | INFO     | mean x: 1772632368.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,392 | INFO     | mean y: 2781661.5352112674
[2026-03-04 10:11:03] 2026-03-04 15:09:58,392 | INFO     | intersect: -67858135253.36307
[2026-03-04 10:11:03] 2026-03-04 15:09:58,393 | INFO     | chi2: 1.5460225569673638
[2026-03-04 10:11:03] 2026-03-04 15:09:58,393 | INFO     | current chi2=1.5460225569673638 (change=32.22258264760256 %)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,393 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | sum of deviations: 32558870902.000004
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | mean x: 1772632216.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | mean y: 2779253.299270073
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | intersect: -72385955816.88036
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | chi2: 1.5464079046633163
[2026-03-04 10:11:03] 2026-03-04 15:09:58,394 | INFO     | current chi2=1.5464079046633163 (change=-0.024925101785606633 %)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,395 | INFO     | right removable region: 136
[2026-03-04 10:11:03] 2026-03-04 15:09:58,395 | INFO     | sum of square deviations: 887813855.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | sum of deviations: -3058522310.000001
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | mean x: 1772632673.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | mean y: 2809917.23943662
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | intersect: 6109536620.982232
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | chi2: 0.7795714001500135
[2026-03-04 10:11:03] 2026-03-04 15:09:58,396 | INFO     | current chi2=0.7795714001500135 (change=65.82369648758257 %)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,397 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,397 | INFO     | sum of deviations: -5946960150.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | mean x: 1772632826.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | mean y: 2814707.6204379564
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | intersect: 13224804874.560896
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | chi2: 0.7591462648160877
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | current chi2=0.7591462648160877 (change=2.6200467757020505 %)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,398 | INFO     | left removable region: 20
[2026-03-04 10:11:03] 2026-03-04 15:09:58,399 | INFO     | sum of square deviations: 483971865.0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,399 | INFO     | sum of deviations: 2544663586.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,399 | INFO     | mean x: 1772632795.5
[2026-03-04 10:11:03] 2026-03-04 15:09:58,399 | INFO     | mean y: 2833509.8362068967
[2026-03-04 10:11:03] 2026-03-04 15:09:58,400 | INFO     | intersect: -9317448211.384407
[2026-03-04 10:11:03] 2026-03-04 15:09:58,400 | INFO     | chi2: 0.00013153899340126975
[2026-03-04 10:11:03] 2026-03-04 15:09:58,400 | INFO     | current memory leak: 5.26 B/s (using 116 data points, chi2=0.00)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,400 | INFO     | could have reported an average CPU frequency of 1745 MHz (8 samples)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | ..............................
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . Timing measurements:
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . get job = 0 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . initial setup = 8 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . payload setup = 8 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . stage-in = 0 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . payload execution = 8932 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . stage-out = 1 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,401 | INFO     | . log creation = 0 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,402 | INFO     | ..............................
[2026-03-04 10:11:03] 2026-03-04 15:09:58,485 | INFO     | 
[2026-03-04 10:11:03] 2026-03-04 15:09:58,485 | INFO     | job summary report
[2026-03-04 10:11:03] 2026-03-04 15:09:58,485 | INFO     | --------------------------------------------------
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | PanDA job id: 7037895075
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | task id: 48838432
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | errors: (none)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | pilot state: finished 
[2026-03-04 10:11:03] 2026-03-04 15:09:58,486 | INFO     | transexitcode: 0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | exeerrorcode: 0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | exeerrordiag: 
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | exitcode: 0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | exitmsg: OK
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | cpuconsumptiontime: 67152 s
[2026-03-04 10:11:03] 2026-03-04 15:09:58,487 | INFO     | nevents: 400
[2026-03-04 10:11:03] 2026-03-04 15:09:58,488 | INFO     | neventsw: 0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,488 | INFO     | pid: 17813
[2026-03-04 10:11:03] 2026-03-04 15:09:58,488 | INFO     | pgrp: 17813
[2026-03-04 10:11:03] 2026-03-04 15:09:58,488 | INFO     | corecount: 8
[2026-03-04 10:11:03] 2026-03-04 15:09:58,488 | INFO     | event service: False
[2026-03-04 10:11:03] 2026-03-04 15:09:58,489 | INFO     | sizes: {0: 2287041, 11: 2287041, 8941: 2315248, 8942: 2315247, 8943: 2324301, 8944: 2324357, 8945: 2324679}
[2026-03-04 10:11:03] 2026-03-04 15:09:58,489 | INFO     | --------------------------------------------------
[2026-03-04 10:11:03] 2026-03-04 15:09:58,489 | INFO     | 
[2026-03-04 10:11:03] 2026-03-04 15:09:58,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 10:11:03] 2026-03-04 15:09:58,518 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,518 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,519 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,519 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,521 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,522 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 10:11:03] 2026-03-04 15:09:58,522 | INFO     | job 7037895075 has completed (purged errors)
[2026-03-04 10:11:03] 2026-03-04 15:09:58,522 | INFO     | overall cleanup function is called
[2026-03-04 10:11:03] 2026-03-04 15:09:59,531 | INFO     | --- collectZombieJob: --- 10, [17813]
[2026-03-04 10:11:03] 2026-03-04 15:09:59,531 | INFO     | zombie collector waiting for pid 17813
[2026-03-04 10:11:03] 2026-03-04 15:09:59,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 10:11:03] 2026-03-04 15:09:59,531 | INFO     | collected zombie processes
[2026-03-04 10:11:03] 2026-03-04 15:09:59,531 | INFO     | will attempt to kill all subprocesses of pid=17813
[2026-03-04 10:11:03] 2026-03-04 15:09:59,625 | INFO     | process IDs to be killed: [17813] (in reverse order)
[2026-03-04 10:11:03] 2026-03-04 15:09:59,683 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 10:11:03] 2026-03-04 15:09:59,684 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 10:11:03] 2026-03-04 15:09:59,687 | INFO     | did not find any defunct processes belonging to 17813
[2026-03-04 10:11:03] 2026-03-04 15:09:59,690 | INFO     | did not find any defunct processes belonging to 17813
[2026-03-04 10:11:03] 2026-03-04 15:09:59,690 | INFO     | ready for new job
[2026-03-04 10:11:03] 2026-03-04 15:09:59,690 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 10:11:03] 2026-03-04 15:09:59,692 | INFO     | **************************************
[2026-03-04 10:11:03] 2026-03-04 15:09:59,693 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 10:11:03] 2026-03-04 15:09:59,693 | INFO     | **************************************
[2026-03-04 10:11:03] 2026-03-04 15:09:59,693 | INFO     | 
[2026-03-04 10:11:03] 2026-03-04 15:09:59,693 | INFO     | architecture information:
[2026-03-04 10:11:03] 2026-03-04 15:09:59,694 | INFO     | executing command: cat /etc/os-release
[2026-03-04 10:11:03] 2026-03-04 15:09:59,714 | INFO     | cat /etc/os-release:
[2026-03-04 10:11:03] NAME="CentOS Linux"
[2026-03-04 10:11:03] VERSION="7 (Core)"
[2026-03-04 10:11:03] ID="centos"
[2026-03-04 10:11:03] ID_LIKE="rhel fedora"
[2026-03-04 10:11:03] VERSION_ID="7"
[2026-03-04 10:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 10:11:03] ANSI_COLOR="0;31"
[2026-03-04 10:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 10:11:03] HOME_URL="https://www.centos.org/"
[2026-03-04 10:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 10:11:03] 
[2026-03-04 10:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 10:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 10:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 10:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 10:11:03] 
[2026-03-04 10:11:03] 2026-03-04 15:09:59,714 | INFO     | **************************************
[2026-03-04 10:11:03] 2026-03-04 15:10:00,218 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 10:11:03] 2026-03-04 15:10:00,238 | INFO     | sufficient remaining disk space (18400411648 B)
[2026-03-04 10:11:03] 2026-03-04 15:10:00,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 10:11:03] 2026-03-04 15:10:00,238 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 10:11:03] 2026-03-04 15:10:00,239 | INFO     | update_server=False
[2026-03-04 10:11:03] 2026-03-04 15:10:00,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 10:11:03] 2026-03-04 15:10:00,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 10:11:03] 2026-03-04 15:10:00,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 10:11:03] 2026-03-04 15:10:00,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:11:03] 2026-03-04 15:10:00,736 | INFO     | all job control threads have been joined
[2026-03-04 10:11:03] 2026-03-04 15:10:00,870 | WARNING  | process 17813 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 10:11:03] 2026-03-04 15:10:00,945 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 10:11:03] 2026-03-04 15:10:01,032 | INFO     | number of running child processes to parent process 17813: 1
[2026-03-04 10:11:03] 2026-03-04 15:10:01,033 | INFO     | maximum number of monitored processes: 6
[2026-03-04 10:11:03] 2026-03-04 15:10:01,033 | INFO     | aborting job monitoring since job object (job id=7037895075) has expired
[2026-03-04 10:11:03] 2026-03-04 15:10:01,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:11:03] 2026-03-04 15:10:01,033 | INFO     | will abort loop
[2026-03-04 10:11:03] 2026-03-04 15:10:01,245 | INFO     | [job] retrieve thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:01,246 | INFO     | [job] queue monitor thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:01,280 | INFO     | [payload] validate_post thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:01,320 | INFO     | all data control threads have been joined
[2026-03-04 10:11:03] 2026-03-04 15:10:01,630 | INFO     | all payload control threads have been joined
[2026-03-04 10:11:03] 2026-03-04 15:10:01,741 | INFO     | [job] control thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:01,879 | INFO     | [job] validate thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,026 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,039 | INFO     | [job] job monitor thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,104 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,246 | INFO     | [data] copytool_out thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,263 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,323 | INFO     | [data] control thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,324 | INFO     | [payload] failed_post thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,385 | INFO     | [data] copytool_in thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,407 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:02,636 | INFO     | [payload] control thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:04,246 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 10:11:03] 2026-03-04 15:10:30,458 | INFO     | PID=13282 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 10:11:03] 2026-03-04 15:10:30,459 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 10:11:03] 2026-03-04 15:10:30,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 10:11:03] 2026-03-04 15:10:30,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 10:11:03] 2026-03-04 15:10:34,181 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-03-04 10:11:03] 2026-03-04 15:10:56,570 | INFO     | [monitor] cgroup control has ended
[2026-03-04 10:11:03] 2026-03-04 15:10:57,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732738991936)>', '<ExcThread(monitor, started 139731769739008)>']
[2026-03-04 10:11:03] 2026-03-04 15:10:58,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 10:11:03] 2026-03-04 15:10:58,603 | INFO     | [monitor] control thread has ended
[2026-03-04 10:11:03] 2026-03-04 15:11:02,661 | INFO     | all workflow threads have been joined
[2026-03-04 10:11:03] 2026-03-04 15:11:02,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 10:11:03] 2026-03-04 15:11:02,662 | INFO     | traces error code: 0
[2026-03-04 10:11:03] 2026-03-04 15:11:02,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 10:11:03] 2026-03-04 15:11:02,782 [wrapper] ==== pilot stdout END ====
[2026-03-04 10:11:03] 2026-03-04 15:11:02,787 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 10:11:03] 2026-03-04 15:11:02,792 [wrapper] pilotpid: 13282
[2026-03-04 10:11:03] 2026-03-04 15:11:02,796 [wrapper] Pilot exit status: 0
[2026-03-04 10:11:03] 2026-03-04 15:11:02,817 [wrapper] pandaids: 7037895075
[2026-03-04 10:11:03] 2026-03-04 15:11:02,868 [wrapper] cleanup supervisor_pilot 15568 13283
[2026-03-04 10:11:03] 2026-03-04 15:11:02,874 [wrapper] Test setup, not cleaning
[2026-03-04 10:11:03] 2026-03-04 15:11:02,879 [wrapper] apfmon messages muted
[2026-03-04 10:11:03] 2026-03-04 15:11:02,884 [wrapper] ==== wrapper stdout END ====
[2026-03-04 10:11:03] 2026-03-04 15:11:02,888 [wrapper] ==== wrapper stderr END ====
[2026-03-04 10:11:03]  *** Error codes and diagnostics ***
[2026-03-04 10:11:03]     "exeErrorCode": 0,
[2026-03-04 10:11:03]     "exeErrorDiag": "",
[2026-03-04 10:11:03]     "pilotErrorCode": 0,
[2026-03-04 10:11:03]     "pilotErrorDiag": "",
[2026-03-04 10:11:03]  *** Listing of results directory ***
[2026-03-04 10:11:03] total 502492
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas    584627 Mar  4 03:44 pilot3.tar.gz
[2026-03-04 10:11:03] -rwx------ 1 boincer umatlas     36322 Mar  4 03:45 runpilot2-wrapper.sh
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas      5111 Mar  4 03:45 queuedata.json
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas       100 Mar  4 07:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 10:11:03] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 07:40 run_atlas
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas       105 Mar  4 07:40 job.xml
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas 284774776 Mar  4 07:40 EVNT.48220101._000132.pool.root.1
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 07:40 start_atlas.sh
[2026-03-04 10:11:03] drwxrwx--x 2 boincer umatlas      4096 Mar  4 07:40 shared
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas    597973 Mar  4 07:40 input.tar.gz
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas         0 Mar  4 07:40 boinc_lockfile
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas      2580 Mar  4 07:40 pandaJob.out
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas        57 Mar  4 07:40 setup.sh.local
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas    997352 Mar  4 07:40 agis_schedconf.cvmfs.json
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas   1516092 Mar  4 07:40 agis_ddmendpoints.agis.ALL.json
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas       431 Mar  4 07:40 workernode_map.json
[2026-03-04 10:11:03] drwx------ 5 boincer umatlas      4096 Mar  4 07:40 pilot3
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas 222542868 Mar  4 10:09 HITS.48838432._006688.pool.root.1
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas       529 Mar  4 10:09 boinc_task_state.xml
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas        95 Mar  4 10:09 pilot_heartbeat.json
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas      1047 Mar  4 10:09 memory_monitor_summary.json
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas    392225 Mar  4 10:09 log.48838432._006688.job.log.tgz.1
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas      6389 Mar  4 10:09 heartbeat.json
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas      5908 Mar  4 10:10 init_data.xml
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas        27 Mar  4 10:11 wrapper_checkpoint.txt
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas      8192 Mar  4 10:11 boinc_mmap_file
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas      5259 Mar  4 10:11 pilotlog.txt
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas   1254501 Mar  4 10:11 log.48838432._006688.job.log.1
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas       357 Mar  4 10:11 output.list
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas       620 Mar  4 10:11 runtime_log
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas   1669120 Mar  4 10:11 result.tar.gz
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas      9336 Mar  4 10:11 runtime_log.err
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas       659 Mar  4 10:11 aLGKDmr2wH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm0qHLDmDYC5Nm.diag
[2026-03-04 10:11:03] -rw-r--r-- 1 boincer umatlas     21034 Mar  4 10:11 stderr.txt
[2026-03-04 10:11:03] HITS file was successfully produced:
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas 222542868 Mar  4 10:09 shared/HITS.pool.root.1
[2026-03-04 10:11:03]  *** Contents of shared directory: ***
[2026-03-04 10:11:03] total 497668
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas 284774776 Mar  4 07:40 ATLAS.root_0
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 07:40 start_atlas.sh
[2026-03-04 10:11:03] -rw-r--r-- 2 boincer umatlas    597973 Mar  4 07:40 input.tar.gz
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas 222542868 Mar  4 10:09 HITS.pool.root.1
[2026-03-04 10:11:03] -rw------- 1 boincer umatlas   1669120 Mar  4 10:11 result.tar.gz
10:11:04 (9602): run_atlas exited; CPU time 67104.359602
10:11:04 (9602): called boinc_finish(0)

</stderr_txt>
]]>

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