Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:24:43 (1812691): wrapper (7.7.26015): starting
07:24:43 (1812691): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 07:24:43] Arguments: --nthreads 12
[2026-03-08 07:24:43] Threads: 12
[2026-03-08 07:24:43] Checking for CVMFS
[2026-03-08 07:24:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 07:24:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 07:24:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 07:24:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 07:24:44] 2.13.3.0 4052807 7304 65108 157032 3 188 2585605 4096000 16345 130560 0 47694719 99.999 275926 2965 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-03-08 07:24:44] CVMFS is ok
[2026-03-08 07:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 07:24:44] Checking for apptainer binary...
[2026-03-08 07:24:44] apptainer is not installed, using version from CVMFS
[2026-03-08 07:24:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 07:24:46] epyc7v12
[2026-03-08 07:24:46] apptainer works
[2026-03-08 07:24:46] Set ATHENA_PROC_NUMBER=12
[2026-03-08 07:24:46] Set ATHENA_CORE_NUMBER=12
[2026-03-08 07:24:46] Starting ATLAS job with PandaID=7037260865
[2026-03-08 07:24:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31420/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 09:16:46]  *** The last 200 lines of the pilot log: ***
[2026-03-08 09:16:46] 2026-03-08 09:16:06,826 | INFO     | extracted standard info from prmon json
[2026-03-08 09:16:46] 2026-03-08 09:16:06,827 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 09:16:46] 2026-03-08 09:16:06,827 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 09:16:46] 2026-03-08 09:16:06,827 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 09:16:46] 2026-03-08 09:16:06,827 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 09:16:46] 2026-03-08 09:16:06,831 | INFO     | fitting pss+swap vs Time
[2026-03-08 09:16:46] 2026-03-08 09:16:06,833 | INFO     | sum of square deviations: 401533110.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,834 | INFO     | sum of deviations: 21270904228.000004
[2026-03-08 09:16:46] 2026-03-08 09:16:06,834 | INFO     | mean x: 1772958055.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,834 | INFO     | mean y: 2599522.981651376
[2026-03-08 09:16:46] 2026-03-08 09:16:06,834 | INFO     | intersect: -93918474602.55226
[2026-03-08 09:16:46] 2026-03-08 09:16:06,835 | INFO     | chi2: 2.7843888907758205
[2026-03-08 09:16:46] 2026-03-08 09:16:06,835 | INFO     | sum of square deviations: 348769330.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,835 | INFO     | sum of deviations: 27486610858.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,836 | INFO     | mean x: 1772957902.5
[2026-03-08 09:16:46] 2026-03-08 09:16:06,836 | INFO     | mean y: 2616693.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,836 | INFO     | intersect: -139724703750.09457
[2026-03-08 09:16:46] 2026-03-08 09:16:06,836 | INFO     | chi2: 2.075126796658566
[2026-03-08 09:16:46] 2026-03-08 09:16:06,839 | INFO     | current chi2=2.075126796658566 (change=25.472810082920255 %)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,839 | INFO     | sum of square deviations: 300842850.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | sum of deviations: 26155430916.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | mean x: 1772957750.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | mean y: 2612453.9292929294
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | intersect: -154139239170.9699
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | chi2: 2.073093609287962
[2026-03-08 09:16:46] 2026-03-08 09:16:06,840 | INFO     | current chi2=2.073093609287962 (change=0.09797894634090672 %)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,841 | INFO     | right removable region: 98
[2026-03-08 09:16:46] 2026-03-08 09:16:06,841 | INFO     | sum of square deviations: 348769330.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,844 | INFO     | sum of deviations: -2371181690.999999
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | mean x: 1772958207.5
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | mean y: 2667060.980769231
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | intersect: 12056496566.37959
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | chi2: 0.8717174581494305
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | current chi2=0.8717174581494305 (change=68.69268294248431 %)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,845 | INFO     | sum of square deviations: 300842850.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,846 | INFO     | sum of deviations: -7914632758.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,846 | INFO     | mean x: 1772958360.0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,846 | INFO     | mean y: 2684405.9292929294
[2026-03-08 09:16:46] 2026-03-08 09:16:06,846 | INFO     | intersect: 46646021000.51997
[2026-03-08 09:16:46] 2026-03-08 09:16:06,847 | INFO     | chi2: 0.7402554289269351
[2026-03-08 09:16:46] 2026-03-08 09:16:06,847 | INFO     | current chi2=0.7402554289269351 (change=15.08080720346891 %)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,847 | INFO     | left removable region: 20
[2026-03-08 09:16:46] 2026-03-08 09:16:06,847 | INFO     | sum of square deviations: 147126479.5
[2026-03-08 09:16:46] 2026-03-08 09:16:06,847 | INFO     | sum of deviations: -1149041597.5
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | mean x: 1772958329.5
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | mean y: 2709749.8076923075
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | intersect: 13849318994.811827
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | chi2: 0.00116891106455667
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | current memory leak: -7.81 B/s (using 78 data points, chi2=0.00)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,848 | INFO     | could have reported an average CPU frequency of 2389 MHz (7 samples)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,849 | INFO     | ..............................
[2026-03-08 09:16:46] 2026-03-08 09:16:06,849 | INFO     | . Timing measurements:
[2026-03-08 09:16:46] 2026-03-08 09:16:06,849 | INFO     | . get job = 0 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . initial setup = 15 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . payload setup = 16 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . stage-in = 0 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . payload execution = 6610 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . stage-out = 1 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | . log creation = 0 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,853 | INFO     | ..............................
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | 
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | job summary report
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | --------------------------------------------------
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | PanDA job id: 7037260865
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | task id: 48937823
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | errors: (none)
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 09:16:46] 2026-03-08 09:16:06,993 | INFO     | pilot state: finished 
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | transexitcode: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | exeerrorcode: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | exeerrordiag: 
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | exitcode: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | exitmsg: OK
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | cpuconsumptiontime: 43162 s
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | nevents: 400
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | neventsw: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | pid: 1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | pgrp: 1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:06,994 | INFO     | corecount: 12
[2026-03-08 09:16:46] 2026-03-08 09:16:06,995 | INFO     | event service: False
[2026-03-08 09:16:46] 2026-03-08 09:16:06,995 | INFO     | sizes: {0: 2295371, 1: 2295832, 6630: 2323165, 6631: 2323164, 6634: 2332264, 6636: 2332642}
[2026-03-08 09:16:46] 2026-03-08 09:16:06,995 | INFO     | --------------------------------------------------
[2026-03-08 09:16:46] 2026-03-08 09:16:06,995 | INFO     | 
[2026-03-08 09:16:46] 2026-03-08 09:16:06,995 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31420/slots/0
[2026-03-08 09:16:46] 2026-03-08 09:16:07,047 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,051 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 09:16:46] 2026-03-08 09:16:07,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,052 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 09:16:46] 2026-03-08 09:16:07,052 | INFO     | job 7037260865 has completed (purged errors)
[2026-03-08 09:16:46] 2026-03-08 09:16:07,052 | INFO     | overall cleanup function is called
[2026-03-08 09:16:46] 2026-03-08 09:16:07,861 | WARNING  | process 1821866 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 09:16:46] 2026-03-08 09:16:08,081 | INFO     | --- collectZombieJob: --- 10, [1821866]
[2026-03-08 09:16:46] 2026-03-08 09:16:08,081 | INFO     | zombie collector waiting for pid 1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:08,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 09:16:46] 2026-03-08 09:16:08,081 | INFO     | collected zombie processes
[2026-03-08 09:16:46] 2026-03-08 09:16:08,082 | INFO     | will attempt to kill all subprocesses of pid=1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:08,873 | INFO     | using path: /opt/boinc/instance_homes/boinc_31420/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:16:46] 2026-03-08 09:16:09,746 | INFO     | process IDs to be killed: [1821866] (in reverse order)
[2026-03-08 09:16:46] 2026-03-08 09:16:10,196 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 09:16:46] 2026-03-08 09:16:10,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 09:16:46] 2026-03-08 09:16:10,268 | INFO     | did not find any defunct processes belonging to 1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:10,311 | INFO     | did not find any defunct processes belonging to 1821866
[2026-03-08 09:16:46] 2026-03-08 09:16:10,311 | INFO     | ready for new job
[2026-03-08 09:16:46] 2026-03-08 09:16:10,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 09:16:46] 2026-03-08 09:16:10,313 | INFO     | **************************************
[2026-03-08 09:16:46] 2026-03-08 09:16:10,316 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 09:16:46] 2026-03-08 09:16:10,316 | INFO     | **************************************
[2026-03-08 09:16:46] 2026-03-08 09:16:10,316 | INFO     | 
[2026-03-08 09:16:46] 2026-03-08 09:16:10,347 | INFO     | architecture information:
[2026-03-08 09:16:46] 2026-03-08 09:16:10,356 | INFO     | executing command: cat /etc/os-release
[2026-03-08 09:16:46] 2026-03-08 09:16:10,401 | INFO     | number of running child processes to parent process 1821866: 1
[2026-03-08 09:16:46] 2026-03-08 09:16:10,402 | INFO     | cat /etc/os-release:
[2026-03-08 09:16:46] NAME="CentOS Linux"
[2026-03-08 09:16:46] VERSION="7 (Core)"
[2026-03-08 09:16:46] ID="centos"
[2026-03-08 09:16:46] ID_LIKE="rhel fedora"
[2026-03-08 09:16:46] VERSION_ID="7"
[2026-03-08 09:16:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 09:16:46] ANSI_COLOR="0;31"
[2026-03-08 09:16:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 09:16:46] HOME_URL="https://www.centos.org/"
[2026-03-08 09:16:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 09:16:46] 
[2026-03-08 09:16:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 09:16:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 09:16:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 09:16:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 09:16:46] 
[2026-03-08 09:16:46] 2026-03-08 09:16:10,402 | INFO     | maximum number of monitored processes: 6
[2026-03-08 09:16:46] 2026-03-08 09:16:10,402 | INFO     | **************************************
[2026-03-08 09:16:46] 2026-03-08 09:16:10,402 | INFO     | aborting job monitoring since job object (job id=7037260865) has expired
[2026-03-08 09:16:46] 2026-03-08 09:16:10,905 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31420/slots/0
[2026-03-08 09:16:46] 2026-03-08 09:16:10,949 | INFO     | sufficient remaining disk space (165384552448 B)
[2026-03-08 09:16:46] 2026-03-08 09:16:10,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 09:16:46] 2026-03-08 09:16:10,949 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 09:16:46] 2026-03-08 09:16:10,949 | INFO     | update_server=False
[2026-03-08 09:16:46] 2026-03-08 09:16:10,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 09:16:46] 2026-03-08 09:16:10,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 09:16:46] 2026-03-08 09:16:10,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:16:46] 2026-03-08 09:16:10,952 | INFO     | will abort loop
[2026-03-08 09:16:46] 2026-03-08 09:16:11,391 | INFO     | all payload control threads have been joined
[2026-03-08 09:16:46] 2026-03-08 09:16:11,702 | INFO     | all data control threads have been joined
[2026-03-08 09:16:46] 2026-03-08 09:16:11,904 | INFO     | all job control threads have been joined
[2026-03-08 09:16:46] 2026-03-08 09:16:11,956 | INFO     | [job] job monitor thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:11,957 | INFO     | [job] retrieve thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:16:46] 2026-03-08 09:16:12,204 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,262 | INFO     | [data] copytool_in thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,396 | INFO     | [payload] control thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,421 | INFO     | [payload] validate_post thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,552 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,603 | INFO     | [job] validate thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,707 | INFO     | [data] control thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 09:16:46] 2026-03-08 09:16:12,846 | INFO     | [payload] failed_post thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,909 | INFO     | [job] control thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:12,956 | INFO     | [data] copytool_out thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:13,017 | INFO     | [job] queue monitor thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:13,109 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:13,349 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:16,776 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 09:16:46] 2026-03-08 09:16:39,973 | INFO     | [monitor] cgroup control has ended
[2026-03-08 09:16:46] 2026-03-08 09:16:40,125 | INFO     | PID=1816880 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 09:16:46] 2026-03-08 09:16:40,125 | INFO     | .. there are 19 such processes running
[2026-03-08 09:16:46] 2026-03-08 09:16:40,125 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 09:16:46] 2026-03-08 09:16:40,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 09:16:46] 2026-03-08 09:16:40,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 09:16:46] 2026-03-08 09:16:40,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137406402365248)>', '<ExcThread(monitor, started 137405734582016)>']
[2026-03-08 09:16:46] 2026-03-08 09:16:41,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 09:16:46] 2026-03-08 09:16:41,133 | INFO     | [monitor] control thread has ended
[2026-03-08 09:16:46] 2026-03-08 09:16:45,467 | INFO     | all workflow threads have been joined
[2026-03-08 09:16:46] 2026-03-08 09:16:45,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 09:16:46] 2026-03-08 09:16:45,468 | INFO     | traces error code: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:45,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 09:16:46] 2026-03-08 09:16:45,855 [wrapper] ==== pilot stdout END ====
[2026-03-08 09:16:46] 2026-03-08 09:16:45,862 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 09:16:46] 2026-03-08 09:16:45,871 [wrapper] pilotpid: 1816880
[2026-03-08 09:16:46] 2026-03-08 09:16:45,880 [wrapper] Pilot exit status: 0
[2026-03-08 09:16:46] 2026-03-08 09:16:45,916 [wrapper] pandaids: 7037260865
[2026-03-08 09:16:46] 2026-03-08 09:16:46,078 [wrapper] cleanup supervisor_pilot 2016619 1816881
[2026-03-08 09:16:46] 2026-03-08 09:16:46,091 [wrapper] Test setup, not cleaning
[2026-03-08 09:16:46] 2026-03-08 09:16:46,103 [wrapper] apfmon messages muted
[2026-03-08 09:16:46] 2026-03-08 09:16:46,117 [wrapper] ==== wrapper stdout END ====
[2026-03-08 09:16:46] 2026-03-08 09:16:46,129 [wrapper] ==== wrapper stderr END ====
[2026-03-08 09:16:46]  *** Error codes and diagnostics ***
[2026-03-08 09:16:46]     "exeErrorCode": 0,
[2026-03-08 09:16:46]     "exeErrorDiag": "",
[2026-03-08 09:16:46]     "pilotErrorCode": 0,
[2026-03-08 09:16:46]     "pilotErrorDiag": "",
[2026-03-08 09:16:46]  *** Listing of results directory ***
[2026-03-08 09:16:46] total 437720
[2026-03-08 09:16:46] -rw-r--r-- 1 boinc boinc    584627 Mar  4 06:10 pilot3.tar.gz
[2026-03-08 09:16:46] -rwx------ 1 boinc boinc     36322 Mar  4 06:10 runpilot2-wrapper.sh
[2026-03-08 09:16:46] -rw-r--r-- 1 boinc boinc      5111 Mar  4 06:11 queuedata.json
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc       100 Mar  8 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 09:16:46] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 07:24 run_atlas
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc       105 Mar  8 07:24 job.xml
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc 259693507 Mar  8 07:24 EVNT.48564773._000002.pool.root.1
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc     15845 Mar  8 07:24 start_atlas.sh
[2026-03-08 09:16:46] drwxrwx--x 2 boinc boinc      4096 Mar  8 07:24 shared
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc    597953 Mar  8 07:24 input.tar.gz
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc         0 Mar  8 07:24 boinc_setup_complete
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc      6554 Mar  8 07:24 init_data.xml
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc         0 Mar  8 07:24 boinc_lockfile
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc      2549 Mar  8 07:24 pandaJob.out
[2026-03-08 09:16:46] -rw------- 1 boinc boinc    999169 Mar  8 07:25 agis_schedconf.cvmfs.json
[2026-03-08 09:16:46] -rw------- 1 boinc boinc   1521291 Mar  8 07:25 agis_ddmendpoints.agis.ALL.json
[2026-03-08 09:16:46] -rw------- 1 boinc boinc       417 Mar  8 07:25 workernode_map.json
[2026-03-08 09:16:46] drwx------ 5 boinc boinc      4096 Mar  8 07:25 pilot3
[2026-03-08 09:16:46] -rw------- 1 boinc boinc 181900699 Mar  8 09:15 HITS.48937823._000040.pool.root.1
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc       529 Mar  8 09:15 boinc_task_state.xml
[2026-03-08 09:16:46] -rw------- 1 boinc boinc      1037 Mar  8 09:15 memory_monitor_summary.json
[2026-03-08 09:16:46] -rw------- 1 boinc boinc        95 Mar  8 09:16 pilot_heartbeat.json
[2026-03-08 09:16:46] -rw------- 1 boinc boinc    415479 Mar  8 09:16 log.48937823._000040.job.log.tgz.1
[2026-03-08 09:16:46] -rw------- 1 boinc boinc      6266 Mar  8 09:16 heartbeat.json
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc      8192 Mar  8 09:16 boinc_mmap_file
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc        27 Mar  8 09:16 wrapper_checkpoint.txt
[2026-03-08 09:16:46] -rw------- 1 boinc boinc      5135 Mar  8 09:16 pilotlog.txt
[2026-03-08 09:16:46] -rw------- 1 boinc boinc    930390 Mar  8 09:16 log.48937823._000040.job.log.1
[2026-03-08 09:16:46] -rw------- 1 boinc boinc       357 Mar  8 09:16 output.list
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc       620 Mar  8 09:16 runtime_log
[2026-03-08 09:16:46] -rw------- 1 boinc boinc   1361920 Mar  8 09:16 result.tar.gz
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc      9166 Mar  8 09:16 runtime_log.err
[2026-03-08 09:16:46] -rw------- 1 boinc boinc       651 Mar  8 09:16 kWtMDmncuH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUWJLDmMqPKgm.diag
[2026-03-08 09:16:46] -rw-rw-r-- 1 boinc boinc     20839 Mar  8 09:16 stderr.txt
[2026-03-08 09:16:46] HITS file was successfully produced:
[2026-03-08 09:16:46] -rw------- 1 boinc boinc 181900699 Mar  8 09:15 shared/HITS.pool.root.1
[2026-03-08 09:16:46]  *** Contents of shared directory: ***
[2026-03-08 09:16:46] total 433188
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc 259693507 Mar  8 07:24 ATLAS.root_0
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc     15845 Mar  8 07:24 start_atlas.sh
[2026-03-08 09:16:46] -rw-r--r-- 2 boinc boinc    597953 Mar  8 07:24 input.tar.gz
[2026-03-08 09:16:46] -rw------- 1 boinc boinc 181900699 Mar  8 09:15 HITS.pool.root.1
[2026-03-08 09:16:46] -rw------- 1 boinc boinc   1361920 Mar  8 09:16 result.tar.gz
09:16:48 (1812691): run_atlas exited; CPU time 43547.117679
09:16:48 (1812691): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN