Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:24:23 (19800): wrapper (7.7.26015): starting
14:24:23 (19800): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 14:24:23] Arguments: --nthreads 8
[2026-03-04 14:24:23] Threads: 8
[2026-03-04 14:24:23] Checking for CVMFS
[2026-03-04 14:24:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 14:24:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 14:24:23] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 14:24:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 14:24:23] 2.11.0.0 4320 206705 67556 156880 3 188 2090402 4096000 3761 130560 16 2774808 98.744 9980838 374 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-03-04 14:24:23] CVMFS is ok
[2026-03-04 14:24:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 14:24:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 14:24:23] Further information can be found at the LHC@home message board.
[2026-03-04 14:24:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 14:24:23] Checking for apptainer binary...
[2026-03-04 14:24:23] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-03-04 14:24:23] apptainer is not installed, using version from CVMFS
[2026-03-04 14:24:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 14:24:24] WARNING: Environment variable TMPDIR already has value [/tmp/job_11249668/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node351
[2026-03-04 14:24:24] apptainer works
[2026-03-04 14:24:24] Set ATHENA_PROC_NUMBER=8
[2026-03-04 14:24:24] Set ATHENA_CORE_NUMBER=8
[2026-03-04 14:24:24] Starting ATLAS job with PandaID=7037242190
[2026-03-04 14:24:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11249668/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 15:12:39]  *** The last 200 lines of the pilot log: ***
[2026-03-04 15:12:39]  is_tar=False
[2026-03-04 15:12:39]  lfn=log.48937803._000109.job.log.tgz.1
[2026-03-04 15:12:39]  mtime=0
[2026-03-04 15:12:39]  protocol_id=None
[2026-03-04 15:12:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 15:12:39]  replicas=None
[2026-03-04 15:12:39]  scope=mc23_13p6TeV
[2026-03-04 15:12:39]  status=None
[2026-03-04 15:12:39]  status_code=0
[2026-03-04 15:12:39]  storage_token=
[2026-03-04 15:12:39]  surl=/tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/log.48937803._000109.job.log.tgz.1
[2026-03-04 15:12:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/72/log.48937803._000109.job.log.tgz.1
[2026-03-04 15:12:39]  workdir=None
[2026-03-04 15:12:39] ]
[2026-03-04 15:12:39] 2026-03-04 14:11:33,395 | INFO     | transferring file log.48937803._000109.job.log.tgz.1 from /tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/log.48937803._000109.job.log.tgz.1 to /tmp/j
[2026-03-04 15:12:39] 2026-03-04 14:11:33,395 | INFO     | executing command: /usr/bin/env mv /tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/log.48937803._000109.job.log.tgz.1 /tmp/job_11249668/atlas/pilot/sl
[2026-03-04 15:12:39] 2026-03-04 14:11:33,403 | INFO     | adding to output.list: log.48937803._000109.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/72/log.48937803._000109.job.log.tg
[2026-03-04 15:12:39] 2026-03-04 14:11:33,403 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 15:12:39] 2026-03-04 14:11:33,403 | INFO     | summary of transferred files:
[2026-03-04 15:12:39] 2026-03-04 14:11:33,403 | INFO     |  -- lfn=log.48937803._000109.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 15:12:39] 2026-03-04 14:11:33,403 | INFO     | stage-out finished correctly
[2026-03-04 15:12:39] 2026-03-04 14:11:34,335 | INFO     | time since job start (2824s) is within the limit (349056.0s)
[2026-03-04 15:12:39] 2026-03-04 14:11:34,514 | WARNING  | process 30196 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 15:12:39] 2026-03-04 14:11:34,514 | INFO     | using path: /tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 15:12:39] 2026-03-04 14:11:34,598 | INFO     | number of running child processes to parent process 30196: 1
[2026-03-04 15:12:39] 2026-03-04 14:11:34,598 | INFO     | maximum number of monitored processes: 6
[2026-03-04 15:12:39] 2026-03-04 14:11:36,340 | INFO     | time since job start (2826s) is within the limit (349056.0s)
[2026-03-04 15:12:39] 2026-03-04 14:11:36,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 15:12:39] 2026-03-04 14:11:36,670 | INFO     | job 7037242190 has state=finished
[2026-03-04 15:12:39] 2026-03-04 14:11:36,670 | INFO     | preparing for final server update for job 7037242190 in state='finished'
[2026-03-04 15:12:39] 2026-03-04 14:11:37,101 | INFO     | monitor loop #217: job 0:7037242190 is in state 'finished'
[2026-03-04 15:12:39] 2026-03-04 14:11:37,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,226 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,226 | INFO     | reading metadata from: /tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/jobReport.json
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | added worker_node to metadata from /tmp/job_11249668/atlas/pilot/slots/0/workernode_map.json
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | this job has now completed (state=finished)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | log transfer has been attempted: DONE
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | job 7037242190 has finished - writing final server update
[2026-03-04 15:12:39] 2026-03-04 14:11:37,227 | INFO     | total number of processed events: 400 (read)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | INFO     | using path: /tmp/job_11249668/atlas/pilot/slots/0/PanDA_Pilot-7037242190/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | INFO     | extracted standard info from prmon json
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 15:12:39] 2026-03-04 14:11:37,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | fitting pss+swap vs Time
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | sum of square deviations: 18381740.0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | sum of deviations: 242260279.99999997
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | mean x: 1772632149.0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | mean y: 3008226.3076923075
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | intersect: -23359217588.75343
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | chi2: 2.2224233774361237e-05
[2026-03-04 15:12:39] 2026-03-04 14:11:37,245 | INFO     | current memory leak: 13.18 B/s (using 39 data points, chi2=0.00)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | could have reported an average CPU frequency of 2864 MHz (5 samples)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | ..............................
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . Timing measurements:
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . get job = 0 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . initial setup = 2 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . payload setup = 2 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . stage-in = 0 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . payload execution = 2806 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . stage-out = 0 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | . log creation = 0 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,246 | INFO     | ..............................
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | 
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | job summary report
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | --------------------------------------------------
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | PanDA job id: 7037242190
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | task id: 48937803
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | errors: (none)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | pilot state: finished 
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | transexitcode: 0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,293 | INFO     | exeerrorcode: 0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | exeerrordiag: 
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | exitcode: 0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | exitmsg: OK
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | cpuconsumptiontime: 18476 s
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | nevents: 400
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | neventsw: 0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | pid: 30196
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | pgrp: 30196
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | corecount: 8
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | event service: False
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | sizes: {0: 2287161, 11: 2287161, 2812: 2321674, 2815: 2321674, 2816: 2321900}
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | --------------------------------------------------
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | 
[2026-03-04 15:12:39] 2026-03-04 14:11:37,294 | INFO     | executing command: ls -lF /tmp/job_11249668/atlas/pilot/slots/0
[2026-03-04 15:12:39] 2026-03-04 14:11:37,302 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | job 7037242190 has completed (purged errors)
[2026-03-04 15:12:39] 2026-03-04 14:11:37,303 | INFO     | overall cleanup function is called
[2026-03-04 15:12:39] 2026-03-04 14:11:38,309 | INFO     | --- collectZombieJob: --- 10, [30196]
[2026-03-04 15:12:39] 2026-03-04 14:11:38,309 | INFO     | zombie collector waiting for pid 30196
[2026-03-04 15:12:39] 2026-03-04 14:11:38,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 15:12:39] 2026-03-04 14:11:38,309 | INFO     | collected zombie processes
[2026-03-04 15:12:39] 2026-03-04 14:11:38,309 | INFO     | will attempt to kill all subprocesses of pid=30196
[2026-03-04 15:12:39] 2026-03-04 14:11:38,398 | INFO     | process IDs to be killed: [30196] (in reverse order)
[2026-03-04 15:12:39] 2026-03-04 14:11:38,427 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 15:12:39] 2026-03-04 14:11:38,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 15:12:39] 2026-03-04 14:11:38,431 | INFO     | did not find any defunct processes belonging to 30196
[2026-03-04 15:12:39] 2026-03-04 14:11:38,433 | INFO     | did not find any defunct processes belonging to 30196
[2026-03-04 15:12:39] 2026-03-04 14:11:38,433 | INFO     | ready for new job
[2026-03-04 15:12:39] 2026-03-04 14:11:38,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 15:12:39] 2026-03-04 14:11:38,434 | INFO     | **************************************
[2026-03-04 15:12:39] 2026-03-04 14:11:38,434 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 15:12:39] 2026-03-04 14:11:38,434 | INFO     | **************************************
[2026-03-04 15:12:39] 2026-03-04 14:11:38,434 | INFO     | 
[2026-03-04 15:12:39] 2026-03-04 14:11:38,447 | INFO     | architecture information:
[2026-03-04 15:12:39] 2026-03-04 14:11:38,448 | INFO     | executing command: cat /etc/os-release
[2026-03-04 15:12:39] 2026-03-04 14:11:38,454 | INFO     | cat /etc/os-release:
[2026-03-04 15:12:39] NAME="CentOS Linux"
[2026-03-04 15:12:39] VERSION="7 (Core)"
[2026-03-04 15:12:39] ID="centos"
[2026-03-04 15:12:39] ID_LIKE="rhel fedora"
[2026-03-04 15:12:39] VERSION_ID="7"
[2026-03-04 15:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 15:12:39] ANSI_COLOR="0;31"
[2026-03-04 15:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 15:12:39] HOME_URL="https://www.centos.org/"
[2026-03-04 15:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 15:12:39] 
[2026-03-04 15:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 15:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 15:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 15:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 15:12:39] 
[2026-03-04 15:12:39] 2026-03-04 14:11:38,454 | INFO     | **************************************
[2026-03-04 15:12:39] 2026-03-04 14:11:38,957 | INFO     | executing command: df -mP /tmp/job_11249668/atlas/pilot/slots/0
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | INFO     | sufficient remaining disk space (228779360256 B)
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | INFO     | update_server=False
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 15:12:39] 2026-03-04 14:11:38,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 15:12:39] 2026-03-04 14:11:38,964 | INFO     | aborting loop
[2026-03-04 15:12:39] 2026-03-04 14:11:39,060 | INFO     | all data control threads have been joined
[2026-03-04 15:12:39] 2026-03-04 14:11:39,774 | INFO     | all job control threads have been joined
[2026-03-04 15:12:39] 2026-03-04 14:11:39,968 | INFO     | [job] retrieve thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:39,968 | INFO     | [job] queue monitor thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:39,969 | INFO     | [job] job monitor thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:39,996 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,065 | INFO     | [data] control thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,280 | INFO     | all payload control threads have been joined
[2026-03-04 15:12:39] 2026-03-04 14:11:40,447 | INFO     | [payload] validate_post thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,601 | INFO     | [payload] failed_post thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,693 | INFO     | [job] validate thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,779 | INFO     | [job] control thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:40,969 | INFO     | [data] copytool_out thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:41,148 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:41,286 | INFO     | [payload] control thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:41,298 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:41,350 | INFO     | [data] copytool_in thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:42,969 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:11:49,288 | INFO     | job.realtimelogging is not enabled
[2026-03-04 15:12:39] 2026-03-04 14:11:50,293 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 15:12:39] 2026-03-04 14:12:09,521 | INFO     | PID=24400 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 15:12:39] 2026-03-04 14:12:09,521 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 15:12:39] 2026-03-04 14:12:09,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 15:12:39] 2026-03-04 14:12:09,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 15:12:39] 2026-03-04 14:12:33,889 | INFO     | [monitor] cgroup control has ended
[2026-03-04 15:12:39] 2026-03-04 14:12:34,134 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063182592)>']
[2026-03-04 15:12:39] 2026-03-04 14:12:34,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 15:12:39] 2026-03-04 14:12:34,647 | INFO     | [monitor] control thread has ended
[2026-03-04 15:12:39] 2026-03-04 14:12:39,159 | INFO     | all workflow threads have been joined
[2026-03-04 15:12:39] 2026-03-04 14:12:39,159 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 15:12:39] 2026-03-04 14:12:39,159 | INFO     | traces error code: 0
[2026-03-04 15:12:39] 2026-03-04 14:12:39,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 15:12:39] 2026-03-04 14:12:39,210 [wrapper] ==== pilot stdout END ====
[2026-03-04 15:12:39] 2026-03-04 14:12:39,212 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 15:12:39] 2026-03-04 14:12:39,213 [wrapper] pilotpid: 24400
[2026-03-04 15:12:39] 2026-03-04 14:12:39,215 [wrapper] Pilot exit status: 0
[2026-03-04 15:12:39] 2026-03-04 14:12:39,219 [wrapper] pandaids: 7037242190
[2026-03-04 15:12:39] 2026-03-04 14:12:39,242 [wrapper] cleanup supervisor_pilot 14392 24401
[2026-03-04 15:12:39] 2026-03-04 14:12:39,243 [wrapper] Test setup, not cleaning
[2026-03-04 15:12:39] 2026-03-04 14:12:39,244 [wrapper] apfmon messages muted
[2026-03-04 15:12:39] 2026-03-04 14:12:39,246 [wrapper] ==== wrapper stdout END ====
[2026-03-04 15:12:39] 2026-03-04 14:12:39,247 [wrapper] ==== wrapper stderr END ====
[2026-03-04 15:12:39]  *** Error codes and diagnostics ***
[2026-03-04 15:12:39]     "exeErrorCode": 0,
[2026-03-04 15:12:39]     "exeErrorDiag": "",
[2026-03-04 15:12:39]     "pilotErrorCode": 0,
[2026-03-04 15:12:39]     "pilotErrorDiag": "",
[2026-03-04 15:12:39]  *** Listing of results directory ***
[2026-03-04 15:12:39] total 436368
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    584627 Mar  4 05:50 pilot3.tar.gz
[2026-03-04 15:12:39] -rwx------ 1 mf493845 unix-user     36322 Mar  4 05:51 runpilot2-wrapper.sh
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      5111 Mar  4 05:52 queuedata.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       100 Mar  4 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 15:12:39] -rwxr-xr-x 1 mf493845 unix-user      7986 Mar  4 13:18 run_atlas
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       105 Mar  4 13:18 job.xml
[2026-03-04 15:12:39] drwxrwx--x 2 mf493845 unix-user       100 Mar  4 14:24 shared
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user    597941 Mar  4 14:24 input.tar.gz
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user 260158839 Mar  4 14:24 EVNT.48564744._000005.pool.root.1
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  4 14:24 start_atlas.sh
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      6390 Mar  4 14:24 init_data.xml
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user         0 Mar  4 14:24 boinc_setup_complete
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      8192 Mar  4 14:24 boinc_mmap_file
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user         0 Mar  4 14:24 boinc_lockfile
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      2538 Mar  4 14:24 pandaJob.out
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    997352 Mar  4 14:24 agis_schedconf.cvmfs.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user   1516092 Mar  4 14:24 agis_ddmendpoints.agis.ALL.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       415 Mar  4 14:24 workernode_map.json
[2026-03-04 15:12:39] drwx------ 5 mf493845 unix-user       440 Mar  4 14:24 pilot3
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user 181300712 Mar  4 15:11 HITS.48937803._000109.pool.root.1
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      1008 Mar  4 15:11 memory_monitor_summary.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    293885 Mar  4 15:11 log.48937803._000109.job.log.tgz.1
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      6285 Mar  4 15:11 heartbeat.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user        95 Mar  4 15:12 pilot_heartbeat.json
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      4828 Mar  4 15:12 pilotlog.txt
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    445920 Mar  4 15:12 log.48937803._000109.job.log.1
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       357 Mar  4 15:12 output.list
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       620 Mar  4 15:12 runtime_log
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    757760 Mar  4 15:12 result.tar.gz
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user       636 Mar  4 15:12 sJvKDmmNtH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLSHLDm7N9xJn.diag
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user      9219 Mar  4 15:12 runtime_log.err
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user     22101 Mar  4 15:12 stderr.txt
[2026-03-04 15:12:39] HITS file was successfully produced:
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user 181300712 Mar  4 15:11 shared/HITS.pool.root.1
[2026-03-04 15:12:39]  *** Contents of shared directory: ***
[2026-03-04 15:12:39] total 432456
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user    597941 Mar  4 14:24 input.tar.gz
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user 260158839 Mar  4 14:24 ATLAS.root_0
[2026-03-04 15:12:39] -rw-r--r-- 2 mf493845 unix-user     15845 Mar  4 14:24 start_atlas.sh
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user 181300712 Mar  4 15:11 HITS.pool.root.1
[2026-03-04 15:12:39] -rw------- 1 mf493845 unix-user    757760 Mar  4 15:12 result.tar.gz
15:12:40 (19800): run_atlas exited; CPU time 18509.015889
15:12:40 (19800): called boinc_finish(0)

</stderr_txt>
]]>

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