Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
06:33:07 (416989): wrapper (7.7.26015): starting
06:33:07 (416989): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 06:33:07] Arguments: --nthreads 4
[2026-03-06 06:33:07] Threads: 4
[2026-03-06 06:33:07] Checking for CVMFS
[2026-03-06 06:33:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 06:33:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 06:33:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 06:33:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 06:33:07] 2.13.3.0 11582 26268 46768 156944 2 50 32485568 33554432 0 130560 0 12212551 99.986 932139 320 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-03-06 06:33:07] CVMFS is ok
[2026-03-06 06:33:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 06:33:07] Checking for apptainer binary...
[2026-03-06 06:33:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 06:33:07] Running /usr/bin/apptainer --version
[2026-03-06 06:33:07] apptainer version 1.4.5
[2026-03-06 06:33:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 06:33:07] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-03-06 06:33:07] apptainer works
[2026-03-06 06:33:07] Set ATHENA_PROC_NUMBER=4
[2026-03-06 06:33:07] Set ATHENA_CORE_NUMBER=4
[2026-03-06 06:33:07] Starting ATLAS job with PandaID=7037260712
[2026-03-06 06:33:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 07:26:44]  *** The last 200 lines of the pilot log: ***
[2026-03-06 07:26:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/f6/log.48937817._000112.job.log.tgz.1
[2026-03-06 07:26:44]  workdir=None
[2026-03-06 07:26:44] ]
[2026-03-06 07:26:44] 2026-03-06 05:26:05,990 | INFO     | transferring file log.48937817._000112.job.log.tgz.1 from /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/log.48937817._000112.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-03-06 07:26:44] 2026-03-06 05:26:05,990 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/log.48937817._000112.job.log.tgz.1 /home/ek/BOINC/slots/0/log.48937817._000112.job
[2026-03-06 07:26:44] 2026-03-06 05:26:05,998 | INFO     | adding to output.list: log.48937817._000112.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/f6/log.48937817._000112.job.log.tg
[2026-03-06 07:26:44] 2026-03-06 05:26:05,998 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 07:26:44] 2026-03-06 05:26:05,999 | INFO     | summary of transferred files:
[2026-03-06 07:26:44] 2026-03-06 05:26:05,999 | INFO     |  -- lfn=log.48937817._000112.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 07:26:44] 2026-03-06 05:26:05,999 | INFO     | stage-out finished correctly
[2026-03-06 07:26:44] 2026-03-06 05:26:07,247 | INFO     | time since job start (3171s) is within the limit (349056.0s)
[2026-03-06 07:26:44] 2026-03-06 05:26:08,522 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 07:26:44] 2026-03-06 05:26:09,250 | INFO     | time since job start (3173s) is within the limit (349056.0s)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,787 | WARNING  | process 425447 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 07:26:44] 2026-03-06 05:26:09,787 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,787 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,787 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-06 07:26:44] 2026-03-06 05:26:09,787 | WARNING  | maxPSS not found in memory monitor output
[2026-03-06 07:26:44] 2026-03-06 05:26:09,788 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2356517 B
[2026-03-06 07:26:44] 2026-03-06 05:26:09,788 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16070 B
[2026-03-06 07:26:44] 2026-03-06 05:26:09,788 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-03-06 07:26:44] 2026-03-06 05:26:09,793 | INFO     | sufficient remaining disk space (57005834240 B)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,794 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,794 | INFO     | size of work directory /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712: 2648239 B (within 5033164800 B limit)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,794 | INFO     | pfn file=/home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/HITS.48937817._000112.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,794 | INFO     | total size of present files: 0 B (workdir size: 2648239 B)
[2026-03-06 07:26:44] 2026-03-06 05:26:09,794 | INFO     | output file size check: skipping output file /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/HITS.48937817._000112.pool.root.1 since it does not exist
[2026-03-06 07:26:44] 2026-03-06 05:26:09,883 | INFO     | number of running child processes to parent process 425447: 1
[2026-03-06 07:26:44] 2026-03-06 05:26:09,883 | INFO     | maximum number of monitored processes: 6
[2026-03-06 07:26:44] 2026-03-06 05:26:10,772 | INFO     | job 7037260712 has state=finished
[2026-03-06 07:26:44] 2026-03-06 05:26:10,772 | INFO     | preparing for final server update for job 7037260712 in state='finished'
[2026-03-06 07:26:44] 2026-03-06 05:26:11,256 | INFO     | time since job start (3175s) is within the limit (349056.0s)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,618 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,618 | INFO     | reading metadata from: /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/jobReport.json
[2026-03-06 07:26:44] 2026-03-06 05:26:11,619 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/0/workernode_map.json
[2026-03-06 07:26:44] 2026-03-06 05:26:11,619 | INFO     | this job has now completed (state=finished)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,619 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,619 | INFO     | log transfer has been attempted: DONE
[2026-03-06 07:26:44] 2026-03-06 05:26:11,620 | INFO     | job 7037260712 has finished - writing final server update
[2026-03-06 07:26:44] 2026-03-06 05:26:11,620 | INFO     | total number of processed events: 400 (read)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,621 | INFO     | using path: /home/ek/BOINC/slots/0/PanDA_Pilot-7037260712/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,621 | INFO     | extracted standard info from prmon json
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | fitting pss+swap vs Time
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | sum of square deviations: 28247522.79999997
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | sum of deviations: -4895887400.266666
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | mean x: 1772773259.0666666
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | mean y: 2689318.0888888887
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | intersect: 307261429280.73706
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | chi2: 0.10198485166294455
[2026-03-06 07:26:44] 2026-03-06 05:26:11,622 | INFO     | current memory leak: -173.32 B/s (using 45 data points, chi2=0.10)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | could have reported an average CPU frequency of 3013 MHz (5 samples)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | ..............................
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . Timing measurements:
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . get job = 0 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . initial setup = 4 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . payload setup = 2 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . stage-in = 0 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . payload execution = 3152 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . stage-out = 0 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | . log creation = 0 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,623 | INFO     | ..............................
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | 
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | job summary report
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | --------------------------------------------------
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | PanDA job id: 7037260712
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | task id: 48937817
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | errors: (none)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | pilot state: finished 
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | transexitcode: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | exeerrorcode: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | exeerrordiag: 
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | exitcode: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | exitmsg: OK
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | cpuconsumptiontime: 11907 s
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | nevents: 400
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | neventsw: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:11,649 | INFO     | pid: 425447
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | pgrp: 425447
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | corecount: 4
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | event service: False
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | sizes: {0: 2295789, 10: 2295789, 3158: 2321306, 3159: 2330304, 3161: 2330360, 3164: 2330614}
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | --------------------------------------------------
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | 
[2026-03-06 07:26:44] 2026-03-06 05:26:11,650 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/0
[2026-03-06 07:26:44] 2026-03-06 05:26:11,658 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | job 7037260712 has completed (purged errors)
[2026-03-06 07:26:44] 2026-03-06 05:26:11,659 | INFO     | overall cleanup function is called
[2026-03-06 07:26:44] 2026-03-06 05:26:12,666 | INFO     | --- collectZombieJob: --- 10, [425447]
[2026-03-06 07:26:44] 2026-03-06 05:26:12,666 | INFO     | zombie collector waiting for pid 425447
[2026-03-06 07:26:44] 2026-03-06 05:26:12,666 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 07:26:44] 2026-03-06 05:26:12,666 | INFO     | collected zombie processes
[2026-03-06 07:26:44] 2026-03-06 05:26:12,666 | INFO     | will attempt to kill all subprocesses of pid=425447
[2026-03-06 07:26:44] 2026-03-06 05:26:12,758 | INFO     | process IDs to be killed: [425447] (in reverse order)
[2026-03-06 07:26:44] 2026-03-06 05:26:12,790 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 07:26:44] 2026-03-06 05:26:12,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 07:26:44] 2026-03-06 05:26:12,792 | INFO     | did not find any defunct processes belonging to 425447
[2026-03-06 07:26:44] 2026-03-06 05:26:12,795 | INFO     | did not find any defunct processes belonging to 425447
[2026-03-06 07:26:44] 2026-03-06 05:26:12,795 | INFO     | ready for new job
[2026-03-06 07:26:44] 2026-03-06 05:26:12,795 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 07:26:44] 2026-03-06 05:26:12,795 | INFO     | **************************************
[2026-03-06 07:26:44] 2026-03-06 05:26:12,795 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 07:26:44] 2026-03-06 05:26:12,796 | INFO     | **************************************
[2026-03-06 07:26:44] 2026-03-06 05:26:12,796 | INFO     | 
[2026-03-06 07:26:44] 2026-03-06 05:26:12,796 | INFO     | architecture information:
[2026-03-06 07:26:44] 2026-03-06 05:26:12,796 | INFO     | executing command: cat /etc/os-release
[2026-03-06 07:26:44] 2026-03-06 05:26:12,802 | INFO     | cat /etc/os-release:
[2026-03-06 07:26:44] NAME="CentOS Linux"
[2026-03-06 07:26:44] VERSION="7 (Core)"
[2026-03-06 07:26:44] ID="centos"
[2026-03-06 07:26:44] ID_LIKE="rhel fedora"
[2026-03-06 07:26:44] VERSION_ID="7"
[2026-03-06 07:26:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 07:26:44] ANSI_COLOR="0;31"
[2026-03-06 07:26:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 07:26:44] HOME_URL="https://www.centos.org/"
[2026-03-06 07:26:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 07:26:44] 
[2026-03-06 07:26:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 07:26:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 07:26:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 07:26:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 07:26:44] 
[2026-03-06 07:26:44] 2026-03-06 05:26:12,802 | INFO     | **************************************
[2026-03-06 07:26:44] 2026-03-06 05:26:13,304 | INFO     | executing command: df -mP /home/ek/BOINC/slots/0
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | INFO     | sufficient remaining disk space (57008979968 B)
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | INFO     | update_server=False
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 07:26:44] 2026-03-06 05:26:13,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:26:44] 2026-03-06 05:26:13,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 07:26:44] 2026-03-06 05:26:13,391 | INFO     | aborting loop
[2026-03-06 07:26:44] 2026-03-06 05:26:13,404 | INFO     | all payload control threads have been joined
[2026-03-06 07:26:44] 2026-03-06 05:26:14,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 07:26:44] 2026-03-06 05:26:14,316 | INFO     | [job] retrieve thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:14,317 | INFO     | [job] queue monitor thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:14,397 | INFO     | [job] job monitor thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:14,409 | INFO     | [payload] control thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:14,409 | INFO     | all data control threads have been joined
[2026-03-06 07:26:44] 2026-03-06 05:26:14,504 | INFO     | [payload] validate_post thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:14,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 07:26:44] 2026-03-06 05:26:14,612 | INFO     | all job control threads have been joined
[2026-03-06 07:26:44] 2026-03-06 05:26:15,100 | INFO     | [job] validate thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,197 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,235 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,323 | INFO     | [data] copytool_in thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,414 | INFO     | [data] control thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,474 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,617 | INFO     | [job] control thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:15,666 | INFO     | [payload] failed_post thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:16,040 | INFO     | [data] copytool_out thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:18,554 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:20,244 | INFO     | [monitor] cgroup control has ended
[2026-03-06 07:26:44] 2026-03-06 05:26:23,399 | INFO     | job.realtimelogging is not enabled
[2026-03-06 07:26:44] 2026-03-06 05:26:24,405 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 07:26:44] 2026-03-06 05:26:24,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286435469120)>', '<ExcThread(monitor, started 140285946345216)>']
[2026-03-06 07:26:44] 2026-03-06 05:26:29,842 | INFO     | all workflow threads have been joined
[2026-03-06 07:26:44] 2026-03-06 05:26:29,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 07:26:44] 2026-03-06 05:26:29,842 | INFO     | traces error code: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:29,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 07:26:44] 2026-03-06 05:26:44,424 | INFO     | PID=420807 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-06 07:26:44] 2026-03-06 05:26:44,424 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 07:26:44] 2026-03-06 05:26:44,424 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 07:26:44] 2026-03-06 05:26:44,424 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 07:26:44] 2026-03-06 05:26:44,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 07:26:44] 2026-03-06 05:26:44,425 | INFO     | [monitor] control thread has ended
[2026-03-06 07:26:44] 2026-03-06 05:26:44,463 [wrapper] ==== pilot stdout END ====
[2026-03-06 07:26:44] 2026-03-06 05:26:44,465 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 07:26:44] 2026-03-06 05:26:44,466 [wrapper] pilotpid: 420807
[2026-03-06 07:26:44] 2026-03-06 05:26:44,468 [wrapper] Pilot exit status: 0
[2026-03-06 07:26:44] 2026-03-06 05:26:44,473 [wrapper] pandaids: 7037260712
[2026-03-06 07:26:44] 2026-03-06 05:26:44,493 [wrapper] cleanup supervisor_pilot  460682 420808
[2026-03-06 07:26:44] 2026-03-06 05:26:44,495 [wrapper] Test setup, not cleaning
[2026-03-06 07:26:44] 2026-03-06 05:26:44,496 [wrapper] apfmon messages muted
[2026-03-06 07:26:44] 2026-03-06 05:26:44,498 [wrapper] ==== wrapper stdout END ====
[2026-03-06 07:26:44] 2026-03-06 05:26:44,499 [wrapper] ==== wrapper stderr END ====
[2026-03-06 07:26:44]  *** Error codes and diagnostics ***
[2026-03-06 07:26:44]     "exeErrorCode": 0,
[2026-03-06 07:26:44]     "exeErrorDiag": "",
[2026-03-06 07:26:44]     "pilotErrorCode": 0,
[2026-03-06 07:26:44]     "pilotErrorDiag": "",
[2026-03-06 07:26:44]  *** Listing of results directory ***
[2026-03-06 07:26:44] total 438748
[2026-03-06 07:26:44] -rw-r--r-- 1 ek ek    584627 Mar  4 08:10 pilot3.tar.gz
[2026-03-06 07:26:44] -rw-r--r-- 1 ek ek      5111 Mar  4 08:10 queuedata.json
[2026-03-06 07:26:44] -rwx------ 1 ek ek     36322 Mar  4 08:10 runpilot2-wrapper.sh
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek       100 Mar  6 06:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 07:26:44] -rwxr-xr-x 1 ek ek      7986 Mar  6 06:33 run_atlas
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek       105 Mar  6 06:33 job.xml
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek 261566153 Mar  6 06:33 EVNT.48564763._000005.pool.root.1
[2026-03-06 07:26:44] drwxrwx--x 2 ek ek      4096 Mar  6 06:33 shared
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek    597953 Mar  6 06:33 input.tar.gz
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek     15845 Mar  6 06:33 start_atlas.sh
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek         0 Mar  6 06:33 boinc_setup_complete
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek      9840 Mar  6 06:33 init_data.xml
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek         0 Mar  6 06:33 boinc_lockfile
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek      2557 Mar  6 06:33 pandaJob.out
[2026-03-06 07:26:44] -rw------- 1 ek ek        50 Mar  6 06:33 setup.sh.local
[2026-03-06 07:26:44] -rw------- 1 ek ek    998552 Mar  6 06:33 agis_schedconf.cvmfs.json
[2026-03-06 07:26:44] -rw------- 1 ek ek   1521291 Mar  6 06:33 agis_ddmendpoints.agis.ALL.json
[2026-03-06 07:26:44] -rw------- 1 ek ek       433 Mar  6 06:33 workernode_map.json
[2026-03-06 07:26:44] drwx------ 5 ek ek      4096 Mar  6 06:33 pilot3
[2026-03-06 07:26:44] -rw------- 1 ek ek 182311605 Mar  6 07:25 HITS.48937817._000112.pool.root.1
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek       529 Mar  6 07:25 boinc_task_state.xml
[2026-03-06 07:26:44] -rw------- 1 ek ek      1039 Mar  6 07:26 memory_monitor_summary.json
[2026-03-06 07:26:44] -rw------- 1 ek ek    244534 Mar  6 07:26 log.48937817._000112.job.log.tgz.1
[2026-03-06 07:26:44] -rw------- 1 ek ek      6313 Mar  6 07:26 heartbeat.json
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek      8192 Mar  6 07:26 boinc_mmap_file
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek        27 Mar  6 07:26 wrapper_checkpoint.txt
[2026-03-06 07:26:44] -rw------- 1 ek ek       746 Mar  6 07:26 pilotlog.txt
[2026-03-06 07:26:44] -rw------- 1 ek ek        95 Mar  6 07:26 pilot_heartbeat.json
[2026-03-06 07:26:44] -rw------- 1 ek ek    483589 Mar  6 07:26 log.48937817._000112.job.log.1
[2026-03-06 07:26:44] -rw------- 1 ek ek       357 Mar  6 07:26 output.list
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek       620 Mar  6 07:26 runtime_log
[2026-03-06 07:26:44] -rw------- 1 ek ek    747520 Mar  6 07:26 result.tar.gz
[2026-03-06 07:26:44] -rw------- 1 ek ek       659 Mar  6 07:26 ViFODmicuH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFYHLDmjsrKIn.diag
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek      9501 Mar  6 07:26 runtime_log.err
[2026-03-06 07:26:44] -rw-rw-r-- 1 ek ek     22426 Mar  6 07:26 stderr.txt
[2026-03-06 07:26:44] HITS file was successfully produced:
[2026-03-06 07:26:44] -rw------- 1 ek ek 182311605 Mar  6 07:25 shared/HITS.pool.root.1
[2026-03-06 07:26:44]  *** Contents of shared directory: ***
[2026-03-06 07:26:44] total 434816
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek 261566153 Mar  6 06:33 ATLAS.root_0
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek    597953 Mar  6 06:33 input.tar.gz
[2026-03-06 07:26:44] -rw-r--r-- 2 ek ek     15845 Mar  6 06:33 start_atlas.sh
[2026-03-06 07:26:44] -rw------- 1 ek ek 182311605 Mar  6 07:25 HITS.pool.root.1
[2026-03-06 07:26:44] -rw------- 1 ek ek    747520 Mar  6 07:26 result.tar.gz
07:26:45 (416989): run_atlas exited; CPU time 11932.885023
07:26:45 (416989): called boinc_finish(0)

</stderr_txt>
]]>

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