Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:30:03 (843309): wrapper (7.7.26015): starting
05:30:03 (843309): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 05:30:03] Arguments: --nthreads 8
[2026-03-04 05:30:03] Threads: 8
[2026-03-04 05:30:03] Checking for CVMFS
[2026-03-04 05:30:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 05:30:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 05:30:05] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 05:30:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 05:30:06] 2.13.0.0 546281 175 53948 156880 0 188 5727336 6144001 10153 130560 0 720976 99.997 5616 924 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-04 05:30:06] CVMFS is ok
[2026-03-04 05:30:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 05:30:06] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-04 05:30:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-04 05:30:06] Further information can be found at the LHC@home message board.
[2026-03-04 05:30:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 05:30:06] Checking for apptainer binary...
[2026-03-04 05:30:06] apptainer is not installed, using version from CVMFS
[2026-03-04 05:30:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 05:30:06] mz32
[2026-03-04 05:30:06] apptainer works
[2026-03-04 05:30:06] Set ATHENA_PROC_NUMBER=8
[2026-03-04 05:30:06] Set ATHENA_CORE_NUMBER=8
[2026-03-04 05:30:06] Starting ATLAS job with PandaID=7037224057
[2026-03-04 05:30:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 07:11:10]  *** The last 200 lines of the pilot log: ***
[2026-03-04 07:11:10]  lfn=log.48937803._000044.job.log.tgz.1
[2026-03-04 07:11:10]  mtime=0
[2026-03-04 07:11:10]  protocol_id=None
[2026-03-04 07:11:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 07:11:10]  replicas=None
[2026-03-04 07:11:10]  scope=mc23_13p6TeV
[2026-03-04 07:11:10]  status=None
[2026-03-04 07:11:10]  status_code=0
[2026-03-04 07:11:10]  storage_token=
[2026-03-04 07:11:10]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/log.48937803._000044.job.log.tgz.1
[2026-03-04 07:11:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/e3/log.48937803._000044.job.log.tgz.1
[2026-03-04 07:11:10]  workdir=None
[2026-03-04 07:11:10] ]
[2026-03-04 07:11:10] 2026-03-04 15:10:30,561 | INFO     | transferring file log.48937803._000044.job.log.tgz.1 from /var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/log.48937803._000044.job.log.tgz.1 to /var/lib/boinc
[2026-03-04 07:11:10] 2026-03-04 15:10:30,561 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/log.48937803._000044.job.log.tgz.1 /var/lib/boinc-client/slots/8/log.489378
[2026-03-04 07:11:10] 2026-03-04 15:10:30,585 | INFO     | adding to output.list: log.48937803._000044.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/e3/log.48937803._000044.job.log.tg
[2026-03-04 07:11:10] 2026-03-04 15:10:30,587 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 07:11:10] 2026-03-04 15:10:30,587 | INFO     | summary of transferred files:
[2026-03-04 07:11:10] 2026-03-04 15:10:30,587 | INFO     |  -- lfn=log.48937803._000044.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 07:11:10] 2026-03-04 15:10:30,587 | INFO     | stage-out finished correctly
[2026-03-04 07:11:10] 2026-03-04 15:10:30,705 | INFO     | time since job start (5993s) is within the limit (349056.0s)
[2026-03-04 07:11:10] 2026-03-04 15:10:32,710 | INFO     | time since job start (5995s) is within the limit (349056.0s)
[2026-03-04 07:11:10] 2026-03-04 15:10:32,782 | WARNING  | process 853447 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 07:11:10] 2026-03-04 15:10:32,782 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 07:11:10] 2026-03-04 15:10:33,444 | INFO     | number of running child processes to parent process 853447: 1
[2026-03-04 07:11:10] 2026-03-04 15:10:33,444 | INFO     | maximum number of monitored processes: 6
[2026-03-04 07:11:10] 2026-03-04 15:10:33,460 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 07:11:10] 2026-03-04 15:10:34,715 | INFO     | time since job start (5997s) is within the limit (349056.0s)
[2026-03-04 07:11:10] 2026-03-04 15:10:35,947 | INFO     | monitor loop #424: job 0:7037224057 is in state 'finished'
[2026-03-04 07:11:10] 2026-03-04 15:10:35,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,478 | INFO     | job 7037224057 has state=finished
[2026-03-04 07:11:10] 2026-03-04 15:10:36,478 | INFO     | preparing for final server update for job 7037224057 in state='finished'
[2026-03-04 07:11:10] 2026-03-04 15:10:36,478 | INFO     | reading metadata from: /var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/jobReport.json
[2026-03-04 07:11:10] 2026-03-04 15:10:36,481 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/8/workernode_map.json
[2026-03-04 07:11:10] 2026-03-04 15:10:36,482 | INFO     | this job has now completed (state=finished)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,482 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,482 | INFO     | log transfer has been attempted: DONE
[2026-03-04 07:11:10] 2026-03-04 15:10:36,482 | INFO     | job 7037224057 has finished - writing final server update
[2026-03-04 07:11:10] 2026-03-04 15:10:36,482 | INFO     | total number of processed events: 400 (read)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,512 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-7037224057/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,513 | INFO     | extracted standard info from prmon json
[2026-03-04 07:11:10] 2026-03-04 15:10:36,513 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 07:11:10] 2026-03-04 15:10:36,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 07:11:10] 2026-03-04 15:10:36,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 07:11:10] 2026-03-04 15:10:36,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 07:11:10] 2026-03-04 15:10:36,516 | INFO     | fitting pss+swap vs Time
[2026-03-04 07:11:10] 2026-03-04 15:10:36,517 | INFO     | sum of square deviations: 233641590.0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,517 | INFO     | sum of deviations: 2774229980.0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,517 | INFO     | mean x: 1772634113.0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,518 | INFO     | mean y: 2548956.8021978023
[2026-03-04 07:11:10] 2026-03-04 15:10:36,518 | INFO     | intersect: -21045478921.519073
[2026-03-04 07:11:10] 2026-03-04 15:10:36,518 | INFO     | chi2: 0.022368508437506637
[2026-03-04 07:11:10] 2026-03-04 15:10:36,518 | INFO     | current memory leak: 11.87 B/s (using 91 data points, chi2=0.02)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,518 | INFO     | could have reported an average CPU frequency of 1968 MHz (7 samples)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | ..............................
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . Timing measurements:
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . get job = 0 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . initial setup = 15 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . payload setup = 7 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . stage-in = 0 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . payload execution = 5967 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . stage-out = 1 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,519 | INFO     | . log creation = 0 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,520 | INFO     | ..............................
[2026-03-04 07:11:10] 2026-03-04 15:10:36,720 | INFO     | time since job start (5999s) is within the limit (349056.0s)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,781 | INFO     | 
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | job summary report
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | --------------------------------------------------
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | PanDA job id: 7037224057
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | task id: 48937803
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | errors: (none)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 07:11:10] 2026-03-04 15:10:36,782 | INFO     | pilot state: finished 
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | transexitcode: 0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | exeerrorcode: 0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | exeerrordiag: 
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | exitcode: 0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | exitmsg: OK
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | cpuconsumptiontime: 44408 s
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | nevents: 400
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | neventsw: 0
[2026-03-04 07:11:10] 2026-03-04 15:10:36,783 | INFO     | pid: 853447
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | pgrp: 853447
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | corecount: 8
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | event service: False
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | sizes: {0: 2286776, 1: 2287066, 11: 2287066, 5979: 2313986, 5980: 2313985, 5982: 2323053, 5985: 2323237, 5988: 2323431}
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | --------------------------------------------------
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | 
[2026-03-04 07:11:10] 2026-03-04 15:10:36,784 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-03-04 07:11:10] 2026-03-04 15:10:36,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | job 7037224057 has completed (purged errors)
[2026-03-04 07:11:10] 2026-03-04 15:10:36,815 | INFO     | overall cleanup function is called
[2026-03-04 07:11:10] 2026-03-04 15:10:37,824 | INFO     | --- collectZombieJob: --- 10, [853447]
[2026-03-04 07:11:10] 2026-03-04 15:10:37,824 | INFO     | zombie collector waiting for pid 853447
[2026-03-04 07:11:10] 2026-03-04 15:10:37,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 07:11:10] 2026-03-04 15:10:37,825 | INFO     | collected zombie processes
[2026-03-04 07:11:10] 2026-03-04 15:10:37,825 | INFO     | will attempt to kill all subprocesses of pid=853447
[2026-03-04 07:11:10] 2026-03-04 15:10:38,455 | INFO     | process IDs to be killed: [853447] (in reverse order)
[2026-03-04 07:11:10] 2026-03-04 15:10:38,662 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 07:11:10] 2026-03-04 15:10:38,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 07:11:10] 2026-03-04 15:10:38,678 | INFO     | did not find any defunct processes belonging to 853447
[2026-03-04 07:11:10] 2026-03-04 15:10:38,691 | INFO     | did not find any defunct processes belonging to 853447
[2026-03-04 07:11:10] 2026-03-04 15:10:38,691 | INFO     | ready for new job
[2026-03-04 07:11:10] 2026-03-04 15:10:38,692 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 07:11:10] 2026-03-04 15:10:38,693 | INFO     | **************************************
[2026-03-04 07:11:10] 2026-03-04 15:10:38,694 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 07:11:10] 2026-03-04 15:10:38,694 | INFO     | **************************************
[2026-03-04 07:11:10] 2026-03-04 15:10:38,694 | INFO     | 
[2026-03-04 07:11:10] 2026-03-04 15:10:38,702 | INFO     | architecture information:
[2026-03-04 07:11:10] 2026-03-04 15:10:38,703 | INFO     | executing command: cat /etc/os-release
[2026-03-04 07:11:10] 2026-03-04 15:10:38,724 | INFO     | cat /etc/os-release:
[2026-03-04 07:11:10] NAME="CentOS Linux"
[2026-03-04 07:11:10] VERSION="7 (Core)"
[2026-03-04 07:11:10] ID="centos"
[2026-03-04 07:11:10] ID_LIKE="rhel fedora"
[2026-03-04 07:11:10] VERSION_ID="7"
[2026-03-04 07:11:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 07:11:10] ANSI_COLOR="0;31"
[2026-03-04 07:11:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 07:11:10] HOME_URL="https://www.centos.org/"
[2026-03-04 07:11:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 07:11:10] 
[2026-03-04 07:11:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 07:11:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 07:11:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 07:11:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 07:11:10] 
[2026-03-04 07:11:10] 2026-03-04 15:10:38,724 | INFO     | **************************************
[2026-03-04 07:11:10] 2026-03-04 15:10:39,228 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-03-04 07:11:10] 2026-03-04 15:10:39,256 | INFO     | sufficient remaining disk space (366778253312 B)
[2026-03-04 07:11:10] 2026-03-04 15:10:39,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 07:11:10] 2026-03-04 15:10:39,257 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 07:11:10] 2026-03-04 15:10:39,257 | INFO     | update_server=False
[2026-03-04 07:11:10] 2026-03-04 15:10:39,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 07:11:10] 2026-03-04 15:10:39,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 07:11:10] 2026-03-04 15:10:39,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:11:10] 2026-03-04 15:10:39,457 | INFO     | aborting loop
[2026-03-04 07:11:10] 2026-03-04 15:10:39,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 07:11:10] 2026-03-04 15:10:39,783 | INFO     | all job control threads have been joined
[2026-03-04 07:11:10] 2026-03-04 15:10:40,186 | INFO     | all payload control threads have been joined
[2026-03-04 07:11:10] 2026-03-04 15:10:40,211 | INFO     | all data control threads have been joined
[2026-03-04 07:11:10] 2026-03-04 15:10:40,263 | INFO     | [job] retrieve thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:40,330 | INFO     | [data] copytool_in thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:40,462 | INFO     | [job] job monitor thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:40,786 | INFO     | [job] control thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:40,850 | INFO     | [payload] validate_post thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:40,979 | INFO     | [job] validate thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,180 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,192 | INFO     | [payload] control thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,217 | INFO     | [data] control thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,263 | INFO     | [data] copytool_out thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,487 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,566 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:41,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:11:10] 2026-03-04 15:10:41,826 | INFO     | [payload] failed_post thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:42,654 | INFO     | [job] queue monitor thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:43,595 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 07:11:10] 2026-03-04 15:10:46,690 | INFO     | [monitor] cgroup control has ended
[2026-03-04 07:11:10] 2026-03-04 15:10:47,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129801878431552)>', '<ExcThread(monitor, started 129801184585472)>']
[2026-03-04 07:11:10] 2026-03-04 15:10:52,772 | INFO     | all workflow threads have been joined
[2026-03-04 07:11:10] 2026-03-04 15:10:52,772 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 07:11:10] 2026-03-04 15:10:52,773 | INFO     | traces error code: 0
[2026-03-04 07:11:10] 2026-03-04 15:10:52,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 07:11:10] 2026-03-04 15:11:10,399 | INFO     | PID=848073 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 07:11:10] 2026-03-04 15:11:10,399 | INFO     | .. there are 14 such processes running
[2026-03-04 07:11:10] 2026-03-04 15:11:10,400 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 07:11:10] 2026-03-04 15:11:10,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 07:11:10] 2026-03-04 15:11:10,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 07:11:10] 2026-03-04 15:11:10,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 07:11:10] 2026-03-04 15:11:10,400 | INFO     | [monitor] control thread has ended
[2026-03-04 07:11:10] 2026-03-04 15:11:10,542 [wrapper] ==== pilot stdout END ====
[2026-03-04 07:11:10] 2026-03-04 15:11:10,546 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 07:11:10] 2026-03-04 15:11:10,551 [wrapper] pilotpid: 848073
[2026-03-04 07:11:10] 2026-03-04 15:11:10,555 [wrapper] Pilot exit status: 0
[2026-03-04 07:11:10] 2026-03-04 15:11:10,570 [wrapper] pandaids: 7037224057
[2026-03-04 07:11:10] 2026-03-04 15:11:10,692 [wrapper] cleanup supervisor_pilot 1051966 848074
[2026-03-04 07:11:10] 2026-03-04 15:11:10,696 [wrapper] Test setup, not cleaning
[2026-03-04 07:11:10] 2026-03-04 15:11:10,701 [wrapper] apfmon messages muted
[2026-03-04 07:11:10] 2026-03-04 15:11:10,706 [wrapper] ==== wrapper stdout END ====
[2026-03-04 07:11:10] 2026-03-04 15:11:10,711 [wrapper] ==== wrapper stderr END ====
[2026-03-04 07:11:10]  *** Error codes and diagnostics ***
[2026-03-04 07:11:10]     "exeErrorCode": 0,
[2026-03-04 07:11:10]     "exeErrorDiag": "",
[2026-03-04 07:11:10]     "pilotErrorCode": 0,
[2026-03-04 07:11:10]     "pilotErrorDiag": "",
[2026-03-04 07:11:10]  *** Listing of results directory ***
[2026-03-04 07:11:10] total 435964
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc      5111 Mar  3 20:50 queuedata.json
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc    584627 Mar  3 20:50 pilot3.tar.gz
[2026-03-04 07:11:10] -rwx------ 1 boinc boinc     36322 Mar  3 20:50 runpilot2-wrapper.sh
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc       100 Mar  4 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 07:11:10] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 05:30 run_atlas
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc       105 Mar  4 05:30 job.xml
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc 259771611 Mar  4 05:30 EVNT.48564744._000002.pool.root.1
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc    597938 Mar  4 05:30 input.tar.gz
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:30 start_atlas.sh
[2026-03-04 07:11:10] drwxrwx--x 2 boinc boinc      4096 Mar  4 05:30 shared
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:30 boinc_setup_complete
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc      9890 Mar  4 05:30 init_data.xml
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:30 boinc_lockfile
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc      2536 Mar  4 05:30 pandaJob.out
[2026-03-04 07:11:10] -rw------- 1 boinc boinc    997352 Mar  4 05:30 agis_schedconf.cvmfs.json
[2026-03-04 07:11:10] -rw------- 1 boinc boinc   1516092 Mar  4 05:30 agis_ddmendpoints.agis.ALL.json
[2026-03-04 07:11:10] -rw------- 1 boinc boinc       417 Mar  4 05:30 workernode_map.json
[2026-03-04 07:11:10] drwx------ 5 boinc boinc      4096 Mar  4 05:30 pilot3
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc       529 Mar  4 07:09 boinc_task_state.xml
[2026-03-04 07:11:10] -rw------- 1 boinc boinc 180299107 Mar  4 07:09 HITS.48937803._000044.pool.root.1
[2026-03-04 07:11:10] -rw------- 1 boinc boinc      1022 Mar  4 07:10 memory_monitor_summary.json
[2026-03-04 07:11:10] -rw------- 1 boinc boinc    353066 Mar  4 07:10 log.48937803._000044.job.log.tgz.1
[2026-03-04 07:11:10] -rw------- 1 boinc boinc      6256 Mar  4 07:10 heartbeat.json
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc      8192 Mar  4 07:10 boinc_mmap_file
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc        27 Mar  4 07:10 wrapper_checkpoint.txt
[2026-03-04 07:11:10] -rw------- 1 boinc boinc       822 Mar  4 07:11 pilotlog.txt
[2026-03-04 07:11:10] -rw------- 1 boinc boinc        95 Mar  4 07:11 pilot_heartbeat.json
[2026-03-04 07:11:10] -rw------- 1 boinc boinc    858770 Mar  4 07:11 log.48937803._000044.job.log.1
[2026-03-04 07:11:10] -rw------- 1 boinc boinc       357 Mar  4 07:11 output.list
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc       620 Mar  4 07:11 runtime_log
[2026-03-04 07:11:10] -rw------- 1 boinc boinc   1228800 Mar  4 07:11 result.tar.gz
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc      8897 Mar  4 07:11 runtime_log.err
[2026-03-04 07:11:10] -rw------- 1 boinc boinc       646 Mar  4 07:11 juILDmoMtH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlPHLDmu0AWim.diag
[2026-03-04 07:11:10] -rw-r--r-- 1 boinc boinc     21816 Mar  4 07:11 stderr.txt
[2026-03-04 07:11:10] HITS file was successfully produced:
[2026-03-04 07:11:10] -rw------- 1 boinc boinc 180299107 Mar  4 07:09 shared/HITS.pool.root.1
[2026-03-04 07:11:10]  *** Contents of shared directory: ***
[2026-03-04 07:11:10] total 431568
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc 259771611 Mar  4 05:30 ATLAS.root_0
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc    597938 Mar  4 05:30 input.tar.gz
[2026-03-04 07:11:10] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:30 start_atlas.sh
[2026-03-04 07:11:10] -rw------- 1 boinc boinc 180299107 Mar  4 07:09 HITS.pool.root.1
[2026-03-04 07:11:10] -rw------- 1 boinc boinc   1228800 Mar  4 07:11 result.tar.gz
07:11:12 (843309): run_atlas exited; CPU time 44750.554544
07:11:12 (843309): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN