Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:43:14 (1437922): wrapper (7.7.26015): starting
04:43:14 (1437922): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 04:43:14] Arguments: --nthreads 8
[2026-03-04 04:43:14] Threads: 8
[2026-03-04 04:43:14] Checking for CVMFS
[2026-03-04 04:43:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 04:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 04:43:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 04:43:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 04:43:17] 2.11.3.0 756893 169520 266660 156880 3 738 34328004 45568001 11711 130560 0 1006104654 99.799 613749592 22738 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-04 04:43:17] CVMFS is ok
[2026-03-04 04:43:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 04:43:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 04:43:17] Further information can be found at the LHC@home message board.
[2026-03-04 04:43:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:43:17] Checking for apptainer binary...
[2026-03-04 04:43:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 04:43:17] Running /usr/bin/apptainer --version
[2026-03-04 04:43:17] apptainer version 1.4.1-1.el9
[2026-03-04 04:43:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:43:18] wns0012.triumf.lcg
[2026-03-04 04:43:18] apptainer works
[2026-03-04 04:43:18] Set ATHENA_PROC_NUMBER=8
[2026-03-04 04:43:18] Set ATHENA_CORE_NUMBER=8
[2026-03-04 04:43:19] Starting ATLAS job with PandaID=7038493576
[2026-03-04 04:43:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:51:00]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . Timing measurements:
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . get job = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . initial setup = 27 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload setup = 49 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-in = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload execution = 121 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-out = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . log creation = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:51:00] 2026-03-04 12:49:54,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038493576/pilotlog.txt
[2026-03-04 04:51:00] 2026-03-04 12:49:54,343 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 04:51:00] - Log from pilotlog.txt -
[2026-03-04 04:51:00] 2026-03-04 12:49:54,157 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038493576/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | INFO     | extracted standard info from prmon json
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | wrong length of table data, x=[1772628370.0, 1772628431.0], y=[1073.0, 497711.0] (must be same and length>=4)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . Timing measurements:
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . get job = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . initial setup = 27 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload setup = 49 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-in = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload execution = 121 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-out = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . log creation = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:51:00] 2026-03-04 12:49:54,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038493576/pilotlog.txt
[2026-03-04 04:51:00] 2026-03-04 12:49:54,343 | WARNING  | 
[2026-03-04 04:51:00] [begin log extracts]
[2026-03-04 04:51:00] - Log from pilotlog.txt -
[2026-03-04 04:51:00] 2026-03-04 12:49:54,157 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038493576/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | INFO     | extracted standard info from prmon json
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:51:00] 2026-03-04 12:49:54,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | WARNING  | wrong length of table data, x=[1772628370.0, 1772628431.0], y=[1073.0, 497711.0] (must be same and length>=4)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,159 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . Timing measurements:
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . get job = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . initial setup = 27 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload setup = 49 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-in = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . payload execution = 121 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . stage-out = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | . log creation = 0 s
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | ..............................
[2026-03-04 04:51:00] 2026-03-04 12:49:54,160 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:51:00] 2026-03-04 12:49:54,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038493576/pilotlog.txt
[2026-03-04 04:51:00] [end log extracts]
[2026-03-04 04:51:00] 2026-03-04 12:49:54,344 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 04:51:00] 2026-03-04 12:49:54,345 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 04:51:00] 2026-03-04 12:49:54,780 | INFO     | time since job start (300s) is within the limit (349056.0s)
[2026-03-04 04:51:00] 2026-03-04 12:49:55,222 | INFO     | 
[2026-03-04 04:51:00] 2026-03-04 12:49:55,223 | INFO     | job summary report
[2026-03-04 04:51:00] 2026-03-04 12:49:55,223 | INFO     | --------------------------------------------------
[2026-03-04 04:51:00] 2026-03-04 12:49:55,223 | INFO     | PanDA job id: 7038493576
[2026-03-04 04:51:00] 2026-03-04 12:49:55,223 | INFO     | task id: 48955010
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 04:47:37,086 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | pilot state: failed 
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | transexitcode: 65
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | exeerrorcode: 65
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | exitcode: 65
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | cpuconsumptiontime: 16 s
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | nevents: 0
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | neventsw: 0
[2026-03-04 04:51:00] 2026-03-04 12:49:55,224 | INFO     | pid: 1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | pgrp: 1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | corecount: 8
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | event service: False
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | sizes: {0: 2285913, 1: 2286511, 2: 2286623, 3: 2287084, 4: 2287084, 175: 2310556, 176: 2314848, 179: 2314904, 297: 2315070}
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | --------------------------------------------------
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | 
[2026-03-04 04:51:00] 2026-03-04 12:49:55,225 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 04:51:00] 2026-03-04 12:49:55,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:51:00] 2026-03-04 12:49:55,586 | INFO     | job 7038493576 has completed (purged errors)
[2026-03-04 04:51:00] 2026-03-04 12:49:55,587 | INFO     | overall cleanup function is called
[2026-03-04 04:51:00] 2026-03-04 12:49:56,158 | INFO     | PID=1441699 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:51:00] 2026-03-04 12:49:56,158 | INFO     | .. there are 19 such processes running
[2026-03-04 04:51:00] 2026-03-04 12:49:56,601 | INFO     | --- collectZombieJob: --- 10, [1446345]
[2026-03-04 04:51:00] 2026-03-04 12:49:56,601 | INFO     | zombie collector waiting for pid 1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:56,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:51:00] 2026-03-04 12:49:56,602 | INFO     | collected zombie processes
[2026-03-04 04:51:00] 2026-03-04 12:49:56,602 | INFO     | will attempt to kill all subprocesses of pid=1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:57,378 | INFO     | process IDs to be killed: [1446345] (in reverse order)
[2026-03-04 04:51:00] 2026-03-04 12:49:57,432 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:51:00] 2026-03-04 12:49:57,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:51:00] 2026-03-04 12:49:57,438 | INFO     | did not find any defunct processes belonging to 1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:57,443 | INFO     | did not find any defunct processes belonging to 1446345
[2026-03-04 04:51:00] 2026-03-04 12:49:57,443 | INFO     | ready for new job
[2026-03-04 04:51:00] 2026-03-04 12:49:57,443 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:51:00] 2026-03-04 12:49:57,445 | INFO     | **************************************
[2026-03-04 04:51:00] 2026-03-04 12:49:57,445 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:51:00] 2026-03-04 12:49:57,445 | INFO     | **************************************
[2026-03-04 04:51:00] 2026-03-04 12:49:57,445 | INFO     | 
[2026-03-04 04:51:00] 2026-03-04 12:49:57,446 | INFO     | architecture information:
[2026-03-04 04:51:00] 2026-03-04 12:49:57,447 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:51:00] 2026-03-04 12:49:57,458 | INFO     | cat /etc/os-release:
[2026-03-04 04:51:00] NAME="CentOS Linux"
[2026-03-04 04:51:00] VERSION="7 (Core)"
[2026-03-04 04:51:00] ID="centos"
[2026-03-04 04:51:00] ID_LIKE="rhel fedora"
[2026-03-04 04:51:00] VERSION_ID="7"
[2026-03-04 04:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:51:00] ANSI_COLOR="0;31"
[2026-03-04 04:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:51:00] HOME_URL="https://www.centos.org/"
[2026-03-04 04:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:51:00] 
[2026-03-04 04:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:51:00] 
[2026-03-04 04:51:00] 2026-03-04 12:49:57,458 | INFO     | **************************************
[2026-03-04 04:51:00] 2026-03-04 12:49:57,962 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 04:51:00] 2026-03-04 12:49:58,089 | INFO     | sufficient remaining disk space (1361734270976 B)
[2026-03-04 04:51:00] 2026-03-04 12:49:58,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:51:00] 2026-03-04 12:49:58,090 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:51:00] 2026-03-04 12:49:58,090 | INFO     | update_server=False
[2026-03-04 04:51:00] 2026-03-04 12:49:58,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:51:00] 2026-03-04 12:49:58,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:51:00] 2026-03-04 12:49:58,333 | INFO     | all data control threads have been joined
[2026-03-04 04:51:00] 2026-03-04 12:49:58,522 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 04:51:00] 2026-03-04 12:49:58,522 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 04:51:00] 2026-03-04 12:49:58,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:51:00] 2026-03-04 12:49:58,522 | INFO     | will abort loop
[2026-03-04 04:51:00] 2026-03-04 12:49:59,012 | INFO     | all job control threads have been joined
[2026-03-04 04:51:00] 2026-03-04 12:49:59,096 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,113 | INFO     | all payload control threads have been joined
[2026-03-04 04:51:00] 2026-03-04 12:49:59,148 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,206 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,339 | INFO     | [data] control thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,527 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,528 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,636 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:49:59,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:51:00] 2026-03-04 12:50:00,017 | INFO     | [job] control thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,098 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,123 | INFO     | [payload] control thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,154 | INFO     | [job] validate thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,298 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,461 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,568 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:00,768 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:51:00] 2026-03-04 12:50:00,944 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:04,776 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:51:00] 2026-03-04 12:50:29,370 | INFO     | PID=1441699 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:51:00] 2026-03-04 12:50:29,371 | INFO     | .. there are 19 such processes running
[2026-03-04 04:51:00] 2026-03-04 12:50:29,371 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:51:00] 2026-03-04 12:50:29,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:51:00] 2026-03-04 12:50:29,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:51:00] 2026-03-04 12:50:53,483 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:51:00] 2026-03-04 12:50:54,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140142283118400)>', '<ExcThread(monitor, started 140141712611072)>']
[2026-03-04 04:51:00] 2026-03-04 12:50:54,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:51:00] 2026-03-04 12:50:54,522 | INFO     | [monitor] control thread has ended
[2026-03-04 04:51:00] 2026-03-04 12:50:59,517 | INFO     | all workflow threads have been joined
[2026-03-04 04:51:00] 2026-03-04 12:50:59,517 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:51:00] 2026-03-04 12:50:59,518 | INFO     | traces error code: 0
[2026-03-04 04:51:00] 2026-03-04 12:50:59,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:51:00] 2026-03-04 12:51:00,550 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:51:00] 2026-03-04 12:51:00,607 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:51:00] 2026-03-04 12:51:00,643 [wrapper] pilotpid: 1441699
[2026-03-04 04:51:00] 2026-03-04 12:51:00,646 [wrapper] Pilot exit status: 0
[2026-03-04 04:51:00] 2026-03-04 12:51:00,667 [wrapper] pandaids: 7038493576
[2026-03-04 04:51:00] 2026-03-04 12:51:00,715 [wrapper] cleanup supervisor_pilot 1441705 1441700
[2026-03-04 04:51:00] 2026-03-04 12:51:00,718 [wrapper] Test setup, not cleaning
[2026-03-04 04:51:00] 2026-03-04 12:51:00,720 [wrapper] apfmon messages muted
[2026-03-04 04:51:00] 2026-03-04 12:51:00,722 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:51:00] 2026-03-04 12:51:00,724 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:51:00]  *** Error codes and diagnostics ***
[2026-03-04 04:51:00]     "exeErrorCode": 65,
[2026-03-04 04:51:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 04:51:00]     "pilotErrorCode": 1305,
[2026-03-04 04:51:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 04:51:00]  *** Listing of results directory ***
[2026-03-04 04:51:00] total 430364
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc    584627 Mar  4 00:44 pilot3.tar.gz
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc      5111 Mar  4 00:45 queuedata.json
[2026-03-04 04:51:00] -rwx------. 1 boinc boinc     36322 Mar  4 00:46 runpilot2-wrapper.sh
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc       100 Mar  4 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:51:00] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 04:43 run_atlas
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc       105 Mar  4 04:43 job.xml
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc      6444 Mar  4 04:43 init_data.xml
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc 436520193 Mar  4 04:43 EVNT.46701403._001021.pool.root.1
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:43 start_atlas.sh
[2026-03-04 04:51:00] drwxrwx--x. 2 boinc boinc      4096 Mar  4 04:43 shared
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc    597938 Mar  4 04:43 input.tar.gz
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc         0 Mar  4 04:43 boinc_lockfile
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc      2556 Mar  4 04:43 pandaJob.out
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc    997352 Mar  4 04:44 agis_schedconf.cvmfs.json
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc   1516092 Mar  4 04:44 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc       441 Mar  4 04:44 workernode_map.json
[2026-03-04 04:51:00] drwx------. 5 boinc boinc      4096 Mar  4 04:44 pilot3
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc       525 Mar  4 04:47 boinc_task_state.xml
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc       981 Mar  4 04:47 memory_monitor_summary.json
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc     23086 Mar  4 04:47 log.48955010._001001.job.log.tgz.1
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc        95 Mar  4 04:49 pilot_heartbeat.json
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc      7049 Mar  4 04:49 heartbeat.json
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc      8192 Mar  4 04:50 boinc_mmap_file
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc        23 Mar  4 04:50 wrapper_checkpoint.txt
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc      5005 Mar  4 04:50 pilotlog.txt
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc     97916 Mar  4 04:51 log.48955010._001001.job.log.1
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc       188 Mar  4 04:51 output.list
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc       620 Mar  4 04:51 runtime_log
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc    143360 Mar  4 04:51 result.tar.gz
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc      8633 Mar  4 04:51 runtime_log.err
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc       643 Mar  4 04:51 B3qKDmF3wH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmprJLDmAnJiJm.diag
[2026-03-04 04:51:00] -rw-r--r--. 1 boinc boinc     21947 Mar  4 04:51 stderr.txt
[2026-03-04 04:51:00] No HITS result produced
[2026-03-04 04:51:00]  *** Contents of shared directory: ***
[2026-03-04 04:51:00] total 427036
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc 436520193 Mar  4 04:43 ATLAS.root_0
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:43 start_atlas.sh
[2026-03-04 04:51:00] -rw-r--r--. 2 boinc boinc    597938 Mar  4 04:43 input.tar.gz
[2026-03-04 04:51:00] -rw-------. 1 boinc boinc    143360 Mar  4 04:51 result.tar.gz
04:51:01 (1437922): run_atlas exited; CPU time 26.532110
04:51:01 (1437922): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN