Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:32:13 (3343356): wrapper (7.7.26015): starting
04:32:13 (3343356): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 04:32:13] Arguments: --nthreads 12
[2026-03-04 04:32:13] Threads: 12
[2026-03-04 04:32:13] Checking for CVMFS
[2026-03-04 04:32:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 04:32:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 04:32:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 04:32:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 04:32:14] 2.11.5.0 3306151 134336 225448 156880 3 473 38501757 45568000 25396 130560 0 795420689 99.816 460005045 21788 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-04 04:32:14] CVMFS is ok
[2026-03-04 04:32:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 04:32:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 04:32:14] Further information can be found at the LHC@home message board.
[2026-03-04 04:32:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:32:14] Checking for apptainer binary...
[2026-03-04 04:32:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 04:32:14] Running /usr/bin/apptainer --version
[2026-03-04 04:32:14] apptainer version 1.4.1-1.el9
[2026-03-04 04:32:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:32:15] wns0041.triumf.lcg
[2026-03-04 04:32:15] apptainer works
[2026-03-04 04:32:15] Set ATHENA_PROC_NUMBER=12
[2026-03-04 04:32:15] Set ATHENA_CORE_NUMBER=12
[2026-03-04 04:32:15] Starting ATLAS job with PandaID=7038145537
[2026-03-04 04:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:37:12]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | found no stored workdir sizes
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | INFO     | will not add max space = 0 B to job metrics
[2026-03-04 04:37:12] 2026-03-04 12:36:26,267 | WARNING  | wrong length of table data, x=[1772627634.0], y=[1397.0] (must be same and length>=4)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . Timing measurements:
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . get job = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . initial setup = 25 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload setup = 23 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-in = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload execution = 48 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-out = 1 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . log creation = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038145537/pilotlog.txt
[2026-03-04 04:37:12] 2026-03-04 12:36:26,370 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 04:37:12] - Log from pilotlog.txt -
[2026-03-04 04:37:12] 2026-03-04 12:36:26,265 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:37:12] 2026-03-04 12:36:26,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | found no stored workdir sizes
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | INFO     | will not add max space = 0 B to job metrics
[2026-03-04 04:37:12] 2026-03-04 12:36:26,267 | WARNING  | wrong length of table data, x=[1772627634.0], y=[1397.0] (must be same and length>=4)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . Timing measurements:
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . get job = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . initial setup = 25 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload setup = 23 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-in = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload execution = 48 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-out = 1 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . log creation = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038145537/pilotlog.txt
[2026-03-04 04:37:12] 2026-03-04 12:36:26,371 | WARNING  | 
[2026-03-04 04:37:12] [begin log extracts]
[2026-03-04 04:37:12] - Log from pilotlog.txt -
[2026-03-04 04:37:12] 2026-03-04 12:36:26,265 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:37:12] 2026-03-04 12:36:26,265 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | WARNING  | found no stored workdir sizes
[2026-03-04 04:37:12] 2026-03-04 12:36:26,266 | INFO     | will not add max space = 0 B to job metrics
[2026-03-04 04:37:12] 2026-03-04 12:36:26,267 | WARNING  | wrong length of table data, x=[1772627634.0], y=[1397.0] (must be same and length>=4)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . Timing measurements:
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . get job = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,273 | INFO     | . initial setup = 25 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload setup = 23 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-in = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . payload execution = 48 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . stage-out = 1 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | . log creation = 0 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | ..............................
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 04:37:12] 2026-03-04 12:36:26,274 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038145537/pilotlog.txt
[2026-03-04 04:37:12] [end log extracts]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,371 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,372 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 04:37:12] 2026-03-04 12:36:26,719 | INFO     | 
[2026-03-04 04:37:12] 2026-03-04 12:36:26,719 | INFO     | job summary report
[2026-03-04 04:37:12] 2026-03-04 12:36:26,719 | INFO     | --------------------------------------------------
[2026-03-04 04:37:12] 2026-03-04 12:36:26,719 | INFO     | PanDA job id: 7038145537
[2026-03-04 04:37:12] 2026-03-04 12:36:26,719 | INFO     | task id: 48844775
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 04:34:14,729 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | pilot state: failed 
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | transexitcode: 65
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | exeerrorcode: 65
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | exitcode: 65
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | cpuconsumptiontime: 22 s
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | nevents: 0
[2026-03-04 04:37:12] 2026-03-04 12:36:26,720 | INFO     | neventsw: 0
[2026-03-04 04:37:12] 2026-03-04 12:36:26,721 | INFO     | pid: 3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:26,721 | INFO     | pgrp: 3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:26,721 | INFO     | corecount: 12
[2026-03-04 04:37:12] 2026-03-04 12:36:26,721 | INFO     | event service: False
[2026-03-04 04:37:12] 2026-03-04 12:36:26,722 | INFO     | sizes: {0: 2286014, 1: 2287129, 2: 2287129, 76: 2310279, 77: 2310283, 79: 2314631, 82: 2314815, 199: 2315009}
[2026-03-04 04:37:12] 2026-03-04 12:36:26,722 | INFO     | --------------------------------------------------
[2026-03-04 04:37:12] 2026-03-04 12:36:26,722 | INFO     | 
[2026-03-04 04:37:12] 2026-03-04 12:36:26,722 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 04:37:12] 2026-03-04 12:36:26,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,930 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,931 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:37:12] 2026-03-04 12:36:26,938 | INFO     | job 7038145537 has completed (purged errors)
[2026-03-04 04:37:12] 2026-03-04 12:36:26,938 | INFO     | overall cleanup function is called
[2026-03-04 04:37:12] 2026-03-04 12:36:27,946 | INFO     | --- collectZombieJob: --- 10, [3351961]
[2026-03-04 04:37:12] 2026-03-04 12:36:27,946 | INFO     | zombie collector waiting for pid 3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:27,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:37:12] 2026-03-04 12:36:27,946 | INFO     | collected zombie processes
[2026-03-04 04:37:12] 2026-03-04 12:36:27,946 | INFO     | will attempt to kill all subprocesses of pid=3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:28,937 | INFO     | process IDs to be killed: [3351961] (in reverse order)
[2026-03-04 04:37:12] 2026-03-04 12:36:29,867 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:37:12] 2026-03-04 12:36:29,871 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:37:12] 2026-03-04 12:36:29,916 | INFO     | did not find any defunct processes belonging to 3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:29,930 | INFO     | did not find any defunct processes belonging to 3351961
[2026-03-04 04:37:12] 2026-03-04 12:36:29,930 | INFO     | ready for new job
[2026-03-04 04:37:12] 2026-03-04 12:36:29,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:37:12] 2026-03-04 12:36:29,932 | INFO     | **************************************
[2026-03-04 04:37:12] 2026-03-04 12:36:29,933 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:37:12] 2026-03-04 12:36:29,933 | INFO     | **************************************
[2026-03-04 04:37:12] 2026-03-04 12:36:29,933 | INFO     | 
[2026-03-04 04:37:12] 2026-03-04 12:36:29,936 | INFO     | architecture information:
[2026-03-04 04:37:12] 2026-03-04 12:36:29,937 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:37:12] 2026-03-04 12:36:30,020 | INFO     | cat /etc/os-release:
[2026-03-04 04:37:12] NAME="CentOS Linux"
[2026-03-04 04:37:12] VERSION="7 (Core)"
[2026-03-04 04:37:12] ID="centos"
[2026-03-04 04:37:12] ID_LIKE="rhel fedora"
[2026-03-04 04:37:12] VERSION_ID="7"
[2026-03-04 04:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:37:12] ANSI_COLOR="0;31"
[2026-03-04 04:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:37:12] HOME_URL="https://www.centos.org/"
[2026-03-04 04:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:37:12] 
[2026-03-04 04:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:37:12] 
[2026-03-04 04:37:12] 2026-03-04 12:36:30,021 | INFO     | **************************************
[2026-03-04 04:37:12] 2026-03-04 12:36:30,526 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 04:37:12] 2026-03-04 12:36:30,560 | INFO     | sufficient remaining disk space (2067767754752 B)
[2026-03-04 04:37:12] 2026-03-04 12:36:30,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:37:12] 2026-03-04 12:36:30,562 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:37:12] 2026-03-04 12:36:30,562 | INFO     | update_server=False
[2026-03-04 04:37:12] 2026-03-04 12:36:30,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:37:12] 2026-03-04 12:36:30,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:37:12] 2026-03-04 12:36:30,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:37:12] 2026-03-04 12:36:30,563 | INFO     | aborting loop
[2026-03-04 04:37:12] 2026-03-04 12:36:31,178 | INFO     | all job control threads have been joined
[2026-03-04 04:37:12] 2026-03-04 12:36:31,458 | INFO     | all data control threads have been joined
[2026-03-04 04:37:12] 2026-03-04 12:36:31,580 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:31,581 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:31,642 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:31,711 | INFO     | all payload control threads have been joined
[2026-03-04 04:37:12] 2026-03-04 12:36:31,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:37:12] 2026-03-04 12:36:32,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,042 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,129 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,196 | INFO     | [job] control thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,342 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,464 | INFO     | [data] control thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,585 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,616 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,717 | INFO     | [payload] control thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,734 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:32,771 | INFO     | [job] validate thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:33,087 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:36:33,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:37:12] 2026-03-04 12:36:37,318 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:37:12] 2026-03-04 12:37:00,649 | INFO     | PID=3347135 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:37:12] 2026-03-04 12:37:00,649 | INFO     | .. there are 42 such processes running
[2026-03-04 04:37:12] 2026-03-04 12:37:00,650 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:37:12] 2026-03-04 12:37:00,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:37:12] 2026-03-04 12:37:00,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:37:12] 2026-03-04 12:37:05,989 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:37:12] 2026-03-04 12:37:06,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194717366080)>', '<ExcThread(monitor, started 140194397263616)>']
[2026-03-04 04:37:12] 2026-03-04 12:37:06,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:37:12] 2026-03-04 12:37:06,686 | INFO     | [monitor] control thread has ended
[2026-03-04 04:37:12] 2026-03-04 12:37:11,195 | INFO     | all workflow threads have been joined
[2026-03-04 04:37:12] 2026-03-04 12:37:11,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:37:12] 2026-03-04 12:37:11,195 | INFO     | traces error code: 0
[2026-03-04 04:37:12] 2026-03-04 12:37:11,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:37:12] 2026-03-04 12:37:11,415 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:37:12] 2026-03-04 12:37:11,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:37:12] 2026-03-04 12:37:11,429 [wrapper] pilotpid: 3347135
[2026-03-04 04:37:12] 2026-03-04 12:37:11,432 [wrapper] Pilot exit status: 0
[2026-03-04 04:37:12] 2026-03-04 12:37:11,559 [wrapper] pandaids: 7038145537
[2026-03-04 04:37:12] 2026-03-04 12:37:11,881 [wrapper] cleanup supervisor_pilot 3347141 3347136
[2026-03-04 04:37:12] 2026-03-04 12:37:11,887 [wrapper] Test setup, not cleaning
[2026-03-04 04:37:12] 2026-03-04 12:37:11,899 [wrapper] apfmon messages muted
[2026-03-04 04:37:12] 2026-03-04 12:37:11,923 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:37:12] 2026-03-04 12:37:11,935 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:37:12]  *** Error codes and diagnostics ***
[2026-03-04 04:37:12]     "exeErrorCode": 65,
[2026-03-04 04:37:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 04:37:12]     "pilotErrorCode": 1305,
[2026-03-04 04:37:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 04:37:12]  *** Listing of results directory ***
[2026-03-04 04:37:12] total 231140
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc    584627 Mar  4 00:44 pilot3.tar.gz
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc      5111 Mar  4 00:45 queuedata.json
[2026-03-04 04:37:12] -rwx------. 1 boinc boinc     36322 Mar  4 00:46 runpilot2-wrapper.sh
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc       100 Mar  4 04:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:37:12] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 04:32 run_atlas
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc       105 Mar  4 04:32 job.xml
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc 232550445 Mar  4 04:32 EVNT.48454184._000002.pool.root.1
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc      6594 Mar  4 04:32 init_data.xml
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:32 start_atlas.sh
[2026-03-04 04:37:12] drwxrwx--x. 2 boinc boinc      4096 Mar  4 04:32 shared
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc    597975 Mar  4 04:32 input.tar.gz
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc         0 Mar  4 04:32 boinc_lockfile
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc      2623 Mar  4 04:32 pandaJob.out
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc    997352 Mar  4 04:32 agis_schedconf.cvmfs.json
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc   1516092 Mar  4 04:32 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc       445 Mar  4 04:33 workernode_map.json
[2026-03-04 04:37:12] drwx------. 5 boinc boinc      4096 Mar  4 04:33 pilot3
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc       524 Mar  4 04:34 boinc_task_state.xml
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc       953 Mar  4 04:34 memory_monitor_summary.json
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc     20719 Mar  4 04:34 log.48844775._000082.job.log.tgz.1
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc      6988 Mar  4 04:36 heartbeat.json
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc        95 Mar  4 04:37 pilot_heartbeat.json
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc      8192 Mar  4 04:37 boinc_mmap_file
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc        23 Mar  4 04:37 wrapper_checkpoint.txt
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc      4819 Mar  4 04:37 pilotlog.txt
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc     84893 Mar  4 04:37 log.48844775._000082.job.log.1
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc       188 Mar  4 04:37 output.list
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc       620 Mar  4 04:37 runtime_log
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc    122880 Mar  4 04:37 result.tar.gz
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc      8635 Mar  4 04:37 runtime_log.err
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc       643 Mar  4 04:37 akRKDm12wH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLtHLDm9mUN5n.diag
[2026-03-04 04:37:12] -rw-r--r--. 1 boinc boinc     21653 Mar  4 04:37 stderr.txt
[2026-03-04 04:37:12] No HITS result produced
[2026-03-04 04:37:12]  *** Contents of shared directory: ***
[2026-03-04 04:37:12] total 227824
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc 232550445 Mar  4 04:32 ATLAS.root_0
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:32 start_atlas.sh
[2026-03-04 04:37:12] -rw-r--r--. 2 boinc boinc    597975 Mar  4 04:32 input.tar.gz
[2026-03-04 04:37:12] -rw-------. 1 boinc boinc    122880 Mar  4 04:37 result.tar.gz
04:37:14 (3343356): run_atlas exited; CPU time 32.465214
04:37:14 (3343356): called boinc_finish(0)

</stderr_txt>
]]>

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