Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:01 (442383): wrapper (7.7.26015): starting
10:06:01 (442383): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 10:06:01] Arguments: --nthreads 4
[2026-03-04 10:06:01] Threads: 4
[2026-03-04 10:06:01] Checking for CVMFS
[2026-03-04 10:06:01] No cvmfs_config command found, will try listing directly
[2026-03-04 10:06:01] CVMFS is ok
[2026-03-04 10:06:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 10:06:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 10:06:01] Further information can be found at the LHC@home message board.
[2026-03-04 10:06:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 10:06:01] Checking for apptainer binary...
[2026-03-04 10:06:01] which: no apptainer in ((null))
[2026-03-04 10:06:01] apptainer is not installed, using version from CVMFS
[2026-03-04 10:06:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 10:06:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-04 10:06:01] apptainer works
[2026-03-04 10:06:01] Set ATHENA_PROC_NUMBER=4
[2026-03-04 10:06:01] Set ATHENA_CORE_NUMBER=4
[2026-03-04 10:06:02] Starting ATLAS job with PandaID=7038490108
[2026-03-04 10:06:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 11:26:15]  *** The last 200 lines of the pilot log: ***
[2026-03-04 11:26:15]  is_altstaged=None
[2026-03-04 11:26:15]  is_tar=False
[2026-03-04 11:26:15]  lfn=log.48955010._000486.job.log.tgz.1
[2026-03-04 11:26:15]  mtime=0
[2026-03-04 11:26:15]  protocol_id=None
[2026-03-04 11:26:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 11:26:15]  replicas=None
[2026-03-04 11:26:15]  scope=mc23_13p6TeV
[2026-03-04 11:26:15]  status=None
[2026-03-04 11:26:15]  status_code=0
[2026-03-04 11:26:15]  storage_token=
[2026-03-04 11:26:15]  surl=/var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/log.48955010._000486.job.log.tgz.1
[2026-03-04 11:26:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/ec/log.48955010._000486.job.log.tgz.1
[2026-03-04 11:26:15]  workdir=None
[2026-03-04 11:26:15] ]
[2026-03-04 11:26:15] 2026-03-04 10:24:53,188 | INFO     | transferring file log.48955010._000486.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/log.48955010._000486.job.log.tgz.1 to /var/lib/
[2026-03-04 11:26:15] 2026-03-04 10:24:53,188 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/log.48955010._000486.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/0/
[2026-03-04 11:26:15] 2026-03-04 10:24:53,204 | INFO     | adding to output.list: log.48955010._000486.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/ec/log.48955010._000486.job.log.tg
[2026-03-04 11:26:15] 2026-03-04 10:24:53,204 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 11:26:15] 2026-03-04 10:24:53,205 | INFO     | summary of transferred files:
[2026-03-04 11:26:15] 2026-03-04 10:24:53,205 | INFO     |  -- lfn=log.48955010._000486.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 11:26:15] 2026-03-04 10:24:53,205 | INFO     | stage-out finished correctly
[2026-03-04 11:26:15] 2026-03-04 10:24:53,372 | WARNING  | process 459952 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 11:26:15] 2026-03-04 10:24:53,372 | INFO     | using path: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 11:26:15] 2026-03-04 10:24:53,715 | INFO     | number of running child processes to parent process 459952: 1
[2026-03-04 11:26:15] 2026-03-04 10:24:53,715 | INFO     | maximum number of monitored processes: 6
[2026-03-04 11:26:15] 2026-03-04 10:24:54,238 | INFO     | time since job start (4719s) is within the limit (349056.0s)
[2026-03-04 11:26:15] 2026-03-04 10:24:54,238 | INFO     | 4724s have passed since pilot start - server update state is 'RUNNING'
[2026-03-04 11:26:15] 2026-03-04 10:24:55,417 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 11:26:15] 2026-03-04 10:24:55,465 | INFO     | job 7038490108 has state=finished
[2026-03-04 11:26:15] 2026-03-04 10:24:55,465 | INFO     | preparing for final server update for job 7038490108 in state='finished'
[2026-03-04 11:26:15] 2026-03-04 10:24:55,465 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/jobReport.json
[2026-03-04 11:26:15] 2026-03-04 10:24:55,467 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/0/workernode_map.json
[2026-03-04 11:26:15] 2026-03-04 10:24:55,467 | INFO     | this job has now completed (state=finished)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,467 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,467 | INFO     | log transfer has been attempted: DONE
[2026-03-04 11:26:15] 2026-03-04 10:24:55,467 | INFO     | job 7038490108 has finished - writing final server update
[2026-03-04 11:26:15] 2026-03-04 10:24:55,468 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18231/.job.ad'
[2026-03-04 11:26:15] 2026-03-04 10:24:55,468 | INFO     | total number of processed events: 400 (read)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | INFO     | using path: /var/lib/boinc/var/slot108/slots/0/PanDA_Pilot-7038490108/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | INFO     | extracted standard info from prmon json
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 11:26:15] 2026-03-04 10:24:55,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | fitting pss+swap vs Time
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | sum of square deviations: 106336877.5
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | sum of deviations: 322024886.5
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | mean x: 1772617606.5
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | mean y: 2323809.0142857144
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | intersect: -5365776110.423956
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | chi2: 0.0001163369798074965
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | current memory leak: 3.03 B/s (using 70 data points, chi2=0.00)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | could have reported an average CPU frequency of 3572 MHz (6 samples)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | ..............................
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | . Timing measurements:
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | . get job = 0 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | . initial setup = 5 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | . payload setup = 5 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,488 | INFO     | . stage-in = 0 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,489 | INFO     | . payload execution = 4696 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,489 | INFO     | . stage-out = 0 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,489 | INFO     | . log creation = 0 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,489 | INFO     | ..............................
[2026-03-04 11:26:15] 2026-03-04 10:24:55,536 | INFO     | 
[2026-03-04 11:26:15] 2026-03-04 10:24:55,536 | INFO     | job summary report
[2026-03-04 11:26:15] 2026-03-04 10:24:55,536 | INFO     | --------------------------------------------------
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | PanDA job id: 7038490108
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | task id: 48955010
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | errors: (none)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | pilot state: finished 
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | transexitcode: 0
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | exeerrorcode: 0
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | exeerrordiag: 
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | exitcode: 0
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | exitmsg: OK
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | cpuconsumptiontime: 18036 s
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | nevents: 400
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | neventsw: 0
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | pid: 459952
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | pgrp: 459952
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | corecount: 4
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | event service: False
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | sizes: {0: 2287074, 11: 2287074, 4704: 2313328, 4706: 2322350, 4708: 2322600}
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | --------------------------------------------------
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | 
[2026-03-04 11:26:15] 2026-03-04 10:24:55,537 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/0
[2026-03-04 11:26:15] 2026-03-04 10:24:55,556 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | job 7038490108 has completed (purged errors)
[2026-03-04 11:26:15] 2026-03-04 10:24:55,557 | INFO     | overall cleanup function is called
[2026-03-04 11:26:15] 2026-03-04 10:24:56,564 | INFO     | --- collectZombieJob: --- 10, [459952]
[2026-03-04 11:26:15] 2026-03-04 10:24:56,564 | INFO     | zombie collector waiting for pid 459952
[2026-03-04 11:26:15] 2026-03-04 10:24:56,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 11:26:15] 2026-03-04 10:24:56,564 | INFO     | collected zombie processes
[2026-03-04 11:26:15] 2026-03-04 10:24:56,564 | INFO     | will attempt to kill all subprocesses of pid=459952
[2026-03-04 11:26:15] 2026-03-04 10:24:57,064 | INFO     | process IDs to be killed: [459952] (in reverse order)
[2026-03-04 11:26:15] 2026-03-04 10:24:57,288 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 11:26:15] 2026-03-04 10:24:57,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 11:26:15] 2026-03-04 10:24:57,324 | INFO     | did not find any defunct processes belonging to 459952
[2026-03-04 11:26:15] 2026-03-04 10:24:57,357 | INFO     | did not find any defunct processes belonging to 459952
[2026-03-04 11:26:15] 2026-03-04 10:24:57,358 | INFO     | ready for new job
[2026-03-04 11:26:15] 2026-03-04 10:24:57,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 11:26:15] 2026-03-04 10:24:57,359 | INFO     | **************************************
[2026-03-04 11:26:15] 2026-03-04 10:24:57,359 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 11:26:15] 2026-03-04 10:24:57,359 | INFO     | **************************************
[2026-03-04 11:26:15] 2026-03-04 10:24:57,359 | INFO     | 
[2026-03-04 11:26:15] 2026-03-04 10:24:57,365 | INFO     | architecture information:
[2026-03-04 11:26:15] 2026-03-04 10:24:57,365 | INFO     | executing command: cat /etc/os-release
[2026-03-04 11:26:15] 2026-03-04 10:24:57,377 | INFO     | cat /etc/os-release:
[2026-03-04 11:26:15] NAME="CentOS Linux"
[2026-03-04 11:26:15] VERSION="7 (Core)"
[2026-03-04 11:26:15] ID="centos"
[2026-03-04 11:26:15] ID_LIKE="rhel fedora"
[2026-03-04 11:26:15] VERSION_ID="7"
[2026-03-04 11:26:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 11:26:15] ANSI_COLOR="0;31"
[2026-03-04 11:26:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 11:26:15] HOME_URL="https://www.centos.org/"
[2026-03-04 11:26:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 11:26:15] 
[2026-03-04 11:26:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 11:26:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 11:26:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 11:26:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 11:26:15] 
[2026-03-04 11:26:15] 2026-03-04 10:24:57,377 | INFO     | **************************************
[2026-03-04 11:26:15] 2026-03-04 10:24:57,880 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/0
[2026-03-04 11:26:15] 2026-03-04 10:24:57,892 | INFO     | sufficient remaining disk space (20367540224 B)
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | INFO     | update_server=False
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 11:26:15] 2026-03-04 10:24:57,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:26:15] 2026-03-04 10:24:57,894 | INFO     | aborting loop
[2026-03-04 11:26:15] 2026-03-04 10:24:58,166 | INFO     | all job control threads have been joined
[2026-03-04 11:26:15] 2026-03-04 10:24:58,475 | INFO     | all payload control threads have been joined
[2026-03-04 11:26:15] 2026-03-04 10:24:58,680 | INFO     | all data control threads have been joined
[2026-03-04 11:26:15] 2026-03-04 10:24:58,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 11:26:15] 2026-03-04 10:24:58,898 | INFO     | [job] retrieve thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:58,898 | INFO     | [job] job monitor thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,163 | INFO     | [payload] validate_post thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,171 | INFO     | [job] control thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,346 | INFO     | [job] validate thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,480 | INFO     | [payload] control thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,572 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,685 | INFO     | [data] control thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,718 | INFO     | [payload] failed_post thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,722 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:24:59,954 | INFO     | [data] copytool_in thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:00,208 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:00,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:26:15] 2026-03-04 10:25:00,767 | INFO     | [data] copytool_out thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:01,551 | INFO     | [job] queue monitor thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:01,899 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:08,465 | INFO     | job.realtimelogging is not enabled
[2026-03-04 11:26:15] 2026-03-04 10:25:09,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 11:26:15] 2026-03-04 10:25:23,119 | INFO     | [monitor] cgroup control has ended
[2026-03-04 11:26:15] 2026-03-04 10:25:24,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22904342308672)>', '<ExcThread(monitor, started 22904105617152)>']
[2026-03-04 11:26:15] 2026-03-04 10:25:27,927 | INFO     | PID=447033 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 11:26:15] 2026-03-04 10:25:27,928 | INFO     | .. there are 39 such processes running
[2026-03-04 11:26:15] 2026-03-04 10:25:27,932 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 11:26:15] 2026-03-04 10:25:27,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 11:26:15] 2026-03-04 10:25:27,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 11:26:15] 2026-03-04 10:25:27,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 11:26:15] 2026-03-04 10:25:27,932 | INFO     | [monitor] control thread has ended
[2026-03-04 11:26:15] 2026-03-04 10:25:29,738 | INFO     | all workflow threads have been joined
[2026-03-04 11:26:15] 2026-03-04 10:25:29,738 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 11:26:15] 2026-03-04 10:25:29,738 | INFO     | traces error code: 0
[2026-03-04 11:26:15] 2026-03-04 10:25:29,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 11:26:15] 2026-03-04 10:25:29,861 [wrapper] ==== pilot stdout END ====
[2026-03-04 11:26:15] 2026-03-04 10:25:29,864 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 11:26:15] 2026-03-04 10:25:29,866 [wrapper] pilotpid: 447033
[2026-03-04 11:26:15] 2026-03-04 10:25:29,868 [wrapper] Pilot exit status: 0
[2026-03-04 11:26:15] 2026-03-04 10:25:29,874 [wrapper] pandaids: 7038490108
[2026-03-04 11:26:15] 2026-03-04 10:25:30,026 [wrapper] cleanup supervisor_pilot 1058696 447034
[2026-03-04 11:26:15] 2026-03-04 10:25:30,029 [wrapper] Test setup, not cleaning
[2026-03-04 11:26:15] 2026-03-04 10:25:30,032 [wrapper] apfmon messages muted
[2026-03-04 11:26:15] 2026-03-04 10:25:30,035 [wrapper] ==== wrapper stdout END ====
[2026-03-04 11:26:15] 2026-03-04 10:25:30,037 [wrapper] ==== wrapper stderr END ====
[2026-03-04 11:26:15]  *** Error codes and diagnostics ***
[2026-03-04 11:26:15]     "exeErrorCode": 0,
[2026-03-04 11:26:15]     "exeErrorDiag": "",
[2026-03-04 11:26:15]     "pilotErrorCode": 0,
[2026-03-04 11:26:15]     "pilotErrorDiag": "",
[2026-03-04 11:26:15]  *** Listing of results directory ***
[2026-03-04 11:26:15] total 613836
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 11:26:15] -rwx------. 1 boinc boinc     36322 Mar  3 14:56 runpilot2-wrapper.sh
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:58 queuedata.json
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc       100 Mar  4 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 11:26:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 10:06 run_atlas
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc       105 Mar  4 10:06 job.xml
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc      6703 Mar  4 10:06 init_data.xml
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc 437592321 Mar  4 10:06 EVNT.46701403._001010.pool.root.1
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc     15845 Mar  4 10:06 start_atlas.sh
[2026-03-04 11:26:15] drwxrwx--x. 2 boinc boinc      4096 Mar  4 10:06 shared
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc    597945 Mar  4 10:06 input.tar.gz
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc         0 Mar  4 10:06 boinc_lockfile
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc      2561 Mar  4 10:06 pandaJob.out
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc    997384 Mar  4 10:06 agis_schedconf.cvmfs.json
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc   1516092 Mar  4 10:06 agis_ddmendpoints.agis.ALL.json
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc       445 Mar  4 10:06 workernode_map.json
[2026-03-04 11:26:15] drwx------. 5 boinc boinc      4096 Mar  4 10:06 pilot3
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc 185069635 Mar  4 11:24 HITS.48955010._000486.pool.root.1
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc       529 Mar  4 11:24 boinc_task_state.xml
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc      1044 Mar  4 11:24 memory_monitor_summary.json
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc    293452 Mar  4 11:24 log.48955010._000486.job.log.tgz.1
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc      6354 Mar  4 11:24 heartbeat.json
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc        95 Mar  4 11:25 pilot_heartbeat.json
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc      4901 Mar  4 11:25 pilotlog.txt
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc    691293 Mar  4 11:25 log.48955010._000486.job.log.1
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc       357 Mar  4 11:25 output.list
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc       620 Mar  4 11:25 runtime_log
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc   1003520 Mar  4 11:25 result.tar.gz
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc      9221 Mar  4 11:25 runtime_log.err
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc       662 Mar  4 11:25 CHXMDmPPfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPlELDmB5EoGm.diag
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc        26 Mar  4 11:25 wrapper_checkpoint.txt
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc      8192 Mar  4 11:26 boinc_mmap_file
[2026-03-04 11:26:15] -rw-r--r--. 1 boinc boinc     21346 Mar  4 11:26 stderr.txt
[2026-03-04 11:26:15] HITS file was successfully produced:
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc 185069635 Mar  4 11:24 shared/HITS.pool.root.1
[2026-03-04 11:26:15]  *** Contents of shared directory: ***
[2026-03-04 11:26:15] total 609664
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc 437592321 Mar  4 10:06 ATLAS.root_0
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc     15845 Mar  4 10:06 start_atlas.sh
[2026-03-04 11:26:15] -rw-r--r--. 2 boinc boinc    597945 Mar  4 10:06 input.tar.gz
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc 185069635 Mar  4 11:24 HITS.pool.root.1
[2026-03-04 11:26:15] -rw-------. 1 boinc boinc   1003520 Mar  4 11:25 result.tar.gz
11:26:16 (442383): run_atlas exited; CPU time 18261.381233
11:26:16 (442383): called boinc_finish(0)

</stderr_txt>
]]>

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