Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:22:53 (2941593): wrapper (7.7.26015): starting
13:22:53 (2941593): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 13:22:53] Arguments: --nthreads 4
[2026-03-06 13:22:53] Threads: 4
[2026-03-06 13:22:53] Checking for CVMFS
[2026-03-06 13:22:53] No cvmfs_config command found, will try listing directly
[2026-03-06 13:22:53] CVMFS is ok
[2026-03-06 13:22:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 13:22:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 13:22:53] Further information can be found at the LHC@home message board.
[2026-03-06 13:22:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 13:22:53] Checking for apptainer binary...
[2026-03-06 13:22:53] which: no apptainer in ((null))
[2026-03-06 13:22:53] apptainer is not installed, using version from CVMFS
[2026-03-06 13:22:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 13:22:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot220/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-06 13:22:53] apptainer works
[2026-03-06 13:22:53] Set ATHENA_PROC_NUMBER=4
[2026-03-06 13:22:53] Set ATHENA_CORE_NUMBER=4
[2026-03-06 13:22:53] Starting ATLAS job with PandaID=7037108467
[2026-03-06 13:22:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot220/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 15:00:21]  *** The last 200 lines of the pilot log: ***
[2026-03-06 15:00:21]  is_altstaged=None
[2026-03-06 15:00:21]  is_tar=False
[2026-03-06 15:00:21]  lfn=log.48838586._004900.job.log.tgz.1
[2026-03-06 15:00:21]  mtime=0
[2026-03-06 15:00:21]  protocol_id=None
[2026-03-06 15:00:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 15:00:21]  replicas=None
[2026-03-06 15:00:21]  scope=mc23_13p6TeV
[2026-03-06 15:00:21]  status=None
[2026-03-06 15:00:21]  status_code=0
[2026-03-06 15:00:21]  storage_token=
[2026-03-06 15:00:21]  surl=/var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/log.48838586._004900.job.log.tgz.1
[2026-03-06 15:00:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/dc/log.48838586._004900.job.log.tgz.1
[2026-03-06 15:00:21]  workdir=None
[2026-03-06 15:00:21] ]
[2026-03-06 15:00:21] 2026-03-06 13:59:22,740 | INFO     | transferring file log.48838586._004900.job.log.tgz.1 from /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/log.48838586._004900.job.log.tgz.1 to /var/lib/
[2026-03-06 15:00:21] 2026-03-06 13:59:22,740 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/log.48838586._004900.job.log.tgz.1 /var/lib/boinc/var/slot220/slots/0/
[2026-03-06 15:00:21] 2026-03-06 13:59:22,756 | INFO     | adding to output.list: log.48838586._004900.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/dc/log.48838586._004900.job.log.tg
[2026-03-06 15:00:21] 2026-03-06 13:59:22,757 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 15:00:21] 2026-03-06 13:59:22,757 | INFO     | summary of transferred files:
[2026-03-06 15:00:21] 2026-03-06 13:59:22,757 | INFO     |  -- lfn=log.48838586._004900.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 15:00:21] 2026-03-06 13:59:22,757 | INFO     | stage-out finished correctly
[2026-03-06 15:00:21] 2026-03-06 13:59:22,783 | INFO     | time since job start (5776s) is within the limit (349056.0s)
[2026-03-06 15:00:21] 2026-03-06 13:59:24,619 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 15:00:21] 2026-03-06 13:59:24,799 | INFO     | time since job start (5778s) is within the limit (349056.0s)
[2026-03-06 15:00:21] 2026-03-06 13:59:26,018 | WARNING  | process 3197498 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 15:00:21] 2026-03-06 13:59:26,018 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 15:00:21] 2026-03-06 13:59:26,466 | INFO     | number of running child processes to parent process 3197498: 1
[2026-03-06 15:00:21] 2026-03-06 13:59:26,466 | INFO     | maximum number of monitored processes: 6
[2026-03-06 15:00:21] 2026-03-06 13:59:26,804 | INFO     | time since job start (5780s) is within the limit (349056.0s)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,446 | INFO     | job 7037108467 has state=finished
[2026-03-06 15:00:21] 2026-03-06 13:59:27,449 | INFO     | preparing for final server update for job 7037108467 in state='finished'
[2026-03-06 15:00:21] 2026-03-06 13:59:27,449 | INFO     | reading metadata from: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/jobReport.json
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot220/slots/0/workernode_map.json
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | INFO     | this job has now completed (state=finished)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | INFO     | log transfer has been attempted: DONE
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | INFO     | job 7037108467 has finished - writing final server update
[2026-03-06 15:00:21] 2026-03-06 13:59:27,451 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391399/.job.ad'
[2026-03-06 15:00:21] 2026-03-06 13:59:27,452 | INFO     | total number of processed events: 400 (read)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,470 | INFO     | using path: /var/lib/boinc/var/slot220/slots/0/PanDA_Pilot-7037108467/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,470 | INFO     | extracted standard info from prmon json
[2026-03-06 15:00:21] 2026-03-06 13:59:27,470 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 15:00:21] 2026-03-06 13:59:27,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 15:00:21] 2026-03-06 13:59:27,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 15:00:21] 2026-03-06 13:59:27,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | fitting pss+swap vs Time
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | sum of square deviations: 211285822.0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | sum of deviations: 365137612.5000001
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | mean x: 1772802770.5
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | mean y: 2344831.4886363638
[2026-03-06 15:00:21] 2026-03-06 13:59:27,472 | INFO     | intersect: -3061357999.7110624
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | chi2: 0.001016930300694354
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | current memory leak: 1.73 B/s (using 88 data points, chi2=0.00)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | could have reported an average CPU frequency of 3763 MHz (7 samples)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | ..............................
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . Timing measurements:
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . get job = 0 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . initial setup = 4 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . payload setup = 5 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . stage-in = 0 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . payload execution = 5755 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . stage-out = 0 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | . log creation = 0 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,473 | INFO     | ..............................
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | 
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | job summary report
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | --------------------------------------------------
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | PanDA job id: 7037108467
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | task id: 48838586
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | errors: (none)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | pilot state: finished 
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | transexitcode: 0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | exeerrorcode: 0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | exeerrordiag: 
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | exitcode: 0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | exitmsg: OK
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | cpuconsumptiontime: 22092 s
[2026-03-06 15:00:21] 2026-03-06 13:59:27,526 | INFO     | nevents: 400
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | neventsw: 0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | pid: 3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | pgrp: 3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | corecount: 4
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | event service: False
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | sizes: {0: 2295770, 11: 2295770, 5764: 2322472, 5765: 2322471, 5766: 2331549, 5767: 2331605, 5770: 2331927}
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | --------------------------------------------------
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | 
[2026-03-06 15:00:21] 2026-03-06 13:59:27,527 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot220/slots/0
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,545 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 15:00:21] 2026-03-06 13:59:27,545 | INFO     | job 7037108467 has completed (purged errors)
[2026-03-06 15:00:21] 2026-03-06 13:59:27,545 | INFO     | overall cleanup function is called
[2026-03-06 15:00:21] 2026-03-06 13:59:28,549 | INFO     | --- collectZombieJob: --- 10, [3197498]
[2026-03-06 15:00:21] 2026-03-06 13:59:28,549 | INFO     | zombie collector waiting for pid 3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:28,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 15:00:21] 2026-03-06 13:59:28,549 | INFO     | collected zombie processes
[2026-03-06 15:00:21] 2026-03-06 13:59:28,549 | INFO     | will attempt to kill all subprocesses of pid=3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:29,041 | INFO     | process IDs to be killed: [3197498] (in reverse order)
[2026-03-06 15:00:21] 2026-03-06 13:59:29,246 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 15:00:21] 2026-03-06 13:59:29,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 15:00:21] 2026-03-06 13:59:29,275 | INFO     | did not find any defunct processes belonging to 3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:29,304 | INFO     | did not find any defunct processes belonging to 3197498
[2026-03-06 15:00:21] 2026-03-06 13:59:29,304 | INFO     | ready for new job
[2026-03-06 15:00:21] 2026-03-06 13:59:29,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 15:00:21] 2026-03-06 13:59:29,306 | INFO     | **************************************
[2026-03-06 15:00:21] 2026-03-06 13:59:29,306 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 15:00:21] 2026-03-06 13:59:29,306 | INFO     | **************************************
[2026-03-06 15:00:21] 2026-03-06 13:59:29,306 | INFO     | 
[2026-03-06 15:00:21] 2026-03-06 13:59:29,311 | INFO     | architecture information:
[2026-03-06 15:00:21] 2026-03-06 13:59:29,312 | INFO     | executing command: cat /etc/os-release
[2026-03-06 15:00:21] 2026-03-06 13:59:29,326 | INFO     | cat /etc/os-release:
[2026-03-06 15:00:21] NAME="CentOS Linux"
[2026-03-06 15:00:21] VERSION="7 (Core)"
[2026-03-06 15:00:21] ID="centos"
[2026-03-06 15:00:21] ID_LIKE="rhel fedora"
[2026-03-06 15:00:21] VERSION_ID="7"
[2026-03-06 15:00:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 15:00:21] ANSI_COLOR="0;31"
[2026-03-06 15:00:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 15:00:21] HOME_URL="https://www.centos.org/"
[2026-03-06 15:00:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 15:00:21] 
[2026-03-06 15:00:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 15:00:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 15:00:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 15:00:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 15:00:21] 
[2026-03-06 15:00:21] 2026-03-06 13:59:29,326 | INFO     | **************************************
[2026-03-06 15:00:21] 2026-03-06 13:59:29,829 | INFO     | executing command: df -mP /var/lib/boinc/var/slot220/slots/0
[2026-03-06 15:00:21] 2026-03-06 13:59:29,843 | INFO     | sufficient remaining disk space (29404168192 B)
[2026-03-06 15:00:21] 2026-03-06 13:59:29,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 15:00:21] 2026-03-06 13:59:29,843 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 15:00:21] 2026-03-06 13:59:29,843 | INFO     | update_server=False
[2026-03-06 15:00:21] 2026-03-06 13:59:29,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 15:00:21] 2026-03-06 13:59:29,899 | INFO     | all data control threads have been joined
[2026-03-06 15:00:21] 2026-03-06 13:59:29,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 15:00:21] 2026-03-06 13:59:29,974 | INFO     | aborting loop
[2026-03-06 15:00:21] 2026-03-06 13:59:30,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 15:00:21] 2026-03-06 13:59:30,694 | INFO     | all job control threads have been joined
[2026-03-06 15:00:21] 2026-03-06 13:59:30,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 15:00:21] 2026-03-06 13:59:30,845 | INFO     | [job] retrieve thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:30,905 | INFO     | [data] control thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:30,979 | INFO     | [job] job monitor thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,008 | INFO     | all payload control threads have been joined
[2026-03-06 15:00:21] 2026-03-06 13:59:31,022 | INFO     | [job] validate thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,065 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,243 | INFO     | [payload] validate_post thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,338 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,561 | INFO     | [data] copytool_in thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,700 | INFO     | [job] control thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:31,778 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:32,014 | INFO     | [payload] control thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:32,260 | INFO     | [payload] failed_post thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:32,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:32,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 15:00:21] 2026-03-06 13:59:32,824 | INFO     | [data] copytool_out thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:33,542 | INFO     | [job] queue monitor thread has finished
[2026-03-06 15:00:21] 2026-03-06 13:59:34,678 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 15:00:21] 2026-03-06 14:00:00,440 | INFO     | PID=3031648 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 15:00:21] 2026-03-06 14:00:00,440 | INFO     | .. there are 47 such processes running
[2026-03-06 15:00:21] 2026-03-06 14:00:00,441 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 15:00:21] 2026-03-06 14:00:00,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 15:00:21] 2026-03-06 14:00:00,441 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 15:00:21] 2026-03-06 14:00:15,122 | INFO     | [monitor] cgroup control has ended
[2026-03-06 15:00:21] 2026-03-06 14:00:16,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22647257061184)>', '<ExcThread(monitor, started 22646947288832)>']
[2026-03-06 15:00:21] 2026-03-06 14:00:16,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 15:00:21] 2026-03-06 14:00:16,521 | INFO     | [monitor] control thread has ended
[2026-03-06 15:00:21] 2026-03-06 14:00:21,078 | INFO     | all workflow threads have been joined
[2026-03-06 15:00:21] 2026-03-06 14:00:21,079 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 15:00:21] 2026-03-06 14:00:21,079 | INFO     | traces error code: 0
[2026-03-06 15:00:21] 2026-03-06 14:00:21,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 15:00:21] 2026-03-06 14:00:21,282 [wrapper] ==== pilot stdout END ====
[2026-03-06 15:00:21] 2026-03-06 14:00:21,284 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 15:00:21] 2026-03-06 14:00:21,286 [wrapper] pilotpid: 3031648
[2026-03-06 15:00:21] 2026-03-06 14:00:21,288 [wrapper] Pilot exit status: 0
[2026-03-06 15:00:21] 2026-03-06 14:00:21,294 [wrapper] pandaids: 7037108467
[2026-03-06 15:00:21] 2026-03-06 14:00:21,418 [wrapper] cleanup supervisor_pilot 4013460 3031651
[2026-03-06 15:00:21] 2026-03-06 14:00:21,420 [wrapper] Test setup, not cleaning
[2026-03-06 15:00:21] 2026-03-06 14:00:21,422 [wrapper] apfmon messages muted
[2026-03-06 15:00:21] 2026-03-06 14:00:21,424 [wrapper] ==== wrapper stdout END ====
[2026-03-06 15:00:21] 2026-03-06 14:00:21,426 [wrapper] ==== wrapper stderr END ====
[2026-03-06 15:00:21]  *** Error codes and diagnostics ***
[2026-03-06 15:00:21]     "exeErrorCode": 0,
[2026-03-06 15:00:21]     "exeErrorDiag": "",
[2026-03-06 15:00:21]     "pilotErrorCode": 0,
[2026-03-06 15:00:21]     "pilotErrorDiag": "",
[2026-03-06 15:00:21]  *** Listing of results directory ***
[2026-03-06 15:00:21] total 482248
[2026-03-06 15:00:21] -rwx------. 1 boinc boinc     36322 Mar  4 03:47 runpilot2-wrapper.sh
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc      5111 Mar  4 03:48 queuedata.json
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc    584627 Mar  4 03:48 pilot3.tar.gz
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc       100 Mar  6 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 15:00:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 13:22 run_atlas
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc       105 Mar  6 13:22 job.xml
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc      6708 Mar  6 13:22 init_data.xml
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc 276399310 Mar  6 13:22 EVNT.48220221._000198.pool.root.1
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc     15845 Mar  6 13:22 start_atlas.sh
[2026-03-06 15:00:21] drwxrwx--x. 2 boinc boinc      4096 Mar  6 13:22 shared
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc    597958 Mar  6 13:22 input.tar.gz
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc         0 Mar  6 13:22 boinc_lockfile
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc      2561 Mar  6 13:22 pandaJob.out
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc    998899 Mar  6 13:23 agis_schedconf.cvmfs.json
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc   1521291 Mar  6 13:23 agis_ddmendpoints.agis.ALL.json
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc       444 Mar  6 13:23 workernode_map.json
[2026-03-06 15:00:21] drwx------. 5 boinc boinc      4096 Mar  6 13:23 pilot3
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc 211268482 Mar  6 14:58 HITS.48838586._004900.pool.root.1
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc       529 Mar  6 14:58 boinc_task_state.xml
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc      1032 Mar  6 14:59 memory_monitor_summary.json
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc    269833 Mar  6 14:59 log.48838586._004900.job.log.tgz.1
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc      6351 Mar  6 14:59 heartbeat.json
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc      8192 Mar  6 14:59 boinc_mmap_file
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc        27 Mar  6 14:59 wrapper_checkpoint.txt
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc        95 Mar  6 15:00 pilot_heartbeat.json
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc      4830 Mar  6 15:00 pilotlog.txt
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc    835853 Mar  6 15:00 log.48838586._004900.job.log.1
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc       357 Mar  6 15:00 output.list
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc       620 Mar  6 15:00 runtime_log
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc   1126400 Mar  6 15:00 result.tar.gz
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc      9221 Mar  6 15:00 runtime_log.err
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc       662 Mar  6 15:00 pIELDmCSrH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmhCJLDmx90B6n.diag
[2026-03-06 15:00:21] -rw-r--r--. 1 boinc boinc     21413 Mar  6 15:00 stderr.txt
[2026-03-06 15:00:21] HITS file was successfully produced:
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc 211268482 Mar  6 14:58 shared/HITS.pool.root.1
[2026-03-06 15:00:21]  *** Contents of shared directory: ***
[2026-03-06 15:00:21] total 477952
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc 276399310 Mar  6 13:22 ATLAS.root_0
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc     15845 Mar  6 13:22 start_atlas.sh
[2026-03-06 15:00:21] -rw-r--r--. 2 boinc boinc    597958 Mar  6 13:22 input.tar.gz
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc 211268482 Mar  6 14:58 HITS.pool.root.1
[2026-03-06 15:00:21] -rw-------. 1 boinc boinc   1126400 Mar  6 15:00 result.tar.gz
15:00:22 (2941593): run_atlas exited; CPU time 22349.001703
15:00:22 (2941593): called boinc_finish(0)

</stderr_txt>
]]>

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