Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:19:13 (32548): wrapper (7.7.26015): starting
23:19:13 (32548): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 23:19:13] Arguments: --nthreads 8
[2026-03-04 23:19:13] Threads: 8
[2026-03-04 23:19:13] Checking for CVMFS
[2026-03-04 23:19:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 23:19:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 23:19:19] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 23:19:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 23:19:21] 2.11.2.0 3310 10954 82992 156893 1 53 17723873 25165825 96 130560 152 2298312 99.968 391842 19 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-04 23:19:21] CVMFS is ok
[2026-03-04 23:19:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 23:19:21] Checking for apptainer binary...
[2026-03-04 23:19:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 23:19:21] Running /usr/bin/apptainer --version
[2026-03-04 23:19:21] apptainer version 1.3.2-1.el7
[2026-03-04 23:19:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 23:19:26] cg-vwn451.simple-grid.lan
[2026-03-04 23:19:26] apptainer works
[2026-03-04 23:19:26] Set ATHENA_PROC_NUMBER=8
[2026-03-04 23:19:26] Set ATHENA_CORE_NUMBER=8
[2026-03-04 23:19:26] Starting ATLAS job with PandaID=7037672969
[2026-03-04 23:19:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 02:22:29]  *** The last 200 lines of the pilot log: ***
[2026-03-05 02:22:29] 2026-03-05 01:21:46,253 | INFO     | sum of square deviations: 1342841922.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,254 | INFO     | sum of deviations: 85023328232.99998
[2026-03-05 02:22:29] 2026-03-05 01:21:46,254 | INFO     | mean x: 1772668411.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,254 | INFO     | mean y: 2382532.8343558284
[2026-03-05 02:22:29] 2026-03-05 01:21:46,255 | INFO     | intersect: -112235823385.13931
[2026-03-05 02:22:29] 2026-03-05 01:21:46,255 | INFO     | chi2: 8.590696506212021
[2026-03-05 02:22:29] 2026-03-05 01:21:46,255 | INFO     | current chi2=8.590696506212021 (change=-0.3674745515973387 %)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,255 | INFO     | right removable region: 162
[2026-03-05 02:22:29] 2026-03-05 01:21:46,256 | INFO     | sum of square deviations: 1342841922.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,257 | INFO     | sum of deviations: 30047720867.999992
[2026-03-05 02:22:29] 2026-03-05 01:21:46,257 | INFO     | mean x: 1772668716.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,257 | INFO     | mean y: 2454786.030674847
[2026-03-05 02:22:29] 2026-03-05 01:21:46,257 | INFO     | intersect: -39663163256.689285
[2026-03-05 02:22:29] 2026-03-05 01:21:46,257 | INFO     | chi2: 3.061363142588526
[2026-03-05 02:22:29] 2026-03-05 01:21:46,258 | INFO     | current chi2=3.061363142588526 (change=64.2332508097838 %)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,258 | INFO     | sum of square deviations: 1223016419.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,259 | INFO     | sum of deviations: -13159237840.499998
[2026-03-05 02:22:29] 2026-03-05 01:21:46,259 | INFO     | mean x: 1772668868.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,259 | INFO     | mean y: 2509673.0316455695
[2026-03-05 02:22:29] 2026-03-05 01:21:46,259 | INFO     | intersect: 19075819631.19081
[2026-03-05 02:22:29] 2026-03-05 01:21:46,260 | INFO     | chi2: 0.2617789805552426
[2026-03-05 02:22:29] 2026-03-05 01:21:46,260 | INFO     | current chi2=0.2617789805552426 (change=91.44894060709517 %)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,260 | INFO     | sum of square deviations: 1110539892.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,261 | INFO     | sum of deviations: -20004354395.999996
[2026-03-05 02:22:29] 2026-03-05 01:21:46,262 | INFO     | mean x: 1772669021.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,262 | INFO     | mean y: 2518857.732026144
[2026-03-05 02:22:29] 2026-03-05 01:21:46,262 | INFO     | intersect: 31933924094.361164
[2026-03-05 02:22:29] 2026-03-05 01:21:46,262 | INFO     | chi2: 0.14055308221844146
[2026-03-05 02:22:29] 2026-03-05 01:21:46,262 | INFO     | current chi2=0.14055308221844146 (change=46.30849202624163 %)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,263 | INFO     | sum of square deviations: 1005179777.0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,263 | INFO     | sum of deviations: -15521394215.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | mean x: 1772669173.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | mean y: 2512358.5337837837
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | intersect: 27375025898.02779
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | chi2: 0.13059097196428698
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | current chi2=0.13059097196428698 (change=7.087792097416829 %)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,264 | INFO     | left removable region: 40
[2026-03-05 02:22:29] 2026-03-05 01:21:46,265 | INFO     | sum of square deviations: 563026370.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,265 | INFO     | sum of deviations: 2183885247.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,265 | INFO     | mean x: 1772669600.5
[2026-03-05 02:22:29] 2026-03-05 01:21:46,266 | INFO     | mean y: 2481533.3032786883
[2026-03-05 02:22:29] 2026-03-05 01:21:46,266 | INFO     | intersect: -6873407753.7042265
[2026-03-05 02:22:29] 2026-03-05 01:21:46,266 | INFO     | chi2: 0.00016914827312309802
[2026-03-05 02:22:29] 2026-03-05 01:21:46,266 | INFO     | current memory leak: 3.88 B/s (using 122 data points, chi2=0.00)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | ..............................
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . Timing measurements:
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . get job = 0 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . initial setup = 121 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . payload setup = 152 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . stage-in = 0 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . payload execution = 10367 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . stage-out = 0 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,267 | INFO     | . log creation = 0 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,268 | INFO     | ..............................
[2026-03-05 02:22:29] 2026-03-05 01:21:46,486 | INFO     | time since job start (10541s) is within the limit (349056.0s)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,492 | WARNING  | process 8608 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 02:22:29] 2026-03-05 01:21:46,492 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7037672969/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,555 | INFO     | number of running child processes to parent process 8608: 1
[2026-03-05 02:22:29] 2026-03-05 01:21:46,555 | INFO     | maximum number of monitored processes: 10
[2026-03-05 02:22:29] 2026-03-05 01:21:46,555 | INFO     | aborting job monitoring since job object (job id=7037672969) has expired
[2026-03-05 02:22:29] 2026-03-05 01:21:46,875 | INFO     | 
[2026-03-05 02:22:29] 2026-03-05 01:21:46,875 | INFO     | job summary report
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | --------------------------------------------------
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | PanDA job id: 7037672969
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | task id: 48700874
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | errors: (none)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | pilot state: finished 
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | transexitcode: 0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | exeerrorcode: 0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | exeerrordiag: 
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | exitcode: 0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | exitmsg: OK
[2026-03-05 02:22:29] 2026-03-05 01:21:46,876 | INFO     | cpuconsumptiontime: 45152 s
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | nevents: 400
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | neventsw: 0
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | pid: 8608
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | pgrp: 8608
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | corecount: 8
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | event service: False
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | sizes: {0: 2294691, 1: 2295750, 2: 2295810, 12: 2295838, 10524: 2324654, 10525: 2333654, 10526: 2333838, 10528: 2334096}
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | --------------------------------------------------
[2026-03-05 02:22:29] 2026-03-05 01:21:46,877 | INFO     | 
[2026-03-05 02:22:29] 2026-03-05 01:21:46,878 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-03-05 02:22:29] 2026-03-05 01:21:46,908 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,911 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,911 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 02:22:29] 2026-03-05 01:21:46,911 | INFO     | job 7037672969 has completed (purged errors)
[2026-03-05 02:22:29] 2026-03-05 01:21:46,911 | INFO     | overall cleanup function is called
[2026-03-05 02:22:29] 2026-03-05 01:21:47,920 | INFO     | --- collectZombieJob: --- 10, [8608]
[2026-03-05 02:22:29] 2026-03-05 01:21:47,920 | INFO     | zombie collector waiting for pid 8608
[2026-03-05 02:22:29] 2026-03-05 01:21:47,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 02:22:29] 2026-03-05 01:21:47,920 | INFO     | collected zombie processes
[2026-03-05 02:22:29] 2026-03-05 01:21:47,921 | INFO     | will attempt to kill all subprocesses of pid=8608
[2026-03-05 02:22:29] 2026-03-05 01:21:47,984 | INFO     | process IDs to be killed: [8608] (in reverse order)
[2026-03-05 02:22:29] 2026-03-05 01:21:48,033 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 02:22:29] 2026-03-05 01:21:48,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 02:22:29] 2026-03-05 01:21:48,035 | INFO     | did not find any defunct processes belonging to 8608
[2026-03-05 02:22:29] 2026-03-05 01:21:48,037 | INFO     | did not find any defunct processes belonging to 8608
[2026-03-05 02:22:29] 2026-03-05 01:21:48,037 | INFO     | ready for new job
[2026-03-05 02:22:29] 2026-03-05 01:21:48,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 02:22:29] 2026-03-05 01:21:48,039 | INFO     | **************************************
[2026-03-05 02:22:29] 2026-03-05 01:21:48,039 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 02:22:29] 2026-03-05 01:21:48,039 | INFO     | **************************************
[2026-03-05 02:22:29] 2026-03-05 01:21:48,039 | INFO     | 
[2026-03-05 02:22:29] 2026-03-05 01:21:48,040 | INFO     | pilot is running in a VM
[2026-03-05 02:22:29] 2026-03-05 01:21:48,040 | INFO     | architecture information:
[2026-03-05 02:22:29] 2026-03-05 01:21:48,041 | INFO     | executing command: cat /etc/os-release
[2026-03-05 02:22:29] 2026-03-05 01:21:48,059 | INFO     | cat /etc/os-release:
[2026-03-05 02:22:29] NAME="CentOS Linux"
[2026-03-05 02:22:29] VERSION="7 (Core)"
[2026-03-05 02:22:29] ID="centos"
[2026-03-05 02:22:29] ID_LIKE="rhel fedora"
[2026-03-05 02:22:29] VERSION_ID="7"
[2026-03-05 02:22:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 02:22:29] ANSI_COLOR="0;31"
[2026-03-05 02:22:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 02:22:29] HOME_URL="https://www.centos.org/"
[2026-03-05 02:22:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 02:22:29] 
[2026-03-05 02:22:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 02:22:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 02:22:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 02:22:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 02:22:29] 
[2026-03-05 02:22:29] 2026-03-05 01:21:48,060 | INFO     | **************************************
[2026-03-05 02:22:29] 2026-03-05 01:21:48,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-03-05 02:22:29] 2026-03-05 01:21:48,584 | INFO     | sufficient remaining disk space (497894293504 B)
[2026-03-05 02:22:29] 2026-03-05 01:21:48,585 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 02:22:29] 2026-03-05 01:21:48,585 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 02:22:29] 2026-03-05 01:21:48,585 | INFO     | update_server=False
[2026-03-05 02:22:29] 2026-03-05 01:21:48,585 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 02:22:29] 2026-03-05 01:21:48,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 02:22:29] 2026-03-05 01:21:49,058 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 02:22:29] 2026-03-05 01:21:49,058 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 02:22:29] 2026-03-05 01:21:49,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 02:22:29] 2026-03-05 01:21:49,059 | INFO     | will abort loop
[2026-03-05 02:22:29] 2026-03-05 01:21:49,225 | INFO     | all data control threads have been joined
[2026-03-05 02:22:29] 2026-03-05 01:21:49,591 | INFO     | [job] retrieve thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:49,643 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:49,700 | INFO     | [data] copytool_in thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:49,767 | INFO     | [payload] failed_post thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:49,929 | INFO     | all payload control threads have been joined
[2026-03-05 02:22:29] 2026-03-05 01:21:50,064 | INFO     | [job] job monitor thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,069 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,200 | INFO     | all job control threads have been joined
[2026-03-05 02:22:29] 2026-03-05 01:21:50,231 | INFO     | [data] control thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,402 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 02:22:29] 2026-03-05 01:21:50,519 | INFO     | [job] validate thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,592 | INFO     | [data] copytool_out thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,816 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,820 | INFO     | [payload] validate_post thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:50,934 | INFO     | [payload] control thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:51,204 | INFO     | [job] control thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:51,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 02:22:29] 2026-03-05 01:21:52,397 | INFO     | [job] queue monitor thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:54,408 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:21:59,006 | INFO     | job.realtimelogging is not enabled
[2026-03-05 02:22:29] 2026-03-05 01:22:00,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 02:22:29] 2026-03-05 01:22:19,579 | INFO     | PID=4170 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-05 02:22:29] 2026-03-05 01:22:19,579 | INFO     | .. there are 2 such processes running
[2026-03-05 02:22:29] 2026-03-05 01:22:19,579 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 02:22:29] 2026-03-05 01:22:19,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 02:22:29] 2026-03-05 01:22:19,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 02:22:29] 2026-03-05 01:22:22,857 | INFO     | [monitor] cgroup control has ended
[2026-03-05 02:22:29] 2026-03-05 01:22:23,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137621808960)>', '<ExcThread(monitor, started 140137182779136)>']
[2026-03-05 02:22:29] 2026-03-05 01:22:24,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 02:22:29] 2026-03-05 01:22:24,601 | INFO     | [monitor] control thread has ended
[2026-03-05 02:22:29] 2026-03-05 01:22:28,886 | INFO     | all workflow threads have been joined
[2026-03-05 02:22:29] 2026-03-05 01:22:28,886 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 02:22:29] 2026-03-05 01:22:28,886 | INFO     | traces error code: 0
[2026-03-05 02:22:29] 2026-03-05 01:22:28,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 02:22:29] 2026-03-05 01:22:29,043 [wrapper] ==== pilot stdout END ====
[2026-03-05 02:22:29] 2026-03-05 01:22:29,050 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 02:22:29] 2026-03-05 01:22:29,058 [wrapper] pilotpid: 4170
[2026-03-05 02:22:29] 2026-03-05 01:22:29,065 [wrapper] Pilot exit status: 0
[2026-03-05 02:22:29] 2026-03-05 01:22:29,093 [wrapper] pandaids: 7037672969
[2026-03-05 02:22:29] 2026-03-05 01:22:29,142 [wrapper] cleanup supervisor_pilot 29657 4171
[2026-03-05 02:22:29] 2026-03-05 01:22:29,150 [wrapper] Test setup, not cleaning
[2026-03-05 02:22:29] 2026-03-05 01:22:29,154 [wrapper] apfmon messages muted
[2026-03-05 02:22:29] 2026-03-05 01:22:29,158 [wrapper] ==== wrapper stdout END ====
[2026-03-05 02:22:29] 2026-03-05 01:22:29,161 [wrapper] ==== wrapper stderr END ====
[2026-03-05 02:22:29]  *** Error codes and diagnostics ***
[2026-03-05 02:22:29]     "exeErrorCode": 0,
[2026-03-05 02:22:29]     "exeErrorDiag": "",
[2026-03-05 02:22:29]     "pilotErrorCode": 0,
[2026-03-05 02:22:29]     "pilotErrorDiag": "",
[2026-03-05 02:22:29]  *** Listing of results directory ***
[2026-03-05 02:22:29] total 342124
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc      5111 Mar  4 08:36 queuedata.json
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc    584627 Mar  4 08:36 pilot3.tar.gz
[2026-03-05 02:22:29] -rwx------. 1 boinc boinc     36322 Mar  4 08:37 runpilot2-wrapper.sh
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc       100 Mar  4 23:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 02:22:29] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 23:19 run_atlas
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc       105 Mar  4 23:19 job.xml
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc 189010100 Mar  4 23:19 EVNT.48700872._000070.pool.root.1
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc     15845 Mar  4 23:19 start_atlas.sh
[2026-03-05 02:22:29] drwxrwx--x. 2 boinc boinc        68 Mar  4 23:19 shared
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc    597957 Mar  4 23:19 input.tar.gz
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc      6392 Mar  4 23:19 init_data.xml
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc         0 Mar  4 23:19 boinc_lockfile
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc      2550 Mar  4 23:19 pandaJob.out
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc   1521291 Mar  4 23:24 agis_ddmendpoints.agis.ALL.json
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc       415 Mar  4 23:26 workernode_map.json
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc    997757 Mar  4 23:26 agis_schedconf.cvmfs.json
[2026-03-05 02:22:29] drwx------. 5 boinc boinc      4096 Mar  4 23:26 pilot3
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc 153585008 Mar  5 02:21 HITS.48700874._001805.pool.root.1
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc        95 Mar  5 02:21 pilot_heartbeat.json
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc       531 Mar  5 02:21 boinc_task_state.xml
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc      1018 Mar  5 02:21 memory_monitor_summary.json
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc    412891 Mar  5 02:21 log.48700874._001805.job.log.tgz.1
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc      6317 Mar  5 02:21 heartbeat.json
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc      8192 Mar  5 02:22 boinc_mmap_file
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc        28 Mar  5 02:22 wrapper_checkpoint.txt
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc      5138 Mar  5 02:22 pilotlog.txt
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc   1495136 Mar  5 02:22 log.48700874._001805.job.log.1
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc       357 Mar  5 02:22 output.list
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc       620 Mar  5 02:22 runtime_log
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc   1925120 Mar  5 02:22 result.tar.gz
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc      8832 Mar  5 02:22 runtime_log.err
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc       654 Mar  5 02:22 DZPODm8xvH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLeJLDmEckDLn.diag
[2026-03-05 02:22:29] -rw-r--r--. 1 boinc boinc     20841 Mar  5 02:22 stderr.txt
[2026-03-05 02:22:29] HITS file was successfully produced:
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc 153585008 Mar  5 02:21 shared/HITS.pool.root.1
[2026-03-05 02:22:29]  *** Contents of shared directory: ***
[2026-03-05 02:22:29] total 337052
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc 189010100 Mar  4 23:19 ATLAS.root_0
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc     15845 Mar  4 23:19 start_atlas.sh
[2026-03-05 02:22:29] -rw-r--r--. 2 boinc boinc    597957 Mar  4 23:19 input.tar.gz
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc 153585008 Mar  5 02:21 HITS.pool.root.1
[2026-03-05 02:22:29] -rw-------. 1 boinc boinc   1925120 Mar  5 02:22 result.tar.gz
02:22:30 (32548): run_atlas exited; CPU time 45263.400855
02:22:30 (32548): called boinc_finish(0)

</stderr_txt>
]]>

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