Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-04 02:26:40 (39040): vboxwrapper version 26210
2026-03-04 02:26:40 (39040): BOINC client version: 8.0.2
2026-03-04 02:26:43 (39040): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-04 02:26:43 (39040): Successfully copied 'init_data.xml' to the shared directory.
2026-03-04 02:26:44 (39040): Create VM. (boinc_a29241c462ca79a8, slot#2)
2026-03-04 02:26:46 (39040): Setting Memory Size for VM. (4800MB)
2026-03-04 02:26:47 (39040): Setting CPU Count for VM. (8)
2026-03-04 02:26:47 (39040): Setting Chipset Options for VM.
2026-03-04 02:26:48 (39040): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-04 02:26:49 (39040): Setting Boot Options for VM.
2026-03-04 02:26:50 (39040): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-04 02:26:50 (39040): Enabling VM Network Access.
2026-03-04 02:26:51 (39040): Disabling USB Support for VM.
2026-03-04 02:26:52 (39040): Disabling COM Port Support for VM.
2026-03-04 02:26:53 (39040): Disabling LPT Port Support for VM.
2026-03-04 02:26:53 (39040): Disabling Audio Support for VM.
2026-03-04 02:26:53 (39040): Disabling Clipboard Support for VM.
2026-03-04 02:26:54 (39040): Disabling Drag and Drop Support for VM.
2026-03-04 02:26:55 (39040): Adding storage controller(s) to VM.
2026-03-04 02:26:55 (39040): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-04 02:26:59 (39040): Adding VirtualBox Guest Additions to VM.
2026-03-04 02:27:00 (39040): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-04 02:27:00 (39040): forwarding host port 57283 to guest port 80
2026-03-04 02:27:01 (39040): Enabling remote desktop for VM.
2026-03-04 02:27:02 (39040): Enabling shared directory for VM.
2026-03-04 02:27:04 (39040): Starting VM using VBoxManage interface. (boinc_a29241c462ca79a8, slot#2)
2026-03-04 02:27:18 (39040): Successfully started VM. (PID = '39432')
2026-03-04 02:27:18 (39040): Reporting VM Process ID to BOINC.
2026-03-04 02:27:18 (39040): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-04 02:27:18 (39040): Guest Log: CPUID EDX: 0x178bfbff
2026-03-04 02:27:18 (39040): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-04 02:27:18 (39040): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-04 02:27:18 (39040): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-04 02:27:18 (39040): Detected: Web Application Enabled (http://localhost:57283)
2026-03-04 02:27:18 (39040): Detected: Remote Desktop Enabled (localhost:57284)
2026-03-04 02:27:18 (39040): Preference change detected
2026-03-04 02:27:18 (39040): Setting CPU throttle for VM. (100%)
2026-03-04 02:27:18 (39040): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-04 02:27:19 (39040): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-04 02:27:19 (39040): Guest Log: BIOS: Booting from Hard Disk...
2026-03-04 02:27:24 (39040): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-04 02:27:24 (39040): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-04 02:27:24 (39040): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-04 02:27:37 (39040): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-04 02:27:37 (39040): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-04 02:28:01 (39040): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000214 main     Log opened 2026-03-04T02:27:59.411379000Z
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000506 main     OS Product: Linux
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000581 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000636 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000689 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000691 main     Process ID: 1374
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.000692 main     Package type: LINUX_64BITS_GENERIC
2026-03-04 02:28:01 (39040): Guest Log: 00:00:00.002917 main     5.2.32 r132073 started. Verbose level = 0
2026-03-04 02:28:01 (39040): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-04 02:28:01 (39040): Guest Log: [INFO] Mounting shared directory
2026-03-04 02:28:02 (39040): Guest Log: [INFO] Checking for init_data.xml
2026-03-04 02:28:09 (39040): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-04 02:28:09 (39040): Guest Log: [INFO] Detected branch: prod
2026-03-04 02:28:10 (39040): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-04 02:28:10 (39040): Guest Log: Copying input files
2026-03-04 02:28:11 (39040): Guest Log: 00:00:10.009399 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 612 003 294 000ns (GuestNow=1 772 612 891 421 762 000 ns GuestLast=1 772 591 279 418 468 000 ns fSetTimeLastLoop=true )
2026-03-04 02:28:14 (39040): Guest Log: Copied input files into RunAtlas.
2026-03-04 02:28:14 (39040): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-04 02:28:14 (39040): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-04 02:28:14 (39040): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-04 02:28:14 (39040): Guest Log: Further information can be found at the LHC@home message board.
2026-03-04 02:28:22 (39040): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-04 02:28:22 (39040): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-04 02:28:22 (39040): Guest Log: 2.6.3.0 1672 0 34224 156875 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-04 02:28:25 (39040): Guest Log: copied the webapp to /var/www
2026-03-04 02:28:26 (39040): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-04 02:28:26 (39040): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-04 02:28:26 (39040): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-04 02:28:26 (39040): Guest Log:  *** Starting ATLAS job. (PandaID=7030478395 taskID=48838620) ***
2026-03-04 04:11:25 (39040): Status Report: Elapsed Time: '6000.000000'
2026-03-04 04:11:25 (39040): Status Report: CPU Time: '33570.750000'
2026-03-04 05:55:55 (39040): Status Report: Elapsed Time: '12000.208160'
2026-03-04 05:55:55 (39040): Status Report: CPU Time: '72272.031250'
2026-03-04 06:11:17 (39040): VM state change detected. (old = 'running', new = 'paused')
2026-03-04 08:40:40 (39040): VM state change detected. (old = 'paused', new = 'running')
2026-03-04 08:40:49 (39040): Guest Log: 03:43:24.452858 timesync vgsvcTimeSyncWorker: Radical host time change: 8 972 577 000 000ns (HostNow=1 772 635 248 457 000 000 ns HostLast=1 772 626 275 880 000 000 ns)
2026-03-04 08:40:58 (39040): Guest Log: 03:43:34.513545 timesync vgsvcTimeSyncWorker: Radical guest time change: 8 972 670 327 000ns (GuestNow=1 772 635 258 523 014 000 ns GuestLast=1 772 626 285 852 687 000 ns fSetTimeLastLoop=true )
2026-03-04 09:05:54 (39040): Guest Log:  *** Job finished ***
2026-03-04 09:05:54 (39040): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:43,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:43,527 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:45,695 | INFO     | [monitor] cgroup control has ended
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:46,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770990692160)>', '<ExcThread(monitor, started 139770550269696)>']
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:46,733 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:46,734 | INFO     | [monitor] control thread has ended
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,505 | INFO     | all workflow threads have been joined
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,509 | INFO     | end of generic workflow (traces error code: 0)
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,515 | INFO     | traces error code: 0
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,774 [wrapper] ==== pilot stdout END ====
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,788 [wrapper] ==== wrapper stdout RESUME ====
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,800 [wrapper] pilotpid: 6109
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,824 [wrapper] Pilot exit status: 0
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:51,971 [wrapper] pandaids: 7030478395
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:52,032 [wrapper] cleanup supervisor_pilot 28690 6110
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:52,072 [wrapper] Test setup, not cleaning
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:52,088 [wrapper] apfmon messages muted
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:52,110 [wrapper] ==== wrapper stdout END ====
2026-03-04 09:05:54 (39040): Guest Log: 2026-03-04 15:05:52,120 [wrapper] ==== wrapper stderr END ====
2026-03-04 09:05:54 (39040): Guest Log:  *** Error codes and diagnostics ***
2026-03-04 09:05:54 (39040): Guest Log:     "exeErrorCode": 0,
2026-03-04 09:05:54 (39040): Guest Log:     "exeErrorDiag": "",
2026-03-04 09:05:54 (39040): Guest Log:     "pilotErrorCode": 0,
2026-03-04 09:05:54 (39040): Guest Log:     "pilotErrorDiag": "",
2026-03-04 09:05:54 (39040): Guest Log:  *** Listing of results directory ***
2026-03-04 09:05:54 (39040): Guest Log: total 207872
2026-03-04 09:05:54 (39040): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 26 02:55 pilot3.tar.gz
2026-03-04 09:05:54 (39040): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 26 02:56 runpilot2-wrapper.sh
2026-03-04 09:05:54 (39040): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 26 02:57 queuedata.json
2026-03-04 09:05:54 (39040): Guest Log: -rwxr-xr-x. 1 atlas atlas     12096 Mar  4 08:28 init_data.xml
2026-03-04 09:05:54 (39040): Guest Log: -rwxr-xr-x. 1 atlas atlas    597964 Mar  4 08:28 input.tar.gz
2026-03-04 09:05:54 (39040): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  4 08:28 start_atlas.sh
2026-03-04 09:05:54 (39040): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  4 08:28 EVNT.48343799._000046.pool.root.1 -> /data/./ATLAS.root_0
2026-03-04 09:05:54 (39040): Guest Log: -rw-r--r--. 1 atlas atlas      2565 Mar  4 08:28 pandaJob.out
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas    997384 Mar  4 08:29 agis_schedconf.cvmfs.json
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas       427 Mar  4 08:30 workernode_map.json
2026-03-04 09:05:54 (39040): Guest Log: drwx------. 5 atlas atlas      4096 Mar  4 08:30 pilot3
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas 204031658 Mar  4 15:04 HITS.48838620._001144.pool.root.1
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas      1031 Mar  4 15:05 memory_monitor_summary.json
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas   1516092 Mar  4 15:05 agis_ddmendpoints.agis.ALL.json
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas    475460 Mar  4 15:05 log.48838620._001144.job.log.tgz.1
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas      6384 Mar  4 15:05 heartbeat.json
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas        97 Mar  4 15:05 pilot_heartbeat.json
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas      4987 Mar  4 15:05 pilotlog.txt
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas   2008379 Mar  4 15:05 log.48838620._001144.job.log.1
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 15:05 output.list
2026-03-04 09:05:54 (39040): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 15:05 runtime_log
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas   2498560 Mar  4 15:05 result.tar.gz
2026-03-04 09:05:54 (39040): Guest Log: -rw-r--r--. 1 atlas atlas      8746 Mar  4 15:05 runtime_log.err
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas       658 Mar  4 15:05 cXzLDmYjgF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmA0KDmhkFLcn.diag
2026-03-04 09:05:54 (39040): Guest Log: Looking for outputfile HITS.48838620._001144.pool.root.1
2026-03-04 09:05:54 (39040): Guest Log: HITS file was successfully produced
2026-03-04 09:05:54 (39040): Guest Log: -rw-------. 1 atlas atlas 204031658 Mar  4 15:04 /home/atlas/RunAtlas/HITS.48838620._001144.pool.root.1
2026-03-04 09:05:57 (39040): Guest Log: Successfully finished the ATLAS job!
2026-03-04 09:05:57 (39040): Guest Log: Copying the results back to the shared directory!
2026-03-04 09:05:57 (39040): Guest Log:  *** Contents of shared directory: ***
2026-03-04 09:05:57 (39040): Guest Log: total 466476
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root 270511226 Mar  4 08:26 ATLAS.root_0
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root 204031658 Mar  4 15:05 HITS.pool.root.1
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root     12096 Mar  4 08:26 init_data.xml
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root    597964 Mar  4 07:16 input.tar.gz
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root   2498560 Mar  4 15:05 result.tar.gz
2026-03-04 09:05:57 (39040): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  4 07:16 start_atlas.sh
2026-03-04 09:05:57 (39040): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-04 09:05:57 (39040): VM Completion File Detected.
2026-03-04 09:05:57 (39040): Powering off VM.
2026-03-04 09:05:58 (39040): Successfully stopped VM.
2026-03-04 09:05:58 (39040): Deregistering VM. (boinc_a29241c462ca79a8, slot#2)
2026-03-04 09:05:58 (39040): Removing network bandwidth throttle group from VM.
2026-03-04 09:05:59 (39040): Removing VM from VirtualBox.
2026-03-04 09:06:04 (39040): called boinc_finish(0)

</stderr_txt>
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