Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:32 (1584848): wrapper (7.7.26015): starting
11:53:32 (1584848): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 11:53:32] Arguments: --nthreads 12
[2026-03-04 11:53:32] Threads: 12
[2026-03-04 11:53:32] Checking for CVMFS
[2026-03-04 11:53:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 11:53:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 11:53:33] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 11:53:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 11:53:33] 2.13.3.0 8852 32660 216884 156878 2 188 36982435 46080000 6454 130560 0 110809042 99.822 49408409 25343 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-04 11:53:33] CVMFS is ok
[2026-03-04 11:53:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:53:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:53:33] Further information can be found at the LHC@home message board.
[2026-03-04 11:53:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:53:33] Checking for apptainer binary...
[2026-03-04 11:53:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 11:53:33] Running /usr/bin/apptainer --version
[2026-03-04 11:53:33] apptainer version 1.4.5-2.el9
[2026-03-04 11:53:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:53:33] mff2103.farm.particle.cz
[2026-03-04 11:53:33] apptainer works
[2026-03-04 11:53:33] Set ATHENA_PROC_NUMBER=12
[2026-03-04 11:53:33] Set ATHENA_CORE_NUMBER=12
[2026-03-04 11:53:33] Starting ATLAS job with PandaID=7036983767
[2026-03-04 11:53:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:58:11]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:58:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 12:58:11]  replicas=None
[2026-03-04 12:58:11]  scope=mc23_13p6TeV
[2026-03-04 12:58:11]  status=None
[2026-03-04 12:58:11]  status_code=0
[2026-03-04 12:58:11]  storage_token=
[2026-03-04 12:58:11]  surl=/scratch/.boinc/slots/3/PanDA_Pilot-7036983767/log.48838577._008543.job.log.tgz.1
[2026-03-04 12:58:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/2d/log.48838577._008543.job.log.tgz.1
[2026-03-04 12:58:11]  workdir=None
[2026-03-04 12:58:11] ]
[2026-03-04 12:58:11] 2026-03-04 11:57:33,277 | INFO     | transferring file log.48838577._008543.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-7036983767/log.48838577._008543.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-04 12:58:11] 2026-03-04 11:57:33,277 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-7036983767/log.48838577._008543.job.log.tgz.1 /scratch/.boinc/slots/3/log.48838577._008543.j
[2026-03-04 12:58:11] 2026-03-04 11:57:33,305 | INFO     | adding to output.list: log.48838577._008543.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/2d/log.48838577._008543.job.log.tg
[2026-03-04 12:58:11] 2026-03-04 11:57:33,306 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 12:58:11] 2026-03-04 11:57:33,306 | INFO     | summary of transferred files:
[2026-03-04 12:58:11] 2026-03-04 11:57:33,306 | INFO     |  -- lfn=log.48838577._008543.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 12:58:11] 2026-03-04 11:57:33,306 | INFO     | stage-out finished correctly
[2026-03-04 12:58:11] 2026-03-04 11:57:33,336 | INFO     | time since job start (3821s) is within the limit (349056.0s)
[2026-03-04 12:58:11] 2026-03-04 11:57:33,772 | WARNING  | process 1593991 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 12:58:11] 2026-03-04 11:57:33,773 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7036983767/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:58:11] 2026-03-04 11:57:34,117 | INFO     | number of running child processes to parent process 1593991: 1
[2026-03-04 12:58:11] 2026-03-04 11:57:34,117 | INFO     | maximum number of monitored processes: 6
[2026-03-04 12:58:11] 2026-03-04 11:57:34,784 | INFO     | PID=1589054 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 12:58:11] 2026-03-04 11:57:34,785 | INFO     | .. there are 8 such processes running
[2026-03-04 12:58:11] 2026-03-04 11:57:35,300 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 12:58:11] 2026-03-04 11:57:35,785 | INFO     | time since job start (3823s) is within the limit (349056.0s)
[2026-03-04 12:58:11] 2026-03-04 11:57:36,620 | INFO     | monitor loop #280: job 0:7036983767 is in state 'finished'
[2026-03-04 12:58:11] 2026-03-04 11:57:36,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 12:58:11] 2026-03-04 11:57:37,791 | INFO     | time since job start (3825s) is within the limit (349056.0s)
[2026-03-04 12:58:11] 2026-03-04 11:57:37,791 | INFO     | 3832s have passed since pilot start - server update state is 'RUNNING'
[2026-03-04 12:58:11] 2026-03-04 11:57:38,393 | INFO     | job 7036983767 has state=finished
[2026-03-04 12:58:11] 2026-03-04 11:57:38,393 | INFO     | preparing for final server update for job 7036983767 in state='finished'
[2026-03-04 12:58:11] 2026-03-04 11:57:38,393 | INFO     | reading metadata from: /scratch/.boinc/slots/3/PanDA_Pilot-7036983767/jobReport.json
[2026-03-04 12:58:11] 2026-03-04 11:57:38,397 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/3/workernode_map.json
[2026-03-04 12:58:11] 2026-03-04 11:57:38,397 | INFO     | this job has now completed (state=finished)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,397 | INFO     | log transfer has been attempted: DONE
[2026-03-04 12:58:11] 2026-03-04 11:57:38,398 | INFO     | job 7036983767 has finished - writing final server update
[2026-03-04 12:58:11] 2026-03-04 11:57:38,398 | INFO     | total number of processed events: 400 (read)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,416 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7036983767/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,417 | INFO     | extracted standard info from prmon json
[2026-03-04 12:58:11] 2026-03-04 11:57:38,417 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:58:11] 2026-03-04 11:57:38,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:58:11] 2026-03-04 11:57:38,417 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:58:11] 2026-03-04 11:57:38,417 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:58:11] 2026-03-04 11:57:38,419 | INFO     | fitting pss+swap vs Time
[2026-03-04 12:58:11] 2026-03-04 11:57:38,419 | INFO     | sum of square deviations: 54438230.0
[2026-03-04 12:58:11] 2026-03-04 11:57:38,419 | INFO     | sum of deviations: 242983831.5
[2026-03-04 12:58:11] 2026-03-04 11:57:38,419 | INFO     | mean x: 1772623639.5
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | mean y: 2746010.410714286
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | intersect: -7909320266.0494995
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | chi2: 0.0022859170349359497
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | current memory leak: 4.46 B/s (using 56 data points, chi2=0.00)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | could have reported an average CPU frequency of 2790 MHz (6 samples)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | ..............................
[2026-03-04 12:58:11] 2026-03-04 11:57:38,420 | INFO     | . Timing measurements:
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . get job = 0 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . initial setup = 7 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . payload setup = 7 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . stage-in = 0 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . payload execution = 3799 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . stage-out = 0 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | . log creation = 0 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,421 | INFO     | ..............................
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | 
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | job summary report
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | --------------------------------------------------
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | PanDA job id: 7036983767
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | task id: 48838577
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | errors: (none)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,513 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | pilot state: finished 
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | transexitcode: 0
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | exeerrorcode: 0
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | exeerrordiag: 
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | exitcode: 0
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | exitmsg: OK
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | cpuconsumptiontime: 40621 s
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | nevents: 400
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | neventsw: 0
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | pid: 1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | pgrp: 1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:38,514 | INFO     | corecount: 12
[2026-03-04 12:58:11] 2026-03-04 11:57:38,515 | INFO     | event service: False
[2026-03-04 12:58:11] 2026-03-04 11:57:38,515 | INFO     | sizes: {0: 2286817, 1: 2287079, 11: 2287107, 3807: 2312967, 3809: 2321967, 3811: 2322023, 3814: 2322345}
[2026-03-04 12:58:11] 2026-03-04 11:57:38,515 | INFO     | --------------------------------------------------
[2026-03-04 12:58:11] 2026-03-04 11:57:38,515 | INFO     | 
[2026-03-04 12:58:11] 2026-03-04 11:57:38,515 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:58:11] 2026-03-04 11:57:38,544 | INFO     | job 7036983767 has completed (purged errors)
[2026-03-04 12:58:11] 2026-03-04 11:57:38,545 | INFO     | overall cleanup function is called
[2026-03-04 12:58:11] 2026-03-04 11:57:39,554 | INFO     | --- collectZombieJob: --- 10, [1593991]
[2026-03-04 12:58:11] 2026-03-04 11:57:39,554 | INFO     | zombie collector waiting for pid 1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:39,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:58:11] 2026-03-04 11:57:39,555 | INFO     | collected zombie processes
[2026-03-04 12:58:11] 2026-03-04 11:57:39,555 | INFO     | will attempt to kill all subprocesses of pid=1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:39,913 | INFO     | process IDs to be killed: [1593991] (in reverse order)
[2026-03-04 12:58:11] 2026-03-04 11:57:40,033 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:58:11] 2026-03-04 11:57:40,033 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:58:11] 2026-03-04 11:57:40,046 | INFO     | did not find any defunct processes belonging to 1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:40,056 | INFO     | did not find any defunct processes belonging to 1593991
[2026-03-04 12:58:11] 2026-03-04 11:57:40,056 | INFO     | ready for new job
[2026-03-04 12:58:11] 2026-03-04 11:57:40,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:58:11] 2026-03-04 11:57:40,058 | INFO     | **************************************
[2026-03-04 12:58:11] 2026-03-04 11:57:40,058 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:58:11] 2026-03-04 11:57:40,058 | INFO     | **************************************
[2026-03-04 12:58:11] 2026-03-04 11:57:40,059 | INFO     | 
[2026-03-04 12:58:11] 2026-03-04 11:57:40,065 | INFO     | architecture information:
[2026-03-04 12:58:11] 2026-03-04 11:57:40,065 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:58:11] 2026-03-04 11:57:40,088 | INFO     | cat /etc/os-release:
[2026-03-04 12:58:11] NAME="CentOS Linux"
[2026-03-04 12:58:11] VERSION="7 (Core)"
[2026-03-04 12:58:11] ID="centos"
[2026-03-04 12:58:11] ID_LIKE="rhel fedora"
[2026-03-04 12:58:11] VERSION_ID="7"
[2026-03-04 12:58:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:58:11] ANSI_COLOR="0;31"
[2026-03-04 12:58:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:58:11] HOME_URL="https://www.centos.org/"
[2026-03-04 12:58:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:58:11] 
[2026-03-04 12:58:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:58:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:58:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:58:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:58:11] 
[2026-03-04 12:58:11] 2026-03-04 11:57:40,089 | INFO     | **************************************
[2026-03-04 12:58:11] 2026-03-04 11:57:40,591 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-03-04 12:58:11] 2026-03-04 11:57:40,623 | INFO     | sufficient remaining disk space (1678915928064 B)
[2026-03-04 12:58:11] 2026-03-04 11:57:40,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:58:11] 2026-03-04 11:57:40,624 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:58:11] 2026-03-04 11:57:40,624 | INFO     | update_server=False
[2026-03-04 12:58:11] 2026-03-04 11:57:40,624 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:58:11] 2026-03-04 11:57:40,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:58:11] 2026-03-04 11:57:40,625 | INFO     | aborting loop
[2026-03-04 12:58:11] 2026-03-04 11:57:40,894 | INFO     | all data control threads have been joined
[2026-03-04 12:58:11] 2026-03-04 11:57:41,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:58:11] 2026-03-04 11:57:41,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:58:11] 2026-03-04 11:57:41,629 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:41,630 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:41,900 | INFO     | [data] control thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:41,903 | INFO     | all job control threads have been joined
[2026-03-04 12:58:11] 2026-03-04 11:57:42,028 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,029 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,105 | INFO     | all payload control threads have been joined
[2026-03-04 12:58:11] 2026-03-04 11:57:42,120 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,516 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,837 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,908 | INFO     | [job] control thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,958 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:42,962 | INFO     | [job] validate thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:43,110 | INFO     | [payload] control thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:43,428 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:43,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:58:11] 2026-03-04 11:57:44,530 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:45,407 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:51,154 | INFO     | job.realtimelogging is not enabled
[2026-03-04 12:58:11] 2026-03-04 11:57:52,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:58:11] 2026-03-04 11:57:58,298 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:58:11] 2026-03-04 11:57:59,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139631047120704)>', '<ExcThread(monitor, started 139630678611712)>']
[2026-03-04 12:58:11] 2026-03-04 11:58:04,969 | INFO     | all workflow threads have been joined
[2026-03-04 12:58:11] 2026-03-04 11:58:04,970 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:58:11] 2026-03-04 11:58:04,970 | INFO     | traces error code: 0
[2026-03-04 12:58:11] 2026-03-04 11:58:04,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:58:11] 2026-03-04 11:58:11,311 | INFO     | PID=1589054 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 12:58:11] 2026-03-04 11:58:11,311 | INFO     | .. there are 8 such processes running
[2026-03-04 12:58:11] 2026-03-04 11:58:11,312 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:58:11] 2026-03-04 11:58:11,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:58:11] 2026-03-04 11:58:11,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:58:11] 2026-03-04 11:58:11,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:58:11] 2026-03-04 11:58:11,312 | INFO     | [monitor] control thread has ended
[2026-03-04 12:58:11] 2026-03-04 11:58:11,488 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:58:11] 2026-03-04 11:58:11,491 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:58:11] 2026-03-04 11:58:11,494 [wrapper] pilotpid: 1589054
[2026-03-04 12:58:11] 2026-03-04 11:58:11,497 [wrapper] Pilot exit status: 0
[2026-03-04 12:58:11] 2026-03-04 11:58:11,510 [wrapper] pandaids: 7036983767
[2026-03-04 12:58:11] 2026-03-04 11:58:11,594 [wrapper] cleanup supervisor_pilot 1720729 1589055
[2026-03-04 12:58:11] 2026-03-04 11:58:11,597 [wrapper] Test setup, not cleaning
[2026-03-04 12:58:11] 2026-03-04 11:58:11,600 [wrapper] apfmon messages muted
[2026-03-04 12:58:11] 2026-03-04 11:58:11,675 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:58:11] 2026-03-04 11:58:11,678 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:58:11]  *** Error codes and diagnostics ***
[2026-03-04 12:58:11]     "exeErrorCode": 0,
[2026-03-04 12:58:11]     "exeErrorDiag": "",
[2026-03-04 12:58:11]     "pilotErrorCode": 0,
[2026-03-04 12:58:11]     "pilotErrorDiag": "",
[2026-03-04 12:58:11]  *** Listing of results directory ***
[2026-03-04 12:58:11] total 515816
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc    584627 Mar  4 02:08 pilot3.tar.gz
[2026-03-04 12:58:11] -rwx------ 1 boinc boinc     36322 Mar  4 02:25 runpilot2-wrapper.sh
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc      5111 Mar  4 02:25 queuedata.json
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc       100 Mar  4 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:58:11] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 11:53 run_atlas
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc       105 Mar  4 11:53 job.xml
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc 293362203 Mar  4 11:53 EVNT.48220197._000339.pool.root.1
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc      6677 Mar  4 11:53 init_data.xml
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:53 start_atlas.sh
[2026-03-04 12:58:11] drwxrwx--x 2 boinc boinc      4096 Mar  4 11:53 shared
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc    597960 Mar  4 11:53 input.tar.gz
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc         0 Mar  4 11:53 boinc_lockfile
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc      2567 Mar  4 11:53 pandaJob.out
[2026-03-04 12:58:11] -rw------- 1 boinc boinc    997376 Mar  4 11:53 agis_schedconf.cvmfs.json
[2026-03-04 12:58:11] -rw------- 1 boinc boinc   1516092 Mar  4 11:53 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:58:11] -rw------- 1 boinc boinc       430 Mar  4 11:53 workernode_map.json
[2026-03-04 12:58:11] drwx------ 5 boinc boinc      4096 Mar  4 11:53 pilot3
[2026-03-04 12:58:11] -rw------- 1 boinc boinc 229011936 Mar  4 12:57 HITS.48838577._008543.pool.root.1
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc       529 Mar  4 12:57 boinc_task_state.xml
[2026-03-04 12:58:11] -rw------- 1 boinc boinc      1022 Mar  4 12:57 memory_monitor_summary.json
[2026-03-04 12:58:11] -rw------- 1 boinc boinc    376008 Mar  4 12:57 log.48838577._008543.job.log.tgz.1
[2026-03-04 12:58:11] -rw------- 1 boinc boinc      6329 Mar  4 12:57 heartbeat.json
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc        27 Mar  4 12:58 wrapper_checkpoint.txt
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc      8192 Mar  4 12:58 boinc_mmap_file
[2026-03-04 12:58:11] -rw------- 1 boinc boinc        95 Mar  4 12:58 pilot_heartbeat.json
[2026-03-04 12:58:11] -rw------- 1 boinc boinc       822 Mar  4 12:58 pilotlog.txt
[2026-03-04 12:58:11] -rw------- 1 boinc boinc    569620 Mar  4 12:58 log.48838577._008543.job.log.1
[2026-03-04 12:58:11] -rw------- 1 boinc boinc       357 Mar  4 12:58 output.list
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc       620 Mar  4 12:58 runtime_log
[2026-03-04 12:58:11] -rw------- 1 boinc boinc    962560 Mar  4 12:58 result.tar.gz
[2026-03-04 12:58:11] -rw------- 1 boinc boinc       662 Mar  4 12:58 z0ZNDmXAqH9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4uGLDmQXy3ym.diag
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc      8879 Mar  4 12:58 runtime_log.err
[2026-03-04 12:58:11] -rw-r--r-- 1 boinc boinc     22005 Mar  4 12:58 stderr.txt
[2026-03-04 12:58:11] HITS file was successfully produced:
[2026-03-04 12:58:11] -rw------- 1 boinc boinc 229011936 Mar  4 12:57 shared/HITS.pool.root.1
[2026-03-04 12:58:11]  *** Contents of shared directory: ***
[2026-03-04 12:58:11] total 511684
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc 293362203 Mar  4 11:53 ATLAS.root_0
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:53 start_atlas.sh
[2026-03-04 12:58:11] -rw-r--r-- 2 boinc boinc    597960 Mar  4 11:53 input.tar.gz
[2026-03-04 12:58:11] -rw------- 1 boinc boinc 229011936 Mar  4 12:57 HITS.pool.root.1
[2026-03-04 12:58:11] -rw------- 1 boinc boinc    962560 Mar  4 12:58 result.tar.gz
12:58:13 (1584848): run_atlas exited; CPU time 40718.983685
12:58:13 (1584848): called boinc_finish(0)

</stderr_txt>
]]>

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