Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:20 (472425): wrapper (7.7.26015): starting
00:09:20 (472425): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 00:09:20] Arguments: --nthreads 12
[2026-03-04 00:09:20] Threads: 12
[2026-03-04 00:09:20] Checking for CVMFS
[2026-03-04 00:09:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 00:09:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 00:09:20] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 00:09:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 00:09:20] 2.13.3.0 11285 170686 285904 156870 1 373 29738381 32935936 28962 16776704 0 918364078 99.534 1161615906 36555 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-04 00:09:20] CVMFS is ok
[2026-03-04 00:09:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 00:09:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 00:09:20] Further information can be found at the LHC@home message board.
[2026-03-04 00:09:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 00:09:20] Checking for apptainer binary...
[2026-03-04 00:09:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 00:09:20] Running /usr/bin/apptainer --version
[2026-03-04 00:09:21] apptainer version 1.4.5-2.el9
[2026-03-04 00:09:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 00:09:21] c7-3-29.aglt2.org
[2026-03-04 00:09:21] apptainer works
[2026-03-04 00:09:21] Set ATHENA_PROC_NUMBER=12
[2026-03-04 00:09:21] Set ATHENA_CORE_NUMBER=12
[2026-03-04 00:09:21] Starting ATLAS job with PandaID=7032459598
[2026-03-04 00:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 19:28:08]  *** The last 200 lines of the pilot log: ***
[2026-03-04 19:28:08] 2026-03-05 00:27:25,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 19:28:08] 2026-03-05 00:27:26,726 | INFO     | time since job start (69452s) is within the limit (349056.0s)
[2026-03-04 19:28:08] 2026-03-05 00:27:26,950 | INFO     | job 7032459598 has state=finished
[2026-03-04 19:28:08] 2026-03-05 00:27:26,951 | INFO     | preparing for final server update for job 7032459598 in state='finished'
[2026-03-04 19:28:08] 2026-03-05 00:27:26,951 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7032459598/jobReport.json
[2026-03-04 19:28:08] 2026-03-05 00:27:26,960 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-03-04 19:28:08] 2026-03-05 00:27:26,960 | INFO     | this job has now completed (state=finished)
[2026-03-04 19:28:08] 2026-03-05 00:27:26,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 19:28:08] 2026-03-05 00:27:26,960 | INFO     | log transfer has been attempted: DONE
[2026-03-04 19:28:08] 2026-03-05 00:27:26,961 | INFO     | job 7032459598 has finished - writing final server update
[2026-03-04 19:28:08] 2026-03-05 00:27:26,961 | INFO     | total number of processed events: 400 (read)
[2026-03-04 19:28:08] 2026-03-05 00:27:27,132 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7032459598/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 19:28:08] 2026-03-05 00:27:27,133 | INFO     | extracted standard info from prmon json
[2026-03-04 19:28:08] 2026-03-05 00:27:27,133 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 19:28:08] 2026-03-05 00:27:27,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 19:28:08] 2026-03-05 00:27:27,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 19:28:08] 2026-03-05 00:27:27,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 19:28:08] 2026-03-05 00:27:27,445 | INFO     | fitting pss+swap vs Time
[2026-03-04 19:28:08] 2026-03-05 00:27:27,522 | INFO     | sum of square deviations: 456988261737.16376
[2026-03-04 19:28:08] 2026-03-05 00:27:27,607 | INFO     | sum of deviations: 2618794843658.2954
[2026-03-04 19:28:08] 2026-03-05 00:27:27,607 | INFO     | mean x: 1772635707.5342708
[2026-03-04 19:28:08] 2026-03-05 00:27:27,607 | INFO     | mean y: 2645165.2873462215
[2026-03-04 19:28:08] 2026-03-05 00:27:27,607 | INFO     | intersect: -10155535337.924925
[2026-03-04 19:28:08] 2026-03-05 00:27:27,608 | INFO     | chi2: 7.229418422424324
[2026-03-04 19:28:08] 2026-03-05 00:27:27,618 | INFO     | sum of square deviations: 450991128629.65717
[2026-03-04 19:28:08] 2026-03-05 00:27:27,697 | INFO     | sum of deviations: 2683855510160.8696
[2026-03-04 19:28:08] 2026-03-05 00:27:27,698 | INFO     | mean x: 1772635555.034422
[2026-03-04 19:28:08] 2026-03-05 00:27:27,698 | INFO     | mean y: 2646812.567519859
[2026-03-04 19:28:08] 2026-03-05 00:27:27,698 | INFO     | intersect: -10546336082.820972
[2026-03-04 19:28:08] 2026-03-05 00:27:27,718 | INFO     | chi2: 6.506649269456371
[2026-03-04 19:28:08] 2026-03-05 00:27:27,718 | INFO     | current chi2=6.506649269456371 (change=9.997611297833526 %)
[2026-03-04 19:28:08] 2026-03-05 00:27:27,719 | INFO     | right removable region: 1132
[2026-03-04 19:28:08] 2026-03-05 00:27:27,720 | INFO     | sum of square deviations: 450991104839.657
[2026-03-04 19:28:08] 2026-03-05 00:27:27,827 | INFO     | sum of deviations: 2259696047049.1313
[2026-03-04 19:28:08] 2026-03-05 00:27:27,827 | INFO     | mean x: 1772635860.034422
[2026-03-04 19:28:08] 2026-03-05 00:27:27,852 | INFO     | mean y: 2654292.894086496
[2026-03-04 19:28:08] 2026-03-05 00:27:27,853 | INFO     | intersect: -8879157793.402952
[2026-03-04 19:28:08] 2026-03-05 00:27:27,854 | INFO     | chi2: 4.123573215294506
[2026-03-04 19:28:08] 2026-03-05 00:27:27,854 | INFO     | current chi2=4.123573215294506 (change=42.96120414743264 %)
[2026-03-04 19:28:08] 2026-03-05 00:27:27,855 | INFO     | sum of square deviations: 445046646604.65
[2026-03-04 19:28:08] 2026-03-05 00:27:28,180 | INFO     | sum of deviations: 2094045809550.0845
[2026-03-04 19:28:08] 2026-03-05 00:27:28,184 | INFO     | mean x: 1772636012.5345745
[2026-03-04 19:28:08] 2026-03-05 00:27:28,184 | INFO     | mean y: 2658541.651595745
[2026-03-04 19:28:08] 2026-03-05 00:27:28,184 | INFO     | intersect: -8337997527.156118
[2026-03-04 19:28:08] 2026-03-05 00:27:28,186 | INFO     | chi2: 3.592794137810244
[2026-03-04 19:28:08] 2026-03-05 00:27:28,186 | INFO     | current chi2=3.592794137810244 (change=12.87182377447744 %)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,186 | INFO     | left removable region: 20
[2026-03-04 19:28:08] 2026-03-05 00:27:28,187 | INFO     | sum of square deviations: 426375834924.6322
[2026-03-04 19:28:08] 2026-03-05 00:27:28,237 | INFO     | sum of deviations: 1911331411890.0127
[2026-03-04 19:28:08] 2026-03-05 00:27:28,240 | INFO     | mean x: 1772636134.5350718
[2026-03-04 19:28:08] 2026-03-05 00:27:28,240 | INFO     | mean y: 2666688.1663669064
[2026-03-04 19:28:08] 2026-03-05 00:27:28,240 | INFO     | intersect: -7943597729.907575
[2026-03-04 19:28:08] 2026-03-05 00:27:28,241 | INFO     | chi2: 2.333370409372385
[2026-03-04 19:28:08] 2026-03-05 00:27:28,242 | INFO     | current memory leak: 4.48 B/s (using 1112 data points, chi2=2.33)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,243 | INFO     | could have reported an average CPU frequency of 2993 MHz (42 samples)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,243 | INFO     | ..............................
[2026-03-04 19:28:08] 2026-03-05 00:27:28,243 | INFO     | . Timing measurements:
[2026-03-04 19:28:08] 2026-03-05 00:27:28,243 | INFO     | . get job = 0 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,243 | INFO     | . initial setup = 13 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | . payload setup = 12 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | . stage-in = 0 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | . payload execution = 69413 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | . stage-out = 4 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | . log creation = 0 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,244 | INFO     | ..............................
[2026-03-04 19:28:08] 2026-03-05 00:27:28,327 | INFO     | 
[2026-03-04 19:28:08] 2026-03-05 00:27:28,328 | INFO     | job summary report
[2026-03-04 19:28:08] 2026-03-05 00:27:28,328 | INFO     | --------------------------------------------------
[2026-03-04 19:28:08] 2026-03-05 00:27:28,328 | INFO     | PanDA job id: 7032459598
[2026-03-04 19:28:08] 2026-03-05 00:27:28,328 | INFO     | task id: 48843135
[2026-03-04 19:28:08] 2026-03-05 00:27:28,328 | INFO     | errors: (none)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | pilot state: finished 
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | transexitcode: 0
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | exeerrorcode: 0
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | exeerrordiag: 
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | exitcode: 0
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | exitmsg: OK
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | cpuconsumptiontime: 122230 s
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | nevents: 400
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | neventsw: 0
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | pid: 490855
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | pgrp: 490855
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | corecount: 12
[2026-03-04 19:28:08] 2026-03-05 00:27:28,329 | INFO     | event service: False
[2026-03-04 19:28:08] 2026-03-05 00:27:28,330 | INFO     | sizes: {0: 2286703, 1: 2287164, 11: 2287164, 69431: 2342789, 69437: 2360524, 69439: 2360580, 69443: 2360902}
[2026-03-04 19:28:08] 2026-03-05 00:27:28,330 | INFO     | --------------------------------------------------
[2026-03-04 19:28:08] 2026-03-05 00:27:28,330 | INFO     | 
[2026-03-04 19:28:08] 2026-03-05 00:27:28,330 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,362 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,363 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 19:28:08] 2026-03-05 00:27:28,363 | INFO     | job 7032459598 has completed (purged errors)
[2026-03-04 19:28:08] 2026-03-05 00:27:28,363 | INFO     | overall cleanup function is called
[2026-03-04 19:28:08] 2026-03-05 00:27:29,375 | INFO     | --- collectZombieJob: --- 10, [490855]
[2026-03-04 19:28:08] 2026-03-05 00:27:29,376 | INFO     | zombie collector waiting for pid 490855
[2026-03-04 19:28:08] 2026-03-05 00:27:29,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 19:28:08] 2026-03-05 00:27:29,376 | INFO     | collected zombie processes
[2026-03-04 19:28:08] 2026-03-05 00:27:29,376 | INFO     | will attempt to kill all subprocesses of pid=490855
[2026-03-04 19:28:08] 2026-03-05 00:27:30,486 | INFO     | process IDs to be killed: [490855] (in reverse order)
[2026-03-04 19:28:08] 2026-03-05 00:27:30,910 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 19:28:08] 2026-03-05 00:27:30,910 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 19:28:08] 2026-03-05 00:27:30,936 | INFO     | did not find any defunct processes belonging to 490855
[2026-03-04 19:28:08] 2026-03-05 00:27:30,962 | INFO     | did not find any defunct processes belonging to 490855
[2026-03-04 19:28:08] 2026-03-05 00:27:30,962 | INFO     | ready for new job
[2026-03-04 19:28:08] 2026-03-05 00:27:30,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 19:28:08] 2026-03-05 00:27:31,020 | INFO     | **************************************
[2026-03-04 19:28:08] 2026-03-05 00:27:31,020 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 19:28:08] 2026-03-05 00:27:31,020 | INFO     | **************************************
[2026-03-04 19:28:08] 2026-03-05 00:27:31,020 | INFO     | 
[2026-03-04 19:28:08] 2026-03-05 00:27:31,062 | INFO     | architecture information:
[2026-03-04 19:28:08] 2026-03-05 00:27:31,101 | INFO     | executing command: cat /etc/os-release
[2026-03-04 19:28:08] 2026-03-05 00:27:31,221 | INFO     | cat /etc/os-release:
[2026-03-04 19:28:08] NAME="CentOS Linux"
[2026-03-04 19:28:08] VERSION="7 (Core)"
[2026-03-04 19:28:08] ID="centos"
[2026-03-04 19:28:08] ID_LIKE="rhel fedora"
[2026-03-04 19:28:08] VERSION_ID="7"
[2026-03-04 19:28:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 19:28:08] ANSI_COLOR="0;31"
[2026-03-04 19:28:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 19:28:08] HOME_URL="https://www.centos.org/"
[2026-03-04 19:28:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 19:28:08] 
[2026-03-04 19:28:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 19:28:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 19:28:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 19:28:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 19:28:08] 
[2026-03-04 19:28:08] 2026-03-05 00:27:31,222 | INFO     | **************************************
[2026-03-04 19:28:08] 2026-03-05 00:27:31,727 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-04 19:28:08] 2026-03-05 00:27:31,794 | INFO     | sufficient remaining disk space (72260517888 B)
[2026-03-04 19:28:08] 2026-03-05 00:27:31,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 19:28:08] 2026-03-05 00:27:31,795 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 19:28:08] 2026-03-05 00:27:31,795 | INFO     | update_server=False
[2026-03-04 19:28:08] 2026-03-05 00:27:31,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 19:28:08] 2026-03-05 00:27:32,060 | INFO     | all data control threads have been joined
[2026-03-04 19:28:08] 2026-03-05 00:27:32,070 | INFO     | all payload control threads have been joined
[2026-03-04 19:28:08] 2026-03-05 00:27:32,246 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:28:08] 2026-03-05 00:27:32,247 | INFO     | aborting loop
[2026-03-04 19:28:08] 2026-03-05 00:27:32,801 | INFO     | [job] retrieve thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:32,930 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 19:28:08] 2026-03-05 00:27:32,985 | INFO     | all job control threads have been joined
[2026-03-04 19:28:08] 2026-03-05 00:27:33,030 | INFO     | [payload] failed_post thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,076 | INFO     | [data] control thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,080 | INFO     | [payload] control thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,139 | INFO     | [payload] validate_post thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,233 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,261 | INFO     | [job] job monitor thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,298 | INFO     | [job] validate thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 19:28:08] 2026-03-05 00:27:33,532 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,692 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,952 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:33,991 | INFO     | [job] control thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:34,231 | INFO     | [data] copytool_in thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:34,356 | INFO     | [job] queue monitor thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:34,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 19:28:08] 2026-03-05 00:27:34,944 | INFO     | [data] copytool_out thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:38,762 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 19:28:08] 2026-03-05 00:27:59,269 | INFO     | [monitor] cgroup control has ended
[2026-03-04 19:28:08] 2026-03-05 00:28:01,118 | INFO     | PID=476366 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 19:28:08] 2026-03-05 00:28:01,118 | INFO     | .. there are 38 such processes running
[2026-03-04 19:28:08] 2026-03-05 00:28:01,119 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 19:28:08] 2026-03-05 00:28:01,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 19:28:08] 2026-03-05 00:28:01,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 19:28:08] 2026-03-05 00:28:01,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925875763008)>', '<ExcThread(monitor, started 139925378811648)>']
[2026-03-04 19:28:08] 2026-03-05 00:28:02,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 19:28:08] 2026-03-05 00:28:02,142 | INFO     | [monitor] control thread has ended
[2026-03-04 19:28:08] 2026-03-05 00:28:06,284 | INFO     | all workflow threads have been joined
[2026-03-04 19:28:08] 2026-03-05 00:28:06,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 19:28:08] 2026-03-05 00:28:06,285 | INFO     | traces error code: 0
[2026-03-04 19:28:08] 2026-03-05 00:28:06,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 19:28:08] 2026-03-05 00:28:07,524 [wrapper] ==== pilot stdout END ====
[2026-03-04 19:28:08] 2026-03-05 00:28:07,544 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 19:28:08] 2026-03-05 00:28:07,582 [wrapper] pilotpid: 476366
[2026-03-04 19:28:08] 2026-03-05 00:28:07,588 [wrapper] Pilot exit status: 0
[2026-03-04 19:28:08] 2026-03-05 00:28:07,616 [wrapper] pandaids: 7032459598
[2026-03-04 19:28:08] 2026-03-05 00:28:08,009 [wrapper] cleanup supervisor_pilot  152256 476367
[2026-03-04 19:28:08] 2026-03-05 00:28:08,029 [wrapper] Test setup, not cleaning
[2026-03-04 19:28:08] 2026-03-05 00:28:08,053 [wrapper] apfmon messages muted
[2026-03-04 19:28:08] 2026-03-05 00:28:08,089 [wrapper] ==== wrapper stdout END ====
[2026-03-04 19:28:08] 2026-03-05 00:28:08,092 [wrapper] ==== wrapper stderr END ====
[2026-03-04 19:28:08]  *** Error codes and diagnostics ***
[2026-03-04 19:28:08]     "exeErrorCode": 0,
[2026-03-04 19:28:08]     "exeErrorDiag": "",
[2026-03-04 19:28:08]     "pilotErrorCode": 0,
[2026-03-04 19:28:08]     "pilotErrorDiag": "",
[2026-03-04 19:28:08]  *** Listing of results directory ***
[2026-03-04 19:28:08] total 503920
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas    584627 Feb 27 19:57 pilot3.tar.gz
[2026-03-04 19:28:08] -rwx------. 1 boincer umatlas     36322 Feb 27 20:01 runpilot2-wrapper.sh
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas      5111 Feb 27 20:02 queuedata.json
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas       100 Mar  4 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 19:28:08] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  4 00:09 run_atlas
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas       105 Mar  4 00:09 job.xml
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas 229030129 Mar  4 00:09 EVNT.48450240._000002.pool.root.1
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 00:09 start_atlas.sh
[2026-03-04 19:28:08] drwxrwx--x. 2 boincer umatlas      4096 Mar  4 00:09 shared
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas    597966 Mar  4 00:09 input.tar.gz
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas         0 Mar  4 00:09 boinc_lockfile
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas      2611 Mar  4 00:09 pandaJob.out
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas        57 Mar  4 00:09 setup.sh.local
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas    997749 Mar  4 00:09 agis_schedconf.cvmfs.json
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas       429 Mar  4 00:09 workernode_map.json
[2026-03-04 19:28:08] drwx------. 5 boincer umatlas      4096 Mar  4 00:09 pilot3
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas      6947 Mar  4 19:18 init_data.xml
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas 264440115 Mar  4 19:25 HITS.48843135._000035.pool.root.1
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas       531 Mar  4 19:25 boinc_task_state.xml
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas        95 Mar  4 19:27 pilot_heartbeat.json
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas      1044 Mar  4 19:27 memory_monitor_summary.json
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas   1521291 Mar  4 19:27 agis_ddmendpoints.agis.ALL.json
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas   1165453 Mar  4 19:27 log.48843135._000035.job.log.tgz.1
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas      6334 Mar  4 19:27 heartbeat.json
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas      4819 Mar  4 19:28 pilotlog.txt
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas      8192 Mar  4 19:28 boinc_mmap_file
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas        29 Mar  4 19:28 wrapper_checkpoint.txt
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas   8135073 Mar  4 19:28 log.48843135._000035.job.log.1
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas       357 Mar  4 19:28 output.list
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas       620 Mar  4 19:28 runtime_log
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas   9318400 Mar  4 19:28 result.tar.gz
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas      9339 Mar  4 19:28 runtime_log.err
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas       662 Mar  4 19:28 KcFMDmpsNG9n9Rq4apOajLDm4fhM0noT9bVooX4SDmIT4KDmZ6nrdm.diag
[2026-03-04 19:28:08] -rw-r--r--. 1 boincer umatlas     21342 Mar  4 19:28 stderr.txt
[2026-03-04 19:28:08] HITS file was successfully produced:
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas 264440115 Mar  4 19:25 shared/HITS.pool.root.1
[2026-03-04 19:28:08]  *** Contents of shared directory: ***
[2026-03-04 19:28:08] total 491616
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas 229030129 Mar  4 00:09 ATLAS.root_0
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas     15845 Mar  4 00:09 start_atlas.sh
[2026-03-04 19:28:08] -rw-r--r--. 2 boincer umatlas    597966 Mar  4 00:09 input.tar.gz
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas 264440115 Mar  4 19:25 HITS.pool.root.1
[2026-03-04 19:28:08] -rw-------. 1 boincer umatlas   9318400 Mar  4 19:28 result.tar.gz
19:28:09 (472425): run_atlas exited; CPU time 125915.450118
19:28:09 (472425): called boinc_finish(0)

</stderr_txt>
]]>

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