Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:32:36 (1938828): wrapper (7.7.26015): starting
01:32:36 (1938828): wrapper: running run_atlas (--nthreads 4)
[2026-03-06 01:32:36] Arguments: --nthreads 4
[2026-03-06 01:32:36] Threads: 4
[2026-03-06 01:32:36] Checking for CVMFS
[2026-03-06 01:32:36] No cvmfs_config command found, will try listing directly
[2026-03-06 01:32:36] CVMFS is ok
[2026-03-06 01:32:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 01:32:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 01:32:36] Further information can be found at the LHC@home message board.
[2026-03-06 01:32:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 01:32:36] Checking for apptainer binary...
[2026-03-06 01:32:36] which: no apptainer in ((null))
[2026-03-06 01:32:36] apptainer is not installed, using version from CVMFS
[2026-03-06 01:32:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 01:32:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-06 01:32:36] apptainer works
[2026-03-06 01:32:36] Set ATHENA_PROC_NUMBER=4
[2026-03-06 01:32:36] Set ATHENA_CORE_NUMBER=4
[2026-03-06 01:32:36] Starting ATLAS job with PandaID=7030658949
[2026-03-06 01:32:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 03:09:03]  *** The last 200 lines of the pilot log: ***
[2026-03-06 03:09:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-06 03:09:03]  is_altstaged=None
[2026-03-06 03:09:03]  is_tar=False
[2026-03-06 03:09:03]  lfn=log.48838416._005267.job.log.tgz.1
[2026-03-06 03:09:03]  mtime=0
[2026-03-06 03:09:03]  protocol_id=None
[2026-03-06 03:09:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-06 03:09:03]  replicas=None
[2026-03-06 03:09:03]  scope=mc23_13p6TeV
[2026-03-06 03:09:03]  status=None
[2026-03-06 03:09:03]  status_code=0
[2026-03-06 03:09:03]  storage_token=
[2026-03-06 03:09:03]  surl=/var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7030658949/log.48838416._005267.job.log.tgz.1
[2026-03-06 03:09:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/07/log.48838416._005267.job.log.tgz.1
[2026-03-06 03:09:03]  workdir=None
[2026-03-06 03:09:03] ]
[2026-03-06 03:09:03] 2026-03-06 02:08:22,144 | INFO     | transferring file log.48838416._005267.job.log.tgz.1 from /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7030658949/log.48838416._005267.job.log.tgz.1 to /var/lib/
[2026-03-06 03:09:03] 2026-03-06 02:08:22,144 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7030658949/log.48838416._005267.job.log.tgz.1 /var/lib/boinc/var/slot128/slots/0/
[2026-03-06 03:09:03] 2026-03-06 02:08:22,164 | INFO     | adding to output.list: log.48838416._005267.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/07/log.48838416._005267.job.log.tg
[2026-03-06 03:09:03] 2026-03-06 02:08:22,165 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-06 03:09:03] 2026-03-06 02:08:22,165 | INFO     | summary of transferred files:
[2026-03-06 03:09:03] 2026-03-06 02:08:22,165 | INFO     |  -- lfn=log.48838416._005267.job.log.tgz.1, status_code=0, status=transferred
[2026-03-06 03:09:03] 2026-03-06 02:08:22,165 | INFO     | stage-out finished correctly
[2026-03-06 03:09:03] 2026-03-06 02:08:22,564 | INFO     | time since job start (5735s) is within the limit (349056.0s)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,298 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-06 03:09:03] 2026-03-06 02:08:23,345 | INFO     | job 7030658949 has state=finished
[2026-03-06 03:09:03] 2026-03-06 02:08:23,346 | INFO     | preparing for final server update for job 7030658949 in state='finished'
[2026-03-06 03:09:03] 2026-03-06 02:08:23,346 | INFO     | reading metadata from: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7030658949/jobReport.json
[2026-03-06 03:09:03] 2026-03-06 02:08:23,347 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot128/slots/0/workernode_map.json
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | INFO     | this job has now completed (state=finished)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | INFO     | log transfer has been attempted: DONE
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | INFO     | job 7030658949 has finished - writing final server update
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19273/.job.ad'
[2026-03-06 03:09:03] 2026-03-06 02:08:23,348 | INFO     | total number of processed events: 400 (read)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,365 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7030658949/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,366 | INFO     | extracted standard info from prmon json
[2026-03-06 03:09:03] 2026-03-06 02:08:23,366 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 03:09:03] 2026-03-06 02:08:23,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 03:09:03] 2026-03-06 02:08:23,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 03:09:03] 2026-03-06 02:08:23,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 03:09:03] 2026-03-06 02:08:23,367 | INFO     | fitting pss+swap vs Time
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | sum of square deviations: 204163828.0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | sum of deviations: -195264294.0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | mean x: 1772760115.0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | mean y: 2356130.540229885
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | intersect: 1697841347.8669436
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | chi2: 0.0007412152258186234
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | current memory leak: -0.96 B/s (using 87 data points, chi2=0.00)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | could have reported an average CPU frequency of 3623 MHz (7 samples)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | ..............................
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | . Timing measurements:
[2026-03-06 03:09:03] 2026-03-06 02:08:23,368 | INFO     | . get job = 0 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . initial setup = 4 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . payload setup = 4 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . stage-in = 0 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . payload execution = 5714 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . stage-out = 0 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | . log creation = 0 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,369 | INFO     | ..............................
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | 
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | job summary report
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | --------------------------------------------------
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | PanDA job id: 7030658949
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | task id: 48838416
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | errors: (none)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | pilot state: finished 
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | transexitcode: 0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | exeerrorcode: 0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | exeerrordiag: 
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | exitcode: 0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | exitmsg: OK
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | cpuconsumptiontime: 22082 s
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | nevents: 400
[2026-03-06 03:09:03] 2026-03-06 02:08:23,758 | INFO     | neventsw: 0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | pid: 1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | pgrp: 1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | corecount: 4
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | event service: False
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | sizes: {0: 2295395, 1: 2295856, 11: 2295856, 5723: 2322554, 5724: 2331576, 5725: 2331954}
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | --------------------------------------------------
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | 
[2026-03-06 03:09:03] 2026-03-06 02:08:23,759 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 03:09:03] 2026-03-06 02:08:23,777 | INFO     | job 7030658949 has completed (purged errors)
[2026-03-06 03:09:03] 2026-03-06 02:08:23,778 | INFO     | overall cleanup function is called
[2026-03-06 03:09:03] 2026-03-06 02:08:24,784 | INFO     | --- collectZombieJob: --- 10, [1958014]
[2026-03-06 03:09:03] 2026-03-06 02:08:24,784 | INFO     | zombie collector waiting for pid 1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:24,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 03:09:03] 2026-03-06 02:08:24,784 | INFO     | collected zombie processes
[2026-03-06 03:09:03] 2026-03-06 02:08:24,784 | INFO     | will attempt to kill all subprocesses of pid=1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:25,252 | WARNING  | process 1958014 can no longer be monitored (due to stat problems) - aborting
[2026-03-06 03:09:03] 2026-03-06 02:08:26,028 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 03:09:03] 2026-03-06 02:08:26,057 | INFO     | process IDs to be killed: [1958014] (in reverse order)
[2026-03-06 03:09:03] 2026-03-06 02:08:26,281 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 03:09:03] 2026-03-06 02:08:26,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 03:09:03] 2026-03-06 02:08:26,338 | INFO     | did not find any defunct processes belonging to 1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:26,398 | INFO     | did not find any defunct processes belonging to 1958014
[2026-03-06 03:09:03] 2026-03-06 02:08:26,398 | INFO     | ready for new job
[2026-03-06 03:09:03] 2026-03-06 02:08:26,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 03:09:03] 2026-03-06 02:08:26,399 | INFO     | **************************************
[2026-03-06 03:09:03] 2026-03-06 02:08:26,400 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 03:09:03] 2026-03-06 02:08:26,400 | INFO     | **************************************
[2026-03-06 03:09:03] 2026-03-06 02:08:26,400 | INFO     | 
[2026-03-06 03:09:03] 2026-03-06 02:08:26,408 | INFO     | architecture information:
[2026-03-06 03:09:03] 2026-03-06 02:08:26,408 | INFO     | executing command: cat /etc/os-release
[2026-03-06 03:09:03] 2026-03-06 02:08:26,422 | INFO     | cat /etc/os-release:
[2026-03-06 03:09:03] NAME="CentOS Linux"
[2026-03-06 03:09:03] VERSION="7 (Core)"
[2026-03-06 03:09:03] ID="centos"
[2026-03-06 03:09:03] ID_LIKE="rhel fedora"
[2026-03-06 03:09:03] VERSION_ID="7"
[2026-03-06 03:09:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 03:09:03] ANSI_COLOR="0;31"
[2026-03-06 03:09:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 03:09:03] HOME_URL="https://www.centos.org/"
[2026-03-06 03:09:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 03:09:03] 
[2026-03-06 03:09:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 03:09:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 03:09:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 03:09:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 03:09:03] 
[2026-03-06 03:09:03] 2026-03-06 02:08:26,423 | INFO     | **************************************
[2026-03-06 03:09:03] 2026-03-06 02:08:26,597 | INFO     | number of running child processes to parent process 1958014: 1
[2026-03-06 03:09:03] 2026-03-06 02:08:26,597 | INFO     | maximum number of monitored processes: 6
[2026-03-06 03:09:03] 2026-03-06 02:08:26,597 | INFO     | aborting job monitoring since job object (job id=7030658949) has expired
[2026-03-06 03:09:03] 2026-03-06 02:08:26,925 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-03-06 03:09:03] 2026-03-06 02:08:26,941 | INFO     | sufficient remaining disk space (19918749696 B)
[2026-03-06 03:09:03] 2026-03-06 02:08:26,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 03:09:03] 2026-03-06 02:08:26,941 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 03:09:03] 2026-03-06 02:08:26,941 | INFO     | update_server=False
[2026-03-06 03:09:03] 2026-03-06 02:08:26,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 03:09:03] 2026-03-06 02:08:26,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 03:09:03] 2026-03-06 02:08:26,942 | INFO     | will abort loop
[2026-03-06 03:09:03] 2026-03-06 02:08:27,096 | INFO     | all data control threads have been joined
[2026-03-06 03:09:03] 2026-03-06 02:08:27,312 | INFO     | all payload control threads have been joined
[2026-03-06 03:09:03] 2026-03-06 02:08:27,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 03:09:03] 2026-03-06 02:08:27,947 | INFO     | [job] retrieve thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:27,947 | INFO     | [job] job monitor thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:27,966 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:27,994 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,101 | INFO     | [data] control thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,211 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,317 | INFO     | [payload] control thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,378 | INFO     | [data] copytool_in thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,406 | INFO     | all job control threads have been joined
[2026-03-06 03:09:03] 2026-03-06 02:08:28,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 03:09:03] 2026-03-06 02:08:28,554 | INFO     | [payload] failed_post thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:28,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:29,025 | INFO     | [payload] validate_post thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:29,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 03:09:03] 2026-03-06 02:08:29,411 | INFO     | [job] control thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:29,434 | INFO     | [job] queue monitor thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:29,438 | INFO     | [job] validate thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:29,729 | INFO     | [data] copytool_out thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:33,357 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 03:09:03] 2026-03-06 02:08:56,224 | INFO     | PID=1943660 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 03:09:03] 2026-03-06 02:08:56,224 | INFO     | .. there are 43 such processes running
[2026-03-06 03:09:03] 2026-03-06 02:08:56,225 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 03:09:03] 2026-03-06 02:08:56,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 03:09:03] 2026-03-06 02:08:56,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 03:09:03] 2026-03-06 02:08:56,399 | INFO     | [monitor] cgroup control has ended
[2026-03-06 03:09:03] 2026-03-06 02:08:57,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23450071844672)>', '<ExcThread(monitor, started 23449834895104)>']
[2026-03-06 03:09:03] 2026-03-06 02:08:58,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 03:09:03] 2026-03-06 02:08:58,235 | INFO     | [monitor] control thread has ended
[2026-03-06 03:09:03] 2026-03-06 02:09:02,783 | INFO     | all workflow threads have been joined
[2026-03-06 03:09:03] 2026-03-06 02:09:02,783 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 03:09:03] 2026-03-06 02:09:02,783 | INFO     | traces error code: 0
[2026-03-06 03:09:03] 2026-03-06 02:09:02,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 03:09:03] 2026-03-06 02:09:02,917 [wrapper] ==== pilot stdout END ====
[2026-03-06 03:09:03] 2026-03-06 02:09:02,919 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 03:09:03] 2026-03-06 02:09:02,921 [wrapper] pilotpid: 1943660
[2026-03-06 03:09:03] 2026-03-06 02:09:02,923 [wrapper] Pilot exit status: 0
[2026-03-06 03:09:03] 2026-03-06 02:09:02,932 [wrapper] pandaids: 7030658949
[2026-03-06 03:09:03] 2026-03-06 02:09:03,059 [wrapper] cleanup supervisor_pilot 2739412 1943661
[2026-03-06 03:09:03] 2026-03-06 02:09:03,061 [wrapper] Test setup, not cleaning
[2026-03-06 03:09:03] 2026-03-06 02:09:03,064 [wrapper] apfmon messages muted
[2026-03-06 03:09:03] 2026-03-06 02:09:03,066 [wrapper] ==== wrapper stdout END ====
[2026-03-06 03:09:03] 2026-03-06 02:09:03,068 [wrapper] ==== wrapper stderr END ====
[2026-03-06 03:09:03]  *** Error codes and diagnostics ***
[2026-03-06 03:09:03]     "exeErrorCode": 0,
[2026-03-06 03:09:03]     "exeErrorDiag": "",
[2026-03-06 03:09:03]     "pilotErrorCode": 0,
[2026-03-06 03:09:03]     "pilotErrorDiag": "",
[2026-03-06 03:09:03]  *** Listing of results directory ***
[2026-03-06 03:09:03] total 514100
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc    584627 Feb 26 13:16 pilot3.tar.gz
[2026-03-06 03:09:03] -rwx------. 1 boinc boinc     36322 Feb 26 13:19 runpilot2-wrapper.sh
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc      5111 Feb 26 13:21 queuedata.json
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc       100 Mar  6 01:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 03:09:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 01:32 run_atlas
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc       105 Mar  6 01:32 job.xml
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 01:32 start_atlas.sh
[2026-03-06 03:09:03] drwxrwx--x. 2 boinc boinc      4096 Mar  6 01:32 shared
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc    597970 Mar  6 01:32 input.tar.gz
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc      6705 Mar  6 01:32 init_data.xml
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc 291286257 Mar  6 01:32 EVNT.48220085._000222.pool.root.1
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc         0 Mar  6 01:32 boinc_lockfile
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc      2568 Mar  6 01:32 pandaJob.out
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc    998560 Mar  6 01:32 agis_schedconf.cvmfs.json
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc   1521291 Mar  6 01:32 agis_ddmendpoints.agis.ALL.json
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc       444 Mar  6 01:32 workernode_map.json
[2026-03-06 03:09:03] drwx------. 5 boinc boinc      4096 Mar  6 01:32 pilot3
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc 228974309 Mar  6 03:07 HITS.48838416._005267.pool.root.1
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc      1031 Mar  6 03:08 memory_monitor_summary.json
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc       529 Mar  6 03:08 boinc_task_state.xml
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc    287089 Mar  6 03:08 log.48838416._005267.job.log.tgz.1
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc      6353 Mar  6 03:08 heartbeat.json
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc        27 Mar  6 03:08 wrapper_checkpoint.txt
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc      8192 Mar  6 03:08 boinc_mmap_file
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc        95 Mar  6 03:08 pilot_heartbeat.json
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc      5120 Mar  6 03:09 pilotlog.txt
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc    833030 Mar  6 03:09 log.48838416._005267.job.log.1
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc       357 Mar  6 03:09 output.list
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc       620 Mar  6 03:09 runtime_log
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc   1136640 Mar  6 03:09 result.tar.gz
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc       661 Mar  6 03:09 wCJNDmXWpF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmG90KDmFxME3n.diag
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc      9221 Mar  6 03:09 runtime_log.err
[2026-03-06 03:09:03] -rw-r--r--. 1 boinc boinc     21336 Mar  6 03:09 stderr.txt
[2026-03-06 03:09:03] HITS file was successfully produced:
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc 228974309 Mar  6 03:07 shared/HITS.pool.root.1
[2026-03-06 03:09:03]  *** Contents of shared directory: ***
[2026-03-06 03:09:03] total 509788
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 01:32 start_atlas.sh
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc    597970 Mar  6 01:32 input.tar.gz
[2026-03-06 03:09:03] -rw-r--r--. 2 boinc boinc 291286257 Mar  6 01:32 ATLAS.root_0
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc 228974309 Mar  6 03:07 HITS.pool.root.1
[2026-03-06 03:09:03] -rw-------. 1 boinc boinc   1136640 Mar  6 03:09 result.tar.gz
03:09:04 (1938828): run_atlas exited; CPU time 22339.292429
03:09:04 (1938828): called boinc_finish(0)

</stderr_txt>
]]>

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