Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:16 (643490): wrapper (7.7.26015): starting
01:13:16 (643490): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 01:13:16] Arguments: --nthreads 12
[2026-03-04 01:13:16] Threads: 12
[2026-03-04 01:13:16] Checking for CVMFS
[2026-03-04 01:13:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 01:13:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 01:13:17] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 01:13:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 01:13:17] 2.11.5.0 2137812 134117 282028 156875 0 489 37491666 45568001 21343 130560 0 984392946 99.803 589755233 23450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-04 01:13:17] CVMFS is ok
[2026-03-04 01:13:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 01:13:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 01:13:17] Further information can be found at the LHC@home message board.
[2026-03-04 01:13:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 01:13:17] Checking for apptainer binary...
[2026-03-04 01:13:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 01:13:17] Running /usr/bin/apptainer --version
[2026-03-04 01:13:17] apptainer version 1.4.1-1.el9
[2026-03-04 01:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 01:13:19] wns0059.triumf.lcg
[2026-03-04 01:13:19] apptainer works
[2026-03-04 01:13:19] Set ATHENA_PROC_NUMBER=12
[2026-03-04 01:13:19] Set ATHENA_CORE_NUMBER=12
[2026-03-04 01:13:19] Starting ATLAS job with PandaID=7037240686
[2026-03-04 01:13:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 01:20:01]  *** The last 200 lines of the pilot log: ***
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | WARNING  | wrong length of table data, x=[1772615785.0], y=[1138.0] (must be same and length>=4)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | could have reported an average CPU frequency of 2088 MHz (4 samples)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . Timing measurements:
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . get job = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . initial setup = 39 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . payload setup = 45 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-in = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . payload execution = 64 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-out = 2 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . log creation = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7037240686/pilotlog.txt
[2026-03-04 01:20:01] 2026-03-04 09:18:58,698 | INFO     | time since job start (245s) is within the limit (349056.0s)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,717 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-04 01:20:01] - Log from pilotlog.txt -
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | INFO     | extracted standard info from prmon json
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | WARNING  | wrong length of table data, x=[1772615785.0], y=[1138.0] (must be same and length>=4)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | could have reported an average CPU frequency of 2088 MHz (4 samples)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . Timing measurements:
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . get job = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . initial setup = 39 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . payload setup = 45 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-in = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . payload execution = 64 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-out = 2 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . log creation = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7037240686/pilotlog.txt
[2026-03-04 01:20:01] 2026-03-04 09:18:58,698 | INFO     | time since job start (245s) is within the limit (349056.0s)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,717 | WARNING  | 
[2026-03-04 01:20:01] [begin log extracts]
[2026-03-04 01:20:01] - Log from pilotlog.txt -
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | INFO     | extracted standard info from prmon json
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 01:20:01] 2026-03-04 09:18:58,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 01:20:01] 2026-03-04 09:18:58,628 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | WARNING  | wrong length of table data, x=[1772615785.0], y=[1138.0] (must be same and length>=4)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | could have reported an average CPU frequency of 2088 MHz (4 samples)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . Timing measurements:
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . get job = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . initial setup = 39 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,629 | INFO     | . payload setup = 45 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-in = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . payload execution = 64 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . stage-out = 2 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | . log creation = 0 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | ..............................
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-04 01:20:01] 2026-03-04 09:18:58,630 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7037240686/pilotlog.txt
[2026-03-04 01:20:01] 2026-03-04 09:18:58,698 | INFO     | time since job start (245s) is within the limit (349056.0s)
[2026-03-04 01:20:01] [end log extracts]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,717 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,718 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-04 01:20:01] 2026-03-04 09:18:58,789 | INFO     | 
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | job summary report
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | --------------------------------------------------
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | PanDA job id: 7037240686
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | task id: 48937795
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-04 01:16:49,961 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | pilot state: failed 
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | transexitcode: 65
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | exeerrorcode: 65
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | exitcode: 65
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | cpuconsumptiontime: 17 s
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | nevents: 0
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | neventsw: 0
[2026-03-04 01:20:01] 2026-03-04 09:18:58,790 | INFO     | pid: 652284
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | pgrp: 652284
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | corecount: 12
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | event service: False
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | sizes: {0: 2285946, 1: 2286628, 2: 2286628, 3: 2287117, 14: 2287117, 113: 2310585, 116: 2314933, 232: 2315071}
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | --------------------------------------------------
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | 
[2026-03-04 01:20:01] 2026-03-04 09:18:58,791 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,848 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 01:20:01] 2026-03-04 09:18:58,849 | INFO     | job 7037240686 has completed (purged errors)
[2026-03-04 01:20:01] 2026-03-04 09:18:58,849 | INFO     | overall cleanup function is called
[2026-03-04 01:20:01] 2026-03-04 09:18:59,904 | INFO     | --- collectZombieJob: --- 10, [652284]
[2026-03-04 01:20:01] 2026-03-04 09:18:59,906 | INFO     | zombie collector waiting for pid 652284
[2026-03-04 01:20:01] 2026-03-04 09:18:59,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 01:20:01] 2026-03-04 09:18:59,906 | INFO     | collected zombie processes
[2026-03-04 01:20:01] 2026-03-04 09:18:59,906 | INFO     | will attempt to kill all subprocesses of pid=652284
[2026-03-04 01:20:01] 2026-03-04 09:19:00,699 | INFO     | process IDs to be killed: [652284] (in reverse order)
[2026-03-04 01:20:01] 2026-03-04 09:19:01,098 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 01:20:01] 2026-03-04 09:19:01,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 01:20:01] 2026-03-04 09:19:01,131 | INFO     | did not find any defunct processes belonging to 652284
[2026-03-04 01:20:01] 2026-03-04 09:19:01,153 | INFO     | did not find any defunct processes belonging to 652284
[2026-03-04 01:20:01] 2026-03-04 09:19:01,154 | INFO     | ready for new job
[2026-03-04 01:20:01] 2026-03-04 09:19:01,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 01:20:01] 2026-03-04 09:19:01,162 | INFO     | **************************************
[2026-03-04 01:20:01] 2026-03-04 09:19:01,162 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 01:20:01] 2026-03-04 09:19:01,162 | INFO     | **************************************
[2026-03-04 01:20:01] 2026-03-04 09:19:01,162 | INFO     | 
[2026-03-04 01:20:01] 2026-03-04 09:19:01,165 | INFO     | architecture information:
[2026-03-04 01:20:01] 2026-03-04 09:19:01,173 | INFO     | executing command: cat /etc/os-release
[2026-03-04 01:20:01] 2026-03-04 09:19:01,255 | INFO     | cat /etc/os-release:
[2026-03-04 01:20:01] NAME="CentOS Linux"
[2026-03-04 01:20:01] VERSION="7 (Core)"
[2026-03-04 01:20:01] ID="centos"
[2026-03-04 01:20:01] ID_LIKE="rhel fedora"
[2026-03-04 01:20:01] VERSION_ID="7"
[2026-03-04 01:20:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 01:20:01] ANSI_COLOR="0;31"
[2026-03-04 01:20:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 01:20:01] HOME_URL="https://www.centos.org/"
[2026-03-04 01:20:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 01:20:01] 
[2026-03-04 01:20:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 01:20:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 01:20:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 01:20:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 01:20:01] 
[2026-03-04 01:20:01] 2026-03-04 09:19:01,255 | INFO     | **************************************
[2026-03-04 01:20:01] 2026-03-04 09:19:01,759 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-04 01:20:01] 2026-03-04 09:19:01,809 | INFO     | sufficient remaining disk space (2100602863616 B)
[2026-03-04 01:20:01] 2026-03-04 09:19:01,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 01:20:01] 2026-03-04 09:19:01,809 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 01:20:01] 2026-03-04 09:19:01,810 | INFO     | update_server=False
[2026-03-04 01:20:01] 2026-03-04 09:19:01,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 01:20:01] 2026-03-04 09:19:01,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 01:20:01] 2026-03-04 09:19:01,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 01:20:01] 2026-03-04 09:19:02,351 | INFO     | all job control threads have been joined
[2026-03-04 01:20:01] 2026-03-04 09:19:02,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:20:01] 2026-03-04 09:19:02,449 | INFO     | aborting loop
[2026-03-04 01:20:01] 2026-03-04 09:19:02,498 | INFO     | all payload control threads have been joined
[2026-03-04 01:20:01] 2026-03-04 09:19:02,632 | INFO     | all data control threads have been joined
[2026-03-04 01:20:01] 2026-03-04 09:19:02,815 | INFO     | [job] retrieve thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:02,937 | INFO     | [job] validate thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,035 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,356 | INFO     | [job] control thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,411 | INFO     | [data] copytool_in thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,412 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,447 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,458 | INFO     | [job] job monitor thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,504 | INFO     | [payload] control thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,638 | INFO     | [data] control thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,684 | INFO     | [payload] validate_post thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,723 | INFO     | [payload] failed_post thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:20:01] 2026-03-04 09:19:03,816 | INFO     | [data] copytool_out thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:03,958 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:04,811 | INFO     | [job] queue monitor thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:05,819 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 01:20:01] 2026-03-04 09:19:33,228 | INFO     | PID=647383 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-04 01:20:01] 2026-03-04 09:19:33,248 | INFO     | .. there are 35 such processes running
[2026-03-04 01:20:01] 2026-03-04 09:19:33,248 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 01:20:01] 2026-03-04 09:19:33,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 01:20:01] 2026-03-04 09:19:33,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 01:20:01] 2026-03-04 09:19:52,635 | INFO     | [monitor] cgroup control has ended
[2026-03-04 01:20:01] 2026-03-04 09:19:53,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408470587200)>', '<ExcThread(monitor, started 140407715395328)>']
[2026-03-04 01:20:01] 2026-03-04 09:19:54,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 01:20:01] 2026-03-04 09:19:54,374 | INFO     | [monitor] control thread has ended
[2026-03-04 01:20:01] 2026-03-04 09:19:59,012 | INFO     | all workflow threads have been joined
[2026-03-04 01:20:01] 2026-03-04 09:19:59,013 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 01:20:01] 2026-03-04 09:19:59,013 | INFO     | traces error code: 0
[2026-03-04 01:20:01] 2026-03-04 09:19:59,013 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 01:20:01] 2026-03-04 09:19:59,770 [wrapper] ==== pilot stdout END ====
[2026-03-04 01:20:01] 2026-03-04 09:19:59,794 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 01:20:01] 2026-03-04 09:19:59,821 [wrapper] pilotpid: 647383
[2026-03-04 01:20:01] 2026-03-04 09:19:59,850 [wrapper] Pilot exit status: 0
[2026-03-04 01:20:01] 2026-03-04 09:19:59,917 [wrapper] pandaids: 7037240686
[2026-03-04 01:20:01] 2026-03-04 09:20:00,136 [wrapper] cleanup supervisor_pilot  647389 647384
[2026-03-04 01:20:01] 2026-03-04 09:20:00,181 [wrapper] Test setup, not cleaning
[2026-03-04 01:20:01] 2026-03-04 09:20:00,231 [wrapper] apfmon messages muted
[2026-03-04 01:20:01] 2026-03-04 09:20:00,250 [wrapper] ==== wrapper stdout END ====
[2026-03-04 01:20:01] 2026-03-04 09:20:00,286 [wrapper] ==== wrapper stderr END ====
[2026-03-04 01:20:01]  *** Error codes and diagnostics ***
[2026-03-04 01:20:01]     "exeErrorCode": 65,
[2026-03-04 01:20:01]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 01:20:01]     "pilotErrorCode": 1305,
[2026-03-04 01:20:01]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-04 01:20:01]  *** Listing of results directory ***
[2026-03-04 01:20:01] total 258592
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc      5111 Mar  3 20:50 queuedata.json
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc    584627 Mar  3 20:50 pilot3.tar.gz
[2026-03-04 01:20:01] -rwx------. 1 boinc boinc     36322 Mar  3 20:51 runpilot2-wrapper.sh
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc       100 Mar  4 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 01:20:01] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 01:13 run_atlas
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc       105 Mar  4 01:13 job.xml
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc 260646248 Mar  4 01:13 EVNT.48564734._000007.pool.root.1
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc      6590 Mar  4 01:13 init_data.xml
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc     15845 Mar  4 01:13 start_atlas.sh
[2026-03-04 01:20:01] drwxrwx--x. 2 boinc boinc      4096 Mar  4 01:13 shared
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc    597942 Mar  4 01:13 input.tar.gz
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc         0 Mar  4 01:13 boinc_lockfile
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc      2541 Mar  4 01:13 pandaJob.out
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc    997384 Mar  4 01:14 agis_schedconf.cvmfs.json
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc   1516092 Mar  4 01:14 agis_ddmendpoints.agis.ALL.json
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc       444 Mar  4 01:14 workernode_map.json
[2026-03-04 01:20:01] drwx------. 5 boinc boinc      4096 Mar  4 01:14 pilot3
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc       524 Mar  4 01:16 boinc_task_state.xml
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc       951 Mar  4 01:16 memory_monitor_summary.json
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc     22346 Mar  4 01:17 log.48937795._000161.job.log.tgz.1
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc      7023 Mar  4 01:18 heartbeat.json
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc        95 Mar  4 01:19 pilot_heartbeat.json
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc      4818 Mar  4 01:19 pilotlog.txt
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc        23 Mar  4 01:19 wrapper_checkpoint.txt
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc      8192 Mar  4 01:19 boinc_mmap_file
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc     89652 Mar  4 01:20 log.48937795._000161.job.log.1
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc       188 Mar  4 01:20 output.list
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc       620 Mar  4 01:20 runtime_log
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc    133120 Mar  4 01:20 result.tar.gz
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc       645 Mar  4 01:20 ZEcLDmjNtH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzMJLDma1EAkn.diag
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc      8635 Mar  4 01:20 runtime_log.err
[2026-03-04 01:20:01] -rw-r--r--. 1 boinc boinc     21722 Mar  4 01:20 stderr.txt
[2026-03-04 01:20:01] No HITS result produced
[2026-03-04 01:20:01]  *** Contents of shared directory: ***
[2026-03-04 01:20:01] total 255272
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc 260646248 Mar  4 01:13 ATLAS.root_0
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc     15845 Mar  4 01:13 start_atlas.sh
[2026-03-04 01:20:01] -rw-r--r--. 2 boinc boinc    597942 Mar  4 01:13 input.tar.gz
[2026-03-04 01:20:01] -rw-------. 1 boinc boinc    133120 Mar  4 01:20 result.tar.gz
01:20:02 (643490): run_atlas exited; CPU time 30.195734
01:20:02 (643490): called boinc_finish(0)

</stderr_txt>
]]>

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