Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:10:10 (3296119): wrapper (7.7.26015): starting
06:10:10 (3296119): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 06:10:11] Arguments: --nthreads 4
[2026-03-05 06:10:11] Threads: 4
[2026-03-05 06:10:11] Checking for CVMFS
[2026-03-05 06:10:11] No cvmfs_config command found, will try listing directly
[2026-03-05 06:10:11] CVMFS is ok
[2026-03-05 06:10:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 06:10:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 06:10:11] Further information can be found at the LHC@home message board.
[2026-03-05 06:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 06:10:11] Checking for apptainer binary...
[2026-03-05 06:10:11] which: no apptainer in ((null))
[2026-03-05 06:10:11] apptainer is not installed, using version from CVMFS
[2026-03-05 06:10:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 06:10:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot204/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-03-05 06:10:11] apptainer works
[2026-03-05 06:10:11] Set ATHENA_PROC_NUMBER=4
[2026-03-05 06:10:11] Set ATHENA_CORE_NUMBER=4
[2026-03-05 06:10:11] Starting ATLAS job with PandaID=7036809602
[2026-03-05 06:10:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot204/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 07:45:44]  *** The last 200 lines of the pilot log: ***
[2026-03-05 07:45:44]  is_tar=False
[2026-03-05 07:45:44]  lfn=log.48868979._001469.job.log.tgz.1
[2026-03-05 07:45:44]  mtime=0
[2026-03-05 07:45:44]  protocol_id=None
[2026-03-05 07:45:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 07:45:44]  replicas=None
[2026-03-05 07:45:44]  scope=mc23_13p6TeV
[2026-03-05 07:45:44]  status=None
[2026-03-05 07:45:44]  status_code=0
[2026-03-05 07:45:44]  storage_token=
[2026-03-05 07:45:44]  surl=/var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7036809602/log.48868979._001469.job.log.tgz.1
[2026-03-05 07:45:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/ee/log.48868979._001469.job.log.tgz.1
[2026-03-05 07:45:44]  workdir=None
[2026-03-05 07:45:44] ]
[2026-03-05 07:45:44] 2026-03-05 06:44:32,993 | INFO     | transferring file log.48868979._001469.job.log.tgz.1 from /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7036809602/log.48868979._001469.job.log.tgz.1 to /var/lib/
[2026-03-05 07:45:44] 2026-03-05 06:44:32,993 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7036809602/log.48868979._001469.job.log.tgz.1 /var/lib/boinc/var/slot204/slots/0/
[2026-03-05 07:45:44] 2026-03-05 06:44:33,011 | INFO     | adding to output.list: log.48868979._001469.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/74/ee/log.48868979._001469.job.log.tg
[2026-03-05 07:45:44] 2026-03-05 06:44:33,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 07:45:44] 2026-03-05 06:44:33,012 | INFO     | summary of transferred files:
[2026-03-05 07:45:44] 2026-03-05 06:44:33,012 | INFO     |  -- lfn=log.48868979._001469.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 07:45:44] 2026-03-05 06:44:33,012 | INFO     | stage-out finished correctly
[2026-03-05 07:45:44] 2026-03-05 06:44:33,210 | INFO     | monitor loop #397: job 0:7036809602 is in state 'finished'
[2026-03-05 07:45:44] 2026-03-05 06:44:33,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 07:45:44] 2026-03-05 06:44:33,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 07:45:44] 2026-03-05 06:44:34,646 | INFO     | time since job start (5645s) is within the limit (349056.0s)
[2026-03-05 07:45:44] 2026-03-05 06:44:35,601 | INFO     | job 7036809602 has state=finished
[2026-03-05 07:45:44] 2026-03-05 06:44:35,601 | INFO     | preparing for final server update for job 7036809602 in state='finished'
[2026-03-05 07:45:44] 2026-03-05 06:44:35,713 | INFO     | monitor loop #398: job 0:7036809602 is in state 'finished'
[2026-03-05 07:45:44] 2026-03-05 06:44:35,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,178 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,178 | INFO     | reading metadata from: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7036809602/jobReport.json
[2026-03-05 07:45:44] 2026-03-05 06:44:36,179 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot204/slots/0/workernode_map.json
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | INFO     | this job has now completed (state=finished)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | INFO     | log transfer has been attempted: DONE
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | INFO     | job 7036809602 has finished - writing final server update
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_59960/.job.ad'
[2026-03-05 07:45:44] 2026-03-05 06:44:36,180 | INFO     | total number of processed events: 400 (read)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | INFO     | using path: /var/lib/boinc/var/slot204/slots/0/PanDA_Pilot-7036809602/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | INFO     | extracted standard info from prmon json
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 07:45:44] 2026-03-05 06:44:36,199 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | fitting pss+swap vs Time
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | sum of square deviations: 190403570.0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | sum of deviations: 1191920297.0000002
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | mean x: 1772690324.0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | mean y: 2335248.6588235293
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | intersect: -11094649841.857634
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | chi2: 0.0006263826990504905
[2026-03-05 07:45:44] 2026-03-05 06:44:36,200 | INFO     | current memory leak: 6.26 B/s (using 85 data points, chi2=0.00)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | could have reported an average CPU frequency of 3565 MHz (7 samples)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | ..............................
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . Timing measurements:
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . get job = 0 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . initial setup = 7 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . payload setup = 9 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . stage-in = 0 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . payload execution = 5618 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . stage-out = 0 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | . log creation = 0 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,201 | INFO     | ..............................
[2026-03-05 07:45:44] 2026-03-05 06:44:36,275 | INFO     | 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | job summary report
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | --------------------------------------------------
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | PanDA job id: 7036809602
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | task id: 48868979
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | errors: (none)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | pilot state: finished 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | transexitcode: 0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | exeerrorcode: 0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | exeerrordiag: 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | exitcode: 0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | exitmsg: OK
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | cpuconsumptiontime: 21177 s
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | nevents: 400
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | neventsw: 0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | pid: 3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | pgrp: 3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | corecount: 4
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | event service: False
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | sizes: {0: 2295320, 1: 2295837, 11: 2295837, 5631: 2322546, 5633: 2331624, 5636: 2331762}
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | --------------------------------------------------
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,276 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot204/slots/0
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | job 7036809602 has completed (purged errors)
[2026-03-05 07:45:44] 2026-03-05 06:44:36,293 | INFO     | overall cleanup function is called
[2026-03-05 07:45:44] 2026-03-05 06:44:36,325 | INFO     | PID=3301540 has CPU usage=14.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-05 07:45:44] 2026-03-05 06:44:36,325 | INFO     | .. there are 50 such processes running
[2026-03-05 07:45:44] 2026-03-05 06:44:37,301 | INFO     | --- collectZombieJob: --- 10, [3308182]
[2026-03-05 07:45:44] 2026-03-05 06:44:37,302 | INFO     | zombie collector waiting for pid 3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:37,302 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 07:45:44] 2026-03-05 06:44:37,302 | INFO     | collected zombie processes
[2026-03-05 07:45:44] 2026-03-05 06:44:37,302 | INFO     | will attempt to kill all subprocesses of pid=3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:37,817 | INFO     | process IDs to be killed: [3308182] (in reverse order)
[2026-03-05 07:45:44] 2026-03-05 06:44:38,150 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 07:45:44] 2026-03-05 06:44:38,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 07:45:44] 2026-03-05 06:44:38,184 | INFO     | did not find any defunct processes belonging to 3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:38,217 | INFO     | did not find any defunct processes belonging to 3308182
[2026-03-05 07:45:44] 2026-03-05 06:44:38,217 | INFO     | ready for new job
[2026-03-05 07:45:44] 2026-03-05 06:44:38,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 07:45:44] 2026-03-05 06:44:38,219 | INFO     | **************************************
[2026-03-05 07:45:44] 2026-03-05 06:44:38,219 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 07:45:44] 2026-03-05 06:44:38,219 | INFO     | **************************************
[2026-03-05 07:45:44] 2026-03-05 06:44:38,219 | INFO     | 
[2026-03-05 07:45:44] 2026-03-05 06:44:38,227 | INFO     | architecture information:
[2026-03-05 07:45:44] 2026-03-05 06:44:38,227 | INFO     | executing command: cat /etc/os-release
[2026-03-05 07:45:44] 2026-03-05 06:44:38,241 | INFO     | cat /etc/os-release:
[2026-03-05 07:45:44] NAME="CentOS Linux"
[2026-03-05 07:45:44] VERSION="7 (Core)"
[2026-03-05 07:45:44] ID="centos"
[2026-03-05 07:45:44] ID_LIKE="rhel fedora"
[2026-03-05 07:45:44] VERSION_ID="7"
[2026-03-05 07:45:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 07:45:44] ANSI_COLOR="0;31"
[2026-03-05 07:45:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 07:45:44] HOME_URL="https://www.centos.org/"
[2026-03-05 07:45:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 07:45:44] 
[2026-03-05 07:45:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 07:45:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 07:45:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 07:45:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 07:45:44] 
[2026-03-05 07:45:44] 2026-03-05 06:44:38,241 | INFO     | **************************************
[2026-03-05 07:45:44] 2026-03-05 06:44:38,744 | INFO     | executing command: df -mP /var/lib/boinc/var/slot204/slots/0
[2026-03-05 07:45:44] 2026-03-05 06:44:38,758 | INFO     | sufficient remaining disk space (20790116352 B)
[2026-03-05 07:45:44] 2026-03-05 06:44:38,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 07:45:44] 2026-03-05 06:44:38,758 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 07:45:44] 2026-03-05 06:44:38,758 | INFO     | update_server=False
[2026-03-05 07:45:44] 2026-03-05 06:44:38,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 07:45:44] 2026-03-05 06:44:38,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 07:45:44] 2026-03-05 06:44:39,028 | INFO     | all payload control threads have been joined
[2026-03-05 07:45:44] 2026-03-05 06:44:39,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:45:44] 2026-03-05 06:44:39,223 | INFO     | aborting loop
[2026-03-05 07:45:44] 2026-03-05 06:44:39,343 | INFO     | all data control threads have been joined
[2026-03-05 07:45:44] 2026-03-05 06:44:39,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 07:45:44] 2026-03-05 06:44:39,432 | INFO     | all job control threads have been joined
[2026-03-05 07:45:44] 2026-03-05 06:44:39,763 | INFO     | [job] retrieve thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,016 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,034 | INFO     | [payload] control thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,228 | INFO     | [job] job monitor thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,348 | INFO     | [data] control thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,437 | INFO     | [job] control thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,568 | INFO     | [payload] failed_post thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,575 | INFO     | [payload] validate_post thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,619 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,700 | INFO     | [job] validate thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,711 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:40,765 | INFO     | [data] copytool_out thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:41,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:45:44] 2026-03-05 06:44:41,245 | INFO     | [data] copytool_in thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:42,250 | INFO     | [job] queue monitor thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:44:43,385 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 07:45:44] 2026-03-05 06:45:08,996 | INFO     | PID=3301540 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 07:45:44] 2026-03-05 06:45:08,997 | INFO     | .. there are 49 such processes running
[2026-03-05 07:45:44] 2026-03-05 06:45:08,997 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 07:45:44] 2026-03-05 06:45:08,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 07:45:44] 2026-03-05 06:45:08,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 07:45:44] 2026-03-05 06:45:38,776 | INFO     | [monitor] cgroup control has ended
[2026-03-05 07:45:44] 2026-03-05 06:45:39,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23207751571264)>', '<ExcThread(monitor, started 23207442622208)>']
[2026-03-05 07:45:44] 2026-03-05 06:45:40,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 07:45:44] 2026-03-05 06:45:40,152 | INFO     | [monitor] control thread has ended
[2026-03-05 07:45:44] 2026-03-05 06:45:44,320 | INFO     | all workflow threads have been joined
[2026-03-05 07:45:44] 2026-03-05 06:45:44,324 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 07:45:44] 2026-03-05 06:45:44,324 | INFO     | traces error code: 0
[2026-03-05 07:45:44] 2026-03-05 06:45:44,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 07:45:44] 2026-03-05 06:45:44,460 [wrapper] ==== pilot stdout END ====
[2026-03-05 07:45:44] 2026-03-05 06:45:44,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 07:45:44] 2026-03-05 06:45:44,466 [wrapper] pilotpid: 3301540
[2026-03-05 07:45:44] 2026-03-05 06:45:44,468 [wrapper] Pilot exit status: 0
[2026-03-05 07:45:44] 2026-03-05 06:45:44,478 [wrapper] pandaids: 7036809602
[2026-03-05 07:45:44] 2026-03-05 06:45:44,613 [wrapper] cleanup supervisor_pilot 4009477 3301541
[2026-03-05 07:45:44] 2026-03-05 06:45:44,619 [wrapper] Test setup, not cleaning
[2026-03-05 07:45:44] 2026-03-05 06:45:44,621 [wrapper] apfmon messages muted
[2026-03-05 07:45:44] 2026-03-05 06:45:44,623 [wrapper] ==== wrapper stdout END ====
[2026-03-05 07:45:44] 2026-03-05 06:45:44,624 [wrapper] ==== wrapper stderr END ====
[2026-03-05 07:45:44]  *** Error codes and diagnostics ***
[2026-03-05 07:45:44]     "exeErrorCode": 0,
[2026-03-05 07:45:44]     "exeErrorDiag": "",
[2026-03-05 07:45:44]     "pilotErrorCode": 0,
[2026-03-05 07:45:44]     "pilotErrorDiag": "",
[2026-03-05 07:45:44]  *** Listing of results directory ***
[2026-03-05 07:45:44] total 493624
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc    584627 Mar  4 00:05 pilot3.tar.gz
[2026-03-05 07:45:44] -rwx------. 1 boinc boinc     36322 Mar  4 00:21 runpilot2-wrapper.sh
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc      5111 Mar  4 00:21 queuedata.json
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc       100 Mar  5 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 07:45:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 06:10 run_atlas
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc       105 Mar  5 06:10 job.xml
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc 291380051 Mar  5 06:10 EVNT.48717036._000059.pool.root.1
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc     15845 Mar  5 06:10 start_atlas.sh
[2026-03-05 07:45:44] drwxrwx--x. 2 boinc boinc      4096 Mar  5 06:10 shared
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc    597962 Mar  5 06:10 input.tar.gz
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc      6707 Mar  5 06:10 init_data.xml
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc         0 Mar  5 06:10 boinc_lockfile
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc      2596 Mar  5 06:10 pandaJob.out
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc    997749 Mar  5 06:10 agis_schedconf.cvmfs.json
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc   1521291 Mar  5 06:10 agis_ddmendpoints.agis.ALL.json
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc       445 Mar  5 06:10 workernode_map.json
[2026-03-05 07:45:44] drwx------. 5 boinc boinc      4096 Mar  5 06:10 pilot3
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc 207940338 Mar  5 07:44 HITS.48868979._001469.pool.root.1
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc       529 Mar  5 07:44 boinc_task_state.xml
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc      1030 Mar  5 07:44 memory_monitor_summary.json
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc    288070 Mar  5 07:44 log.48868979._001469.job.log.tgz.1
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc      6352 Mar  5 07:44 heartbeat.json
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc        95 Mar  5 07:45 pilot_heartbeat.json
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc      8192 Mar  5 07:45 boinc_mmap_file
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc        27 Mar  5 07:45 wrapper_checkpoint.txt
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc      4830 Mar  5 07:45 pilotlog.txt
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc    817014 Mar  5 07:45 log.48868979._001469.job.log.1
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc       357 Mar  5 07:45 output.list
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc       620 Mar  5 07:45 runtime_log
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc   1126400 Mar  5 07:45 result.tar.gz
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc       662 Mar  5 07:45 wGFMDmnEoH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvRGLDmPEI26m.diag
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc      9221 Mar  5 07:45 runtime_log.err
[2026-03-05 07:45:44] -rw-r--r--. 1 boinc boinc     21539 Mar  5 07:45 stderr.txt
[2026-03-05 07:45:44] HITS file was successfully produced:
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc 207940338 Mar  5 07:44 shared/HITS.pool.root.1
[2026-03-05 07:45:44]  *** Contents of shared directory: ***
[2026-03-05 07:45:44] total 489328
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc 291380051 Mar  5 06:10 ATLAS.root_0
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc     15845 Mar  5 06:10 start_atlas.sh
[2026-03-05 07:45:44] -rw-r--r--. 2 boinc boinc    597962 Mar  5 06:10 input.tar.gz
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc 207940338 Mar  5 07:44 HITS.pool.root.1
[2026-03-05 07:45:44] -rw-------. 1 boinc boinc   1126400 Mar  5 07:45 result.tar.gz
07:45:46 (3296119): run_atlas exited; CPU time 21432.013168
07:45:46 (3296119): called boinc_finish(0)

</stderr_txt>
]]>

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