Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-03 22:10:39 (8212): vboxwrapper version 26210
2026-03-03 22:10:39 (8212): BOINC client version: 8.2.4
2026-03-03 22:10:39 (8212): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-03-03 22:10:40 (8212): Successfully copied 'init_data.xml' to the shared directory.
2026-03-03 22:10:40 (8212): Create VM. (boinc_b0723af533976baf, slot#0)
2026-03-03 22:10:40 (8212): Setting Memory Size for VM. (4400MB)
2026-03-03 22:10:41 (8212): Setting CPU Count for VM. (4)
2026-03-03 22:10:41 (8212): Setting Chipset Options for VM.
2026-03-03 22:10:41 (8212): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-03 22:10:41 (8212): Setting Boot Options for VM.
2026-03-03 22:10:42 (8212): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-03 22:10:42 (8212): Enabling VM Network Access.
2026-03-03 22:10:42 (8212): Disabling USB Support for VM.
2026-03-03 22:10:43 (8212): Disabling COM Port Support for VM.
2026-03-03 22:10:43 (8212): Disabling LPT Port Support for VM.
2026-03-03 22:10:43 (8212): Disabling Audio Support for VM.
2026-03-03 22:10:43 (8212): Disabling Clipboard Support for VM.
2026-03-03 22:10:44 (8212): Disabling Drag and Drop Support for VM.
2026-03-03 22:10:44 (8212): Adding storage controller(s) to VM.
2026-03-03 22:10:44 (8212): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-03 22:10:45 (8212): Adding VirtualBox Guest Additions to VM.
2026-03-03 22:10:45 (8212): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-03 22:10:45 (8212): forwarding host port 60676 to guest port 80
2026-03-03 22:10:45 (8212): Enabling remote desktop for VM.
2026-03-03 22:10:46 (8212): Required extension pack not installed, remote desktop not enabled.
2026-03-03 22:10:46 (8212): Enabling shared directory for VM.
2026-03-03 22:10:46 (8212): Starting VM using VBoxManage interface. (boinc_b0723af533976baf, slot#0)
2026-03-03 22:10:51 (8212): Successfully started VM. (PID = '8364')
2026-03-03 22:10:51 (8212): Reporting VM Process ID to BOINC.
2026-03-03 22:10:51 (8212): Guest Log: BIOS: VirtualBox 7.2.4
2026-03-03 22:10:51 (8212): Guest Log: CPUID EDX: 0x178bfbff
2026-03-03 22:10:51 (8212): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-03 22:10:51 (8212): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-03 22:10:51 (8212): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-03 22:10:51 (8212): Detected: Web Application Enabled (http://localhost:60676)
2026-03-03 22:10:51 (8212): Preference change detected
2026-03-03 22:10:51 (8212): Setting CPU throttle for VM. (60%)
2026-03-03 22:10:51 (8212): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-03 22:10:53 (8212): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-03 22:10:53 (8212): Guest Log: BIOS: Booting from Hard Disk...
2026-03-03 22:10:56 (8212): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-03 22:10:56 (8212): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-03 22:10:56 (8212): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-03 22:11:10 (8212): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-03 22:11:10 (8212): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-03 22:11:25 (8212): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000179 main     Log opened 2026-03-03T22:11:23.083200000Z
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000334 main     OS Product: Linux
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000375 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000412 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000446 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000447 main     Process ID: 1305
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.000448 main     Package type: LINUX_64BITS_GENERIC
2026-03-03 22:11:25 (8212): Guest Log: 00:00:00.004479 main     5.2.32 r132073 started. Verbose level = 0
2026-03-03 22:11:25 (8212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-03 22:11:25 (8212): Guest Log: [INFO] Mounting shared directory
2026-03-03 22:11:25 (8212): Guest Log: [INFO] Checking for init_data.xml
2026-03-03 22:11:30 (8212): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-03 22:11:30 (8212): Guest Log: [INFO] Detected branch: prod
2026-03-03 22:11:30 (8212): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-03 22:11:30 (8212): Guest Log: Copying input files
2026-03-03 22:11:33 (8212): Guest Log: Copied input files into RunAtlas.
2026-03-03 22:11:33 (8212): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-03 22:11:33 (8212): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-03 22:11:33 (8212): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-03 22:11:33 (8212): Guest Log: Further information can be found at the LHC@home message board.
2026-03-03 22:11:35 (8212): Guest Log: 00:00:10.010238 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 704 956 000ns (GuestNow=1 772 593 894 796 586 000 ns GuestLast=1 772 575 883 091 630 000 ns fSetTimeLastLoop=true )
2026-03-03 22:12:28 (8212): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-03 22:12:29 (8212): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-03 22:12:29 (8212): Guest Log: 2.6.3.0 1583 1 30140 156866 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-03 22:12:31 (8212): Guest Log: copied the webapp to /var/www
2026-03-03 22:12:31 (8212): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-03 22:12:31 (8212): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-03 22:12:31 (8212): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-03 22:12:31 (8212): Guest Log:  *** Starting ATLAS job. (PandaID=7036809152 taskID=48868979) ***
2026-03-03 23:50:55 (8212): Status Report: Elapsed Time: '6000.000000'
2026-03-03 23:50:55 (8212): Status Report: CPU Time: '10962.390625'
2026-03-04 01:31:00 (8212): Status Report: Elapsed Time: '12000.000000'
2026-03-04 01:31:00 (8212): Status Report: CPU Time: '23419.234375'
2026-03-04 03:11:04 (8212): Status Report: Elapsed Time: '18000.000000'
2026-03-04 03:11:04 (8212): Status Report: CPU Time: '35518.828125'
2026-03-04 04:46:21 (8212): Guest Log:  *** Job finished ***
2026-03-04 04:46:21 (8212): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,519 | INFO     | PID=5999 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,519 | INFO     | found 0 job(s) in 20 queues
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,519 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:13,520 | INFO     | [monitor] control thread has ended
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,272 | INFO     | all workflow threads have been joined
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,272 | INFO     | end of generic workflow (traces error code: 0)
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,272 | INFO     | traces error code: 0
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,429 [wrapper] ==== pilot stdout END ====
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,449 [wrapper] ==== wrapper stdout RESUME ====
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,454 [wrapper] pilotpid: 5999
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,459 [wrapper] Pilot exit status: 0
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,620 [wrapper] pandaids: 7036809152
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,720 [wrapper] cleanup supervisor_pilot 31358 6000
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,765 [wrapper] Test setup, not cleaning
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,779 [wrapper] apfmon messages muted
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,838 [wrapper] ==== wrapper stdout END ====
2026-03-04 04:46:21 (8212): Guest Log: 2026-03-04 09:46:18,870 [wrapper] ==== wrapper stderr END ====
2026-03-04 04:46:21 (8212): Guest Log:  *** Error codes and diagnostics ***
2026-03-04 04:46:21 (8212): Guest Log:     "exeErrorCode": 0,
2026-03-04 04:46:21 (8212): Guest Log:     "exeErrorDiag": "",
2026-03-04 04:46:21 (8212): Guest Log:     "pilotErrorCode": 0,
2026-03-04 04:46:21 (8212): Guest Log:     "pilotErrorDiag": "",
2026-03-04 04:46:21 (8212): Guest Log:  *** Listing of results directory ***
2026-03-04 04:46:21 (8212): Guest Log: total 222328
2026-03-04 04:46:21 (8212): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  3 23:05 pilot3.tar.gz
2026-03-04 04:46:21 (8212): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  3 23:13 queuedata.json
2026-03-04 04:46:21 (8212): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  3 23:13 runpilot2-wrapper.sh
2026-03-04 04:46:21 (8212): Guest Log: -rwxr-xr-x. 1 atlas atlas     10504 Mar  4 03:11 init_data.xml
2026-03-04 04:46:21 (8212): Guest Log: -rwxr-xr-x. 1 atlas atlas    597957 Mar  4 03:11 input.tar.gz
2026-03-04 04:46:21 (8212): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  4 03:11 start_atlas.sh
2026-03-04 04:46:21 (8212): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  4 03:11 EVNT.48717036._000052.pool.root.1 -> /data/./ATLAS.root_0
2026-03-04 04:46:21 (8212): Guest Log: -rw-r--r--. 1 atlas atlas      2596 Mar  4 03:12 pandaJob.out
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas    998484 Mar  4 03:13 agis_schedconf.cvmfs.json
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas       424 Mar  4 03:13 workernode_map.json
2026-03-04 04:46:21 (8212): Guest Log: drwx------. 5 atlas atlas      4096 Mar  4 03:13 pilot3
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas 216444683 Mar  4 09:44 HITS.48868979._001299.pool.root.1
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas      1025 Mar  4 09:45 memory_monitor_summary.json
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas        95 Mar  4 09:45 pilot_heartbeat.json
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas   1516092 Mar  4 09:45 agis_ddmendpoints.agis.ALL.json
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas    535955 Mar  4 09:45 log.48868979._001299.job.log.tgz.1
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas      6355 Mar  4 09:45 heartbeat.json
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  4 09:46 pilotlog.txt
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas   3142589 Mar  4 09:46 log.48868979._001299.job.log.1
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 09:46 output.list
2026-03-04 04:46:21 (8212): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 09:46 runtime_log
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas   3696640 Mar  4 09:46 result.tar.gz
2026-03-04 04:46:21 (8212): Guest Log: -rw-r--r--. 1 atlas atlas      8713 Mar  4 09:46 runtime_log.err
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas       646 Mar  4 09:46 9icKDmH7nH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwMILDm7lXtOm.diag
2026-03-04 04:46:21 (8212): Guest Log: Looking for outputfile HITS.48868979._001299.pool.root.1
2026-03-04 04:46:21 (8212): Guest Log: HITS file was successfully produced
2026-03-04 04:46:21 (8212): Guest Log: -rw-------. 1 atlas atlas 216444683 Mar  4 09:44 /home/atlas/RunAtlas/HITS.48868979._001299.pool.root.1
2026-03-04 04:46:24 (8212): Guest Log: Successfully finished the ATLAS job!
2026-03-04 04:46:24 (8212): Guest Log: Copying the results back to the shared directory!
2026-03-04 04:46:24 (8212): Guest Log:  *** Contents of shared directory: ***
2026-03-04 04:46:24 (8212): Guest Log: total 502520
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root 293808246 Mar  4 03:10 ATLAS.root_0
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root 216444683 Mar  4 09:46 HITS.pool.root.1
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root     10504 Mar  4 03:10 init_data.xml
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root    597957 Mar  4 03:10 input.tar.gz
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root   3696640 Mar  4 09:46 result.tar.gz
2026-03-04 04:46:24 (8212): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  4 03:10 start_atlas.sh
2026-03-04 04:46:24 (8212): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-04 04:46:24 (8212): VM Completion File Detected.
2026-03-04 04:46:24 (8212): Powering off VM.
2026-03-04 04:46:24 (8212): Successfully stopped VM.
2026-03-04 04:46:24 (8212): Deregistering VM. (boinc_b0723af533976baf, slot#0)
2026-03-04 04:46:24 (8212): Removing network bandwidth throttle group from VM.
2026-03-04 04:46:25 (8212): Removing VM from VirtualBox.
2026-03-04 04:46:30 (8212): called boinc_finish(0)

</stderr_txt>
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