Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-04 11:37:03 (95477): vboxwrapper version 26210
2026-03-04 11:37:03 (95477): BOINC client version: 8.2.5
2026-03-04 11:37:03 (95477): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2026-03-04 11:37:03 (95477): Detected: Sandbox Configuration Enabled
2026-03-04 11:37:03 (95477): Successfully copied 'init_data.xml' to the shared directory.
2026-03-04 11:37:03 (95477): Create VM. (boinc_75125f3ac0296195, slot#11)
2026-03-04 11:37:04 (95477): Setting Memory Size for VM. (4800MB)
2026-03-04 11:37:04 (95477): Setting CPU Count for VM. (8)
2026-03-04 11:37:04 (95477): Setting Chipset Options for VM.
2026-03-04 11:37:04 (95477): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-04 11:37:04 (95477): Setting Boot Options for VM.
2026-03-04 11:37:04 (95477): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-04 11:37:05 (95477): Enabling VM Network Access.
2026-03-04 11:37:05 (95477): Disabling USB Support for VM.
2026-03-04 11:37:05 (95477): Disabling COM Port Support for VM.
2026-03-04 11:37:05 (95477): Disabling Audio Support for VM.
2026-03-04 11:37:05 (95477): Disabling Clipboard Support for VM.
2026-03-04 11:37:05 (95477): Disabling Drag and Drop Support for VM.
2026-03-04 11:37:05 (95477): Adding storage controller(s) to VM.
2026-03-04 11:37:06 (95477): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-04 11:37:07 (95477): Adding VirtualBox Guest Additions to VM.
2026-03-04 11:37:07 (95477): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-04 11:37:07 (95477): forwarding host port 60691 to guest port 80
2026-03-04 11:37:07 (95477): Enabling remote desktop for VM.
2026-03-04 11:37:07 (95477): Required extension pack not installed, remote desktop not enabled.
2026-03-04 11:37:07 (95477): Enabling shared directory for VM.
2026-03-04 11:37:08 (95477): Starting VM using VBoxManage interface. (boinc_75125f3ac0296195, slot#11)
2026-03-04 11:37:12 (95477): Successfully started VM. (PID = '95549')
2026-03-04 11:37:12 (95477): Reporting VM Process ID to BOINC.
2026-03-04 11:37:12 (95477): Guest Log: BIOS: VirtualBox 7.0.20
2026-03-04 11:37:12 (95477): Guest Log: CPUID EDX: 0x178bfbff
2026-03-04 11:37:12 (95477): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-04 11:37:12 (95477): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-04 11:37:12 (95477): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-04 11:37:12 (95477): Detected: Web Application Enabled (http://localhost:60691)
2026-03-04 11:37:13 (95477): VM state change detected. (old = 'running', new = 'paused')
2026-03-04 11:37:30 (95477): Preference change detected
2026-03-04 11:37:30 (95477): Setting CPU throttle for VM. (100%)
2026-03-04 11:37:30 (95477): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-04 11:37:30 (95477): VM state change detected. (old = 'paused', new = 'running')
2026-03-04 11:37:31 (95477): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-04 11:37:31 (95477): Guest Log: BIOS: Booting from Hard Disk...
2026-03-04 11:37:37 (95477): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-04 11:37:37 (95477): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-04 11:37:37 (95477): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-04 11:37:44 (95477): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-04 11:37:44 (95477): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-04 11:37:56 (95477): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000275 main     Log opened 2026-03-04T02:37:37.871500000Z
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000483 main     OS Product: Linux
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000564 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000642 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000718 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000719 main     Process ID: 1371
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.000720 main     Package type: LINUX_64BITS_GENERIC
2026-03-04 11:37:56 (95477): Guest Log: 00:00:00.004449 main     5.2.32 r132073 started. Verbose level = 0
2026-03-04 11:37:56 (95477): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-04 11:37:56 (95477): Guest Log: [INFO] Mounting shared directory
2026-03-04 11:37:56 (95477): Guest Log: [INFO] Checking for init_data.xml
2026-03-04 11:38:01 (95477): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-04 11:38:01 (95477): Guest Log: [INFO] Detected branch: prod
2026-03-04 11:38:01 (95477): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-04 11:38:01 (95477): Guest Log: Copying input files
2026-03-04 11:38:07 (95477): Guest Log: Copied input files into RunAtlas.
2026-03-04 11:38:07 (95477): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-04 11:38:07 (95477): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-04 11:38:07 (95477): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-04 11:38:07 (95477): Guest Log: Further information can be found at the LHC@home message board.
2026-03-04 11:38:18 (95477): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-04 11:38:18 (95477): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-04 11:38:18 (95477): Guest Log: 2.6.3.0 1649 0 30184 156865 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-04 11:38:20 (95477): Guest Log: copied the webapp to /var/www
2026-03-04 11:38:20 (95477): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-04 11:38:20 (95477): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-04 11:38:20 (95477): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-04 11:38:20 (95477): Guest Log:  *** Starting ATLAS job. (PandaID=7036889032 taskID=48838581) ***
2026-03-04 13:17:29 (95477): Status Report: Elapsed Time: '6000.000000'
2026-03-04 13:17:29 (95477): Status Report: CPU Time: '36160.900000'
2026-03-04 14:57:29 (95477): Status Report: Elapsed Time: '12000.000000'
2026-03-04 14:57:29 (95477): Status Report: CPU Time: '75370.760000'
2026-03-04 15:49:58 (95477): Guest Log:  *** Job finished ***
2026-03-04 15:49:58 (95477): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:41,978 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:41,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:51,757 | INFO     | [monitor] cgroup control has ended
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:51,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680942913344)>', '<ExcThread(monitor, started 139680481781504)>']
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:52,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:52,007 | INFO     | [monitor] control thread has ended
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:56,786 | INFO     | all workflow threads have been joined
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:56,787 | INFO     | end of generic workflow (traces error code: 0)
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:56,787 | INFO     | traces error code: 0
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:56,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:56,991 [wrapper] ==== pilot stdout END ====
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,020 [wrapper] ==== wrapper stdout RESUME ====
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,039 [wrapper] pilotpid: 6074
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,057 [wrapper] Pilot exit status: 0
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,169 [wrapper] pandaids: 7036889032
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,292 [wrapper] cleanup supervisor_pilot 28622 6075
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,314 [wrapper] Test setup, not cleaning
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,341 [wrapper] apfmon messages muted
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,367 [wrapper] ==== wrapper stdout END ====
2026-03-04 15:49:58 (95477): Guest Log: 2026-03-04 06:49:57,389 [wrapper] ==== wrapper stderr END ====
2026-03-04 15:49:58 (95477): Guest Log:  *** Error codes and diagnostics ***
2026-03-04 15:49:59 (95477): Guest Log:     "exeErrorCode": 0,
2026-03-04 15:49:59 (95477): Guest Log:     "exeErrorDiag": "",
2026-03-04 15:49:59 (95477): Guest Log:     "pilotErrorCode": 0,
2026-03-04 15:49:59 (95477): Guest Log:     "pilotErrorDiag": "",
2026-03-04 15:49:59 (95477): Guest Log:  *** Listing of results directory ***
2026-03-04 15:49:59 (95477): Guest Log: total 236032
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 00:25 queuedata.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 00:25 pilot3.tar.gz
2026-03-04 15:49:59 (95477): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 00:25 runpilot2-wrapper.sh
2026-03-04 15:49:59 (95477): Guest Log: -rw-r-----. 1 atlas atlas     15845 Mar  4 02:37 start_atlas.sh
2026-03-04 15:49:59 (95477): Guest Log: -rw-r-----. 1 atlas atlas    597976 Mar  4 02:37 input.tar.gz
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas      7403 Mar  4 02:37 init_data.xml
2026-03-04 15:49:59 (95477): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  4 02:37 EVNT.48220205._000151.pool.root.1 -> /data/./ATLAS.root_0
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas      2588 Mar  4 02:38 pandaJob.out
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas    998484 Mar  4 02:39 agis_schedconf.cvmfs.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas       438 Mar  4 02:39 workernode_map.json
2026-03-04 15:49:59 (95477): Guest Log: drwx------. 5 atlas atlas      4096 Mar  4 02:39 pilot3
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas 232959890 Mar  4 06:48 HITS.48838581._006443.pool.root.1
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas      1034 Mar  4 06:48 memory_monitor_summary.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas        95 Mar  4 06:49 pilot_heartbeat.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas   1516092 Mar  4 06:49 agis_ddmendpoints.agis.ALL.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas    472623 Mar  4 06:49 log.48838581._006443.job.log.tgz.1
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas      6398 Mar  4 06:49 heartbeat.json
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  4 06:49 pilotlog.txt
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas   1968059 Mar  4 06:49 log.48838581._006443.job.log.1
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 06:49 output.list
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 06:49 runtime_log
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas   2457600 Mar  4 06:49 result.tar.gz
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Mar  4 06:49 runtime_log.err
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas       663 Mar  4 06:49 qPeKDmYEpH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwTGLDmgOI4wm.diag
2026-03-04 15:49:59 (95477): Guest Log: Looking for outputfile HITS.48838581._006443.pool.root.1
2026-03-04 15:49:59 (95477): Guest Log: HITS file was successfully produced
2026-03-04 15:49:59 (95477): Guest Log: -rw-------. 1 atlas atlas 232959890 Mar  4 06:48 /home/atlas/RunAtlas/HITS.48838581._006443.pool.root.1
2026-03-04 15:49:59 (95477): Guest Log: Successfully finished the ATLAS job!
2026-03-04 15:49:59 (95477): Guest Log: Copying the results back to the shared directory!
2026-03-04 15:49:59 (95477): Guest Log:  *** Contents of shared directory: ***
2026-03-04 15:49:59 (95477): Guest Log: total 284116
2026-03-04 15:49:59 (95477): Guest Log: -rw-rw----. 1 root root 287852650 Mar  4 02:37 ATLAS.root_0
2026-03-04 15:49:59 (95477): Guest Log: -rw-rw-r--. 1 root root      7403 Mar  4 02:37 init_data.xml
2026-03-04 15:49:59 (95477): Guest Log: -rw-rw----. 1 root root    597976 Mar  4 02:37 input.tar.gz
2026-03-04 15:49:59 (95477): Guest Log: -rw-r--r--. 1 root root   2457600 Mar  4 06:49 result.tar.gz
2026-03-04 15:49:59 (95477): Guest Log: -rw-rw----. 1 root root     15845 Mar  4 02:37 start_atlas.sh
2026-03-04 15:49:59 (95477): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-04 15:49:59 (95477): VM Completion File Detected.
2026-03-04 15:49:59 (95477): Powering off VM.
2026-03-04 15:49:59 (95477): Successfully stopped VM.
2026-03-04 15:49:59 (95477): Deregistering VM. (boinc_75125f3ac0296195, slot#11)
2026-03-04 15:50:00 (95477): Removing network bandwidth throttle group from VM.
2026-03-04 15:50:00 (95477): Removing VM from VirtualBox.
2026-03-04 15:50:05 (95477): called boinc_finish(0)

</stderr_txt>
]]>

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